RNA–Protein interactions for RNA: ENST00000409284.1

CCDC141-202, Transcript of coiled-coil domain containing 141, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC141, Length 6,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-202ENST00000409284 CCDC180Q9P1Z9 1646 aa4.95□□□□□ -1.62
CCDC141-202ENST00000409284 BCL11AQ9H165 835 aa4.94□□□□□ -1.62
CCDC141-202ENST00000409284 DCAF1Q9Y4B6 1507 aa4.94□□□□□ -1.62
CCDC141-202ENST00000409284 SLC4A2P04920 1241 aa4.93□□□□□ -1.62
CCDC141-202ENST00000409284 CCDC9Q9Y3X0 531 aaKnown RBP4.93□□□□□ -1.62
CCDC141-202ENST00000409284 ECM2O94769 699 aaPredicted RBP4.92□□□□□ -1.62
CCDC141-202ENST00000409284 ANP32EQ9BTT0 268 aa4.92□□□□□ -1.62
CCDC141-202ENST00000409284 NPM1P06748 294 aaKnown RBP eCLIP4.92□□□□□ -1.62
CCDC141-202ENST00000409284 ANP32CO43423 234 aa4.91□□□□□ -1.62
CCDC141-202ENST00000409284 IFNLR1Q8IU57 520 aaPredicted RBP4.91□□□□□ -1.62
CCDC141-202ENST00000409284 HSP90AA1P07900 732 aaKnown RBP4.91□□□□□ -1.62
CCDC141-202ENST00000409284 CANXP27824 592 aaKnown RBP4.9□□□□□ -1.62
CCDC141-202ENST00000409284 RNF216Q9NWF9 866 aaPredicted RBP4.9□□□□□ -1.63
CCDC141-202ENST00000409284 ZCCHC6Q5VYS8 1495 aaKnown RBP4.9□□□□□ -1.63
CCDC141-202ENST00000409284 NAP1L5Q96NT1 182 aaPredicted RBP4.89□□□□□ -1.63
CCDC141-202ENST00000409284 HMGB1P09429 215 aaKnown RBP4.88□□□□□ -1.63
CCDC141-202ENST00000409284 RSPH6AQ9H0K4 717 aa4.88□□□□□ -1.63
CCDC141-202ENST00000409284 CHGAP10645 457 aaKnown RBP4.88□□□□□ -1.63
CCDC141-202ENST00000409284 TRIM44Q96DX7 344 aaPredicted RBP4.88□□□□□ -1.63
CCDC141-202ENST00000409284 ERICH6BQ5W0A0 696 aa4.87□□□□□ -1.63
CCDC141-202ENST00000409284 ZBTB7CA1YPR0 619 aa4.87□□□□□ -1.63
CCDC141-202ENST00000409284 UPF2Q9HAU5 1272 aaKnown RBP4.86□□□□□ -1.63
CCDC141-202ENST00000409284 MYO15BQ96JP2 1530 aa4.86□□□□□ -1.63
CCDC141-202ENST00000409284 LOC105371045A0A1W2PR82 267 aa4.86□□□□□ -1.63
CCDC141-202ENST00000409284 NEFMP07197 916 aa4.86□□□□□ -1.63
CCDC141-202ENST00000409284 NEUROD1Q13562 356 aa4.86□□□□□ -1.63
CCDC141-202ENST00000409284 NCLP19338 710 aaKnown RBP4.83□□□□□ -1.64
CCDC141-202ENST00000409284 PROM2Q8N271 834 aa4.82□□□□□ -1.64
CCDC141-202ENST00000409284 DNTTIP2Q5QJE6 756 aaKnown RBP4.82□□□□□ -1.64
CCDC141-202ENST00000409284 SPOCK2Q92563 424 aa4.82□□□□□ -1.64
CCDC141-202ENST00000409284 SPDYE4A6NLX3 237 aa4.82□□□□□ -1.64
CCDC141-202ENST00000409284 BRPF1P55201 1214 aaPredicted RBP4.82□□□□□ -1.64
CCDC141-202ENST00000409284 P3H3Q8IVL6 736 aa4.81□□□□□ -1.64
CCDC141-202ENST00000409284 CCDC136Q96JN2 1154 aa4.81□□□□□ -1.64
CCDC141-202ENST00000409284 PDIA4P13667 645 aaKnown RBP4.81□□□□□ -1.64
CCDC141-202ENST00000409284 NEUROD2Q15784 382 aa4.81□□□□□ -1.64
CCDC141-202ENST00000409284 ZMYND15Q9H091 742 aa4.81□□□□□ -1.64
CCDC141-202ENST00000409284 PTMAP06454 111 aaKnown RBP4.8□□□□□ -1.64
CCDC141-202ENST00000409284 RGL2O15211 777 aa4.8□□□□□ -1.64
CCDC141-202ENST00000409284 LMOD2Q6P5Q4 547 aa4.79□□□□□ -1.64
CCDC141-202ENST00000409284 ARID4BQ4LE39 1312 aaPredicted RBP4.79□□□□□ -1.64
CCDC141-202ENST00000409284 ZNF326Q5BKZ1 582 aaKnown RBP4.79□□□□□ -1.64
CCDC141-202ENST00000409284 HNRNPUQ00839 825 aaKnown RBP eCLIP4.78□□□□□ -1.64
CCDC141-202ENST00000409284 DEKP35659 375 aaKnown RBP4.78□□□□□ -1.64
CCDC141-202ENST00000409284 DDRGK1Q96HY6 314 aa4.78□□□□□ -1.64
CCDC141-202ENST00000409284 TRIM52Q96A61 297 aa4.78□□□□□ -1.64
CCDC141-202ENST00000409284 PPM1GO15355 546 aaPredicted RBP4.77□□□□□ -1.65
CCDC141-202ENST00000409284 TNNT3P45378 269 aaPredicted RBP4.77□□□□□ -1.65
CCDC141-202ENST00000409284 HSP90B1P14625 803 aaKnown RBP4.76□□□□□ -1.65
CCDC141-202ENST00000409284 GOLGA6L22H0YM25 854 aa4.76□□□□□ -1.65
CCDC141-202ENST00000409284 IRX6P78412 446 aaPredicted RBP4.76□□□□□ -1.65
CCDC141-202ENST00000409284 LAS1LQ9Y4W2 734 aaKnown RBP4.76□□□□□ -1.65
CCDC141-202ENST00000409284 FAM50AQ14320 339 aaKnown RBP4.76□□□□□ -1.65
CCDC141-202ENST00000409284 BECN1Q14457 450 aa4.76□□□□□ -1.65
CCDC141-202ENST00000409284 SAMD1Q6SPF0 538 aaPredicted RBP4.75□□□□□ -1.65
CCDC141-202ENST00000409284 ARID3AQ99856 593 aa4.75□□□□□ -1.65
CCDC141-202ENST00000409284 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.74□□□□□ -1.65
CCDC141-202ENST00000409284 FAM9BQ8IZU0 186 aa4.74□□□□□ -1.65
CCDC141-202ENST00000409284 NOP58Q9Y2X3 529 aaKnown RBP4.74□□□□□ -1.65
CCDC141-202ENST00000409284 HOXD11P31277 338 aaPredicted RBP4.73□□□□□ -1.65
CCDC141-202ENST00000409284 KCTD17Q8N5Z5 321 aa4.73□□□□□ -1.65
CCDC141-202ENST00000409284 MAPK8IP2Q13387 824 aaPredicted RBP4.73□□□□□ -1.65
CCDC141-202ENST00000409284 CALRP27797 417 aaKnown RBP4.72□□□□□ -1.65
CCDC141-202ENST00000409284 HS6ST3Q8IZP7 471 aa4.72□□□□□ -1.65
CCDC141-202ENST00000409284 SALL2Q9Y467 1007 aaPredicted RBP4.72□□□□□ -1.65
CCDC141-202ENST00000409284 RAD21O60216 631 aa4.72□□□□□ -1.65
CCDC141-202ENST00000409284 CHAF1AQ13111 956 aaPredicted RBP4.71□□□□□ -1.66
CCDC141-202ENST00000409284 MSNP26038 577 aaKnown RBP4.71□□□□□ -1.66
CCDC141-202ENST00000409284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.71□□□□□ -1.66
CCDC141-202ENST00000409284 A0A0U1RQG5 324 aaPredicted RBP4.71□□□□□ -1.66
CCDC141-202ENST00000409284 PNNQ9H307 717 aaKnown RBP4.71□□□□□ -1.66
CCDC141-202ENST00000409284 ZRSR1Q15695 479 aaKnown RBP4.7□□□□□ -1.66
CCDC141-202ENST00000409284 DDX10Q13206 875 aaKnown RBP4.7□□□□□ -1.66
CCDC141-202ENST00000409284 L1TD1Q5T7N2 865 aaKnown RBP4.7□□□□□ -1.66
CCDC141-202ENST00000409284 APBB1O00213 710 aa4.69□□□□□ -1.66
CCDC141-202ENST00000409284 HSP90AA2PQ14568 343 aaPredicted RBP4.69□□□□□ -1.66
CCDC141-202ENST00000409284 NECTIN2Q92692 538 aa4.69□□□□□ -1.66
CCDC141-202ENST00000409284 MIER1Q8N108 512 aa4.68□□□□□ -1.66
CCDC141-202ENST00000409284 ATF5Q9Y2D1 282 aaPredicted RBP4.68□□□□□ -1.66
CCDC141-202ENST00000409284 PLCD3Q8N3E9 789 aa4.68□□□□□ -1.66
CCDC141-202ENST00000409284 RYDENQ9NUL5 291 aaKnown RBP4.68□□□□□ -1.66
CCDC141-202ENST00000409284 GOLGA6L6A8MZA4 724 aa4.67□□□□□ -1.66
CCDC141-202ENST00000409284 CIZ1Q9ULV3 898 aaPredicted RBP4.67□□□□□ -1.66
CCDC141-202ENST00000409284 NRDCO43847 1150 aa4.66□□□□□ -1.66
CCDC141-202ENST00000409284 TMCO4Q5TGY1 634 aa4.66□□□□□ -1.66
CCDC141-202ENST00000409284 PTMSP20962 102 aa4.66□□□□□ -1.66
CCDC141-202ENST00000409284 PKNOX2Q96KN3 472 aa4.66□□□□□ -1.66
CCDC141-202ENST00000409284 C1orf115Q9H7X2 142 aa4.66□□□□□ -1.66
CCDC141-202ENST00000409284 MRS2Q9HD23 443 aa4.66□□□□□ -1.66
CCDC141-202ENST00000409284 PUS7Q96PZ0 661 aaKnown RBP4.65□□□□□ -1.66
CCDC141-202ENST00000409284 TMC1Q8TDI8 760 aa4.65□□□□□ -1.66
CCDC141-202ENST00000409284 MYH16Q9H6N6 1097 aa4.65□□□□□ -1.66
CCDC141-202ENST00000409284 GTPBP6O43824 516 aaPredicted RBP4.65□□□□□ -1.67
CCDC141-202ENST00000409284 APPP05067 770 aa4.65□□□□□ -1.67
CCDC141-202ENST00000409284 ZNF219Q9P2Y4 722 aaPredicted RBP4.65□□□□□ -1.67
CCDC141-202ENST00000409284 WDR70Q9NW82 654 aa4.64□□□□□ -1.67
CCDC141-202ENST00000409284 IGSF3O75054 1194 aa4.64□□□□□ -1.67
CCDC141-202ENST00000409284 RBM19Q9Y4C8 960 aaKnown RBP4.64□□□□□ -1.67
CCDC141-202ENST00000409284 SUPT16HQ9Y5B9 1047 aaKnown RBP4.64□□□□□ -1.67
CCDC141-202ENST00000409284 ZC3H15Q8WU90 426 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms