RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
PXMP4-203ENST00000409299 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
PXMP4-203ENST00000409299 RRP7BPQ9NSQ0 103 aa16.32■□□□□ 0.2
PXMP4-203ENST00000409299 GOLGA3Q08378 1498 aa16.31■□□□□ 0.2
PXMP4-203ENST00000409299 FAM9BQ8IZU0 186 aa16.31■□□□□ 0.2
PXMP4-203ENST00000409299 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
PXMP4-203ENST00000409299 A0A0G2JS52 829 aa16.3■□□□□ 0.2
PXMP4-203ENST00000409299 HSP90AA1P07900 732 aaKnown RBP16.3■□□□□ 0.2
PXMP4-203ENST00000409299 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
PXMP4-203ENST00000409299 TMC1Q8TDI8 760 aa16.29■□□□□ 0.2
PXMP4-203ENST00000409299 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
PXMP4-203ENST00000409299 ZBTB7CA1YPR0 619 aa16.28■□□□□ 0.2
PXMP4-203ENST00000409299 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
PXMP4-203ENST00000409299 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
PXMP4-203ENST00000409299 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
PXMP4-203ENST00000409299 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
PXMP4-203ENST00000409299 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
PXMP4-203ENST00000409299 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
PXMP4-203ENST00000409299 MIER1Q8N108 512 aa16.19■□□□□ 0.18
PXMP4-203ENST00000409299 EIF4G2P78344 907 aaKnown RBP eCLIP16.19■□□□□ 0.18
PXMP4-203ENST00000409299 DDRGK1Q96HY6 314 aa16.19■□□□□ 0.18
PXMP4-203ENST00000409299 RGL3Q3MIN7 710 aa16.19■□□□□ 0.18
PXMP4-203ENST00000409299 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
PXMP4-203ENST00000409299 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
PXMP4-203ENST00000409299 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
PXMP4-203ENST00000409299 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
PXMP4-203ENST00000409299 EIF5BO60841 1220 aaKnown RBP16.14■□□□□ 0.17
PXMP4-203ENST00000409299 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
PXMP4-203ENST00000409299 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
PXMP4-203ENST00000409299 MLECQ14165 292 aa16.13■□□□□ 0.17
PXMP4-203ENST00000409299 CUX2O14529 1486 aa16.13■□□□□ 0.17
PXMP4-203ENST00000409299 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
PXMP4-203ENST00000409299 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
PXMP4-203ENST00000409299 BECN1Q14457 450 aa16.09■□□□□ 0.17
PXMP4-203ENST00000409299 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
PXMP4-203ENST00000409299 NBR1Q14596 966 aa16.07■□□□□ 0.16
PXMP4-203ENST00000409299 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
PXMP4-203ENST00000409299 CCNB3Q8WWL7 1395 aa16.05■□□□□ 0.16
PXMP4-203ENST00000409299 LMOD2Q6P5Q4 547 aa16.04■□□□□ 0.16
PXMP4-203ENST00000409299 CDCA8Q53HL2 280 aa16.03■□□□□ 0.16
PXMP4-203ENST00000409299 HIRIP3Q9BW71 556 aaPredicted RBP16.02■□□□□ 0.16
PXMP4-203ENST00000409299 POGKQ9P215 609 aa16.01■□□□□ 0.15
PXMP4-203ENST00000409299 SOGA1O94964 1423 aa16.01■□□□□ 0.15
PXMP4-203ENST00000409299 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
PXMP4-203ENST00000409299 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
PXMP4-203ENST00000409299 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
PXMP4-203ENST00000409299 PPM1GO15355 546 aaPredicted RBP15.97■□□□□ 0.15
PXMP4-203ENST00000409299 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.15
PXMP4-203ENST00000409299 KANK1Q14678 1352 aa15.96■□□□□ 0.15
PXMP4-203ENST00000409299 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.15
PXMP4-203ENST00000409299 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
PXMP4-203ENST00000409299 IRX6P78412 446 aaPredicted RBP15.95■□□□□ 0.14
PXMP4-203ENST00000409299 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
PXMP4-203ENST00000409299 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
PXMP4-203ENST00000409299 GGT6Q6P531 493 aa15.94■□□□□ 0.14
PXMP4-203ENST00000409299 HDGFP51858 240 aaKnown RBP15.94■□□□□ 0.14
PXMP4-203ENST00000409299 NCLP19338 710 aaKnown RBP15.93■□□□□ 0.14
PXMP4-203ENST00000409299 PPP4R2Q9NY27 417 aa15.93■□□□□ 0.14
PXMP4-203ENST00000409299 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
PXMP4-203ENST00000409299 ARXQ96QS3 562 aa15.93■□□□□ 0.14
PXMP4-203ENST00000409299 TRIM44Q96DX7 344 aaPredicted RBP15.9■□□□□ 0.14
PXMP4-203ENST00000409299 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
PXMP4-203ENST00000409299 KNSTRNQ9Y448 316 aa15.89■□□□□ 0.13
PXMP4-203ENST00000409299 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
PXMP4-203ENST00000409299 CHMP4BQ9H444 224 aaKnown RBP15.85■□□□□ 0.13
PXMP4-203ENST00000409299 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
PXMP4-203ENST00000409299 CCER2I3L3R5 266 aa15.84■□□□□ 0.13
PXMP4-203ENST00000409299 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
PXMP4-203ENST00000409299 MS4A1P11836 297 aa15.83■□□□□ 0.12
PXMP4-203ENST00000409299 ABCC8Q09428 1581 aa15.82■□□□□ 0.12
PXMP4-203ENST00000409299 ERICH6BQ5W0A0 696 aa15.8■□□□□ 0.12
PXMP4-203ENST00000409299 DCAF11Q8TEB1 546 aa15.8■□□□□ 0.12
PXMP4-203ENST00000409299 NOP58Q9Y2X3 529 aaKnown RBP15.79■□□□□ 0.12
PXMP4-203ENST00000409299 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
PXMP4-203ENST00000409299 SAFB2Q14151 953 aaKnown RBP eCLIP15.79■□□□□ 0.12
PXMP4-203ENST00000409299 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
PXMP4-203ENST00000409299 CYB5RLQ6IPT4 315 aa15.78■□□□□ 0.12
PXMP4-203ENST00000409299 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
PXMP4-203ENST00000409299 NUDCQ9Y266 331 aa15.77■□□□□ 0.12
PXMP4-203ENST00000409299 NPHP1O15259 732 aa15.77■□□□□ 0.11
PXMP4-203ENST00000409299 SOX12O15370 315 aa15.77■□□□□ 0.11
PXMP4-203ENST00000409299 SRPK2P78362 688 aaKnown RBP15.77■□□□□ 0.11
PXMP4-203ENST00000409299 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
PXMP4-203ENST00000409299 JPH4Q96JJ6 628 aa15.76■□□□□ 0.11
PXMP4-203ENST00000409299 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
PXMP4-203ENST00000409299 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
PXMP4-203ENST00000409299 PNNQ9H307 717 aaKnown RBP15.75■□□□□ 0.11
PXMP4-203ENST00000409299 STK26Q9P289 416 aa15.75■□□□□ 0.11
PXMP4-203ENST00000409299 TOP2AP11388 1531 aaKnown RBP15.75■□□□□ 0.11
PXMP4-203ENST00000409299 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
PXMP4-203ENST00000409299 VPS8Q8N3P4 1428 aa15.75■□□□□ 0.11
PXMP4-203ENST00000409299 SETD5Q9C0A6 1442 aa15.74■□□□□ 0.11
PXMP4-203ENST00000409299 NEUROD2Q15784 382 aa15.74■□□□□ 0.11
PXMP4-203ENST00000409299 WIZO95785 1651 aa15.74■□□□□ 0.11
PXMP4-203ENST00000409299 CDK11BP21127 795 aaKnown RBP15.73■□□□□ 0.11
PXMP4-203ENST00000409299 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
PXMP4-203ENST00000409299 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
PXMP4-203ENST00000409299 FMN1Q68DA7 1419 aa15.71■□□□□ 0.11
PXMP4-203ENST00000409299 KIF3BO15066 747 aa15.71■□□□□ 0.1
PXMP4-203ENST00000409299 PTMAP06454 111 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms