RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 CEP164Q9UPV0 1460 aa20.47■□□□□ 0.87
ITSN2-203ENST00000406921 CUX2O14529 1486 aa20.46■□□□□ 0.87
ITSN2-203ENST00000406921 CCDC88BA6NC98 1476 aa20.45■□□□□ 0.87
ITSN2-203ENST00000406921 ACIN1Q9UKV3 1341 aaKnown RBP20.45■□□□□ 0.86
ITSN2-203ENST00000406921 CARMIL1Q5VZK9 1371 aa20.44■□□□□ 0.86
ITSN2-203ENST00000406921 ZBTB47Q9UFB7 747 aaPredicted RBP20.41■□□□□ 0.86
ITSN2-203ENST00000406921 ABCC8Q09428 1581 aa20.39■□□□□ 0.86
ITSN2-203ENST00000406921 PLEKHG5O94827 1062 aa20.39■□□□□ 0.86
ITSN2-203ENST00000406921 TDRD9Q8NDG6 1382 aaKnown RBP20.39■□□□□ 0.85
ITSN2-203ENST00000406921 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
ITSN2-203ENST00000406921 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
ITSN2-203ENST00000406921 MIER1Q8N108 512 aa20.36■□□□□ 0.85
ITSN2-203ENST00000406921 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
ITSN2-203ENST00000406921 MRS2Q9HD23 443 aa20.33■□□□□ 0.85
ITSN2-203ENST00000406921 FKBP8Q14318 412 aa20.33■□□□□ 0.84
ITSN2-203ENST00000406921 EIF4G2P78344 907 aaKnown RBP eCLIP20.32■□□□□ 0.84
ITSN2-203ENST00000406921 MYT1Q01538 1121 aa20.32■□□□□ 0.84
ITSN2-203ENST00000406921 ARID4BQ4LE39 1312 aaPredicted RBP20.32■□□□□ 0.84
ITSN2-203ENST00000406921 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
ITSN2-203ENST00000406921 RTL5Q5HYW3 569 aaPredicted RBP20.29■□□□□ 0.84
ITSN2-203ENST00000406921 PPP1R15AO75807 674 aaPredicted RBP20.27■□□□□ 0.84
ITSN2-203ENST00000406921 KANK4Q5T7N3 995 aaPredicted RBP20.25■□□□□ 0.83
ITSN2-203ENST00000406921 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
ITSN2-203ENST00000406921 WIZO95785 1651 aa20.23■□□□□ 0.83
ITSN2-203ENST00000406921 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
ITSN2-203ENST00000406921 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
ITSN2-203ENST00000406921 WDR43Q15061 677 aaKnown RBP eCLIP20.18■□□□□ 0.82
ITSN2-203ENST00000406921 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
ITSN2-203ENST00000406921 NPM2Q86SE8 214 aaKnown RBP20.17■□□□□ 0.82
ITSN2-203ENST00000406921 IRX6P78412 446 aaPredicted RBP20.17■□□□□ 0.82
ITSN2-203ENST00000406921 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
ITSN2-203ENST00000406921 MLECQ14165 292 aa20.15■□□□□ 0.82
ITSN2-203ENST00000406921 CADPSQ9ULU8 1353 aa20.14■□□□□ 0.82
ITSN2-203ENST00000406921 ZBTB7CA1YPR0 619 aa20.14■□□□□ 0.82
ITSN2-203ENST00000406921 CARD11Q9BXL7 1154 aa20.14■□□□□ 0.82
ITSN2-203ENST00000406921 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
ITSN2-203ENST00000406921 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
ITSN2-203ENST00000406921 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
ITSN2-203ENST00000406921 FOXD1Q16676 465 aa20.09■□□□□ 0.81
ITSN2-203ENST00000406921 A0A0G2JS52 829 aa20.07■□□□□ 0.8
ITSN2-203ENST00000406921 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
ITSN2-203ENST00000406921 PPM1GO15355 546 aaPredicted RBP20.05■□□□□ 0.8
ITSN2-203ENST00000406921 GGT6Q6P531 493 aa20.04■□□□□ 0.8
ITSN2-203ENST00000406921 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
ITSN2-203ENST00000406921 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
ITSN2-203ENST00000406921 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
ITSN2-203ENST00000406921 TNNT2P45379 298 aaPredicted RBP19.98■□□□□ 0.79
ITSN2-203ENST00000406921 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
ITSN2-203ENST00000406921 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
ITSN2-203ENST00000406921 ANP32AP39687 249 aaKnown RBP19.96■□□□□ 0.79
ITSN2-203ENST00000406921 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
ITSN2-203ENST00000406921 POGKQ9P215 609 aa19.95■□□□□ 0.78
ITSN2-203ENST00000406921 FHOD3Q2V2M9 1422 aa19.95■□□□□ 0.78
ITSN2-203ENST00000406921 PKD2Q13563 968 aa19.95■□□□□ 0.78
ITSN2-203ENST00000406921 JPH4Q96JJ6 628 aa19.95■□□□□ 0.78
ITSN2-203ENST00000406921 CARMIL2Q6F5E8 1435 aa19.94■□□□□ 0.78
ITSN2-203ENST00000406921 SAFB2Q14151 953 aaKnown RBP eCLIP19.94■□□□□ 0.78
ITSN2-203ENST00000406921 LMOD2Q6P5Q4 547 aa19.93■□□□□ 0.78
ITSN2-203ENST00000406921 RAPGEF2Q9Y4G8 1499 aa19.93■□□□□ 0.78
ITSN2-203ENST00000406921 SMARCA4P51532 1647 aa19.9■□□□□ 0.78
ITSN2-203ENST00000406921 CC2D1BQ5T0F9 858 aaKnown RBP19.89■□□□□ 0.77
ITSN2-203ENST00000406921 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.88■□□□□ 0.77
ITSN2-203ENST00000406921 ARHGAP35Q9NRY4 1499 aa19.88■□□□□ 0.77
ITSN2-203ENST00000406921 HNRNPMP52272 730 aaKnown RBP eCLIP19.88■□□□□ 0.77
ITSN2-203ENST00000406921 CDCA8Q53HL2 280 aa19.88■□□□□ 0.77
ITSN2-203ENST00000406921 EFCAB2Q5VUJ9 269 aa19.86■□□□□ 0.77
ITSN2-203ENST00000406921 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
ITSN2-203ENST00000406921 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
ITSN2-203ENST00000406921 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
ITSN2-203ENST00000406921 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
ITSN2-203ENST00000406921 SOX12O15370 315 aa19.83■□□□□ 0.77
ITSN2-203ENST00000406921 STK26Q9P289 416 aa19.82■□□□□ 0.76
ITSN2-203ENST00000406921 HSP90AA1P07900 732 aaKnown RBP19.82■□□□□ 0.76
ITSN2-203ENST00000406921 RAB3GAP2Q9H2M9 1393 aa19.82■□□□□ 0.76
ITSN2-203ENST00000406921 CFAP53Q96M91 514 aa19.81■□□□□ 0.76
ITSN2-203ENST00000406921 MPHOSPH9Q99550 1183 aa19.81■□□□□ 0.76
ITSN2-203ENST00000406921 NUP155O75694 1391 aa19.81■□□□□ 0.76
ITSN2-203ENST00000406921 KIF3BO15066 747 aa19.8■□□□□ 0.76
ITSN2-203ENST00000406921 SUPT16HQ9Y5B9 1047 aaKnown RBP19.79■□□□□ 0.76
ITSN2-203ENST00000406921 KANK1Q14678 1352 aa19.78■□□□□ 0.76
ITSN2-203ENST00000406921 UPF2Q9HAU5 1272 aaKnown RBP19.76■□□□□ 0.75
ITSN2-203ENST00000406921 LAS1LQ9Y4W2 734 aaKnown RBP19.76■□□□□ 0.75
ITSN2-203ENST00000406921 HSPA5P11021 654 aaKnown RBP19.76■□□□□ 0.75
ITSN2-203ENST00000406921 SRPK2P78362 688 aaKnown RBP19.75■□□□□ 0.75
ITSN2-203ENST00000406921 U2SURPO15042 1029 aaKnown RBP19.75■□□□□ 0.75
ITSN2-203ENST00000406921 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
ITSN2-203ENST00000406921 TMF1P82094 1093 aa19.73■□□□□ 0.75
ITSN2-203ENST00000406921 NUTM2DQ5VT03 806 aaPredicted RBP19.72■□□□□ 0.75
ITSN2-203ENST00000406921 ARXQ96QS3 562 aa19.72■□□□□ 0.75
ITSN2-203ENST00000406921 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
ITSN2-203ENST00000406921 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
ITSN2-203ENST00000406921 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
ITSN2-203ENST00000406921 SPAG9O60271 1321 aaKnown RBP19.67■□□□□ 0.74
ITSN2-203ENST00000406921 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
ITSN2-203ENST00000406921 IGF1RP08069 1367 aa19.67■□□□□ 0.74
ITSN2-203ENST00000406921 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
ITSN2-203ENST00000406921 NUDCQ9Y266 331 aa19.66■□□□□ 0.74
ITSN2-203ENST00000406921 MYH16Q9H6N6 1097 aa19.65■□□□□ 0.74
ITSN2-203ENST00000406921 FRAT1Q92837 279 aaPredicted RBP19.64■□□□□ 0.74
ITSN2-203ENST00000406921 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 220.6 ms