RNA–Protein interactions for RNA: ENST00000406076.5

CLHC1-203, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLHC1, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-203ENST00000406076 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLHC1-203ENST00000406076 CLCN6P51797 869 aa9.14□□□□□ -0.95
CLHC1-203ENST00000406076 TULP1O00294 542 aaPredicted RBP9.14□□□□□ -0.95
CLHC1-203ENST00000406076 PAK3O75914 559 aaPredicted RBP9.12□□□□□ -0.95
CLHC1-203ENST00000406076 FKBP8Q14318 412 aa9.12□□□□□ -0.95
CLHC1-203ENST00000406076 POTEIP0CG38 1075 aa9.12□□□□□ -0.95
CLHC1-203ENST00000406076 HAP1P54257 671 aaPredicted RBP9.11□□□□□ -0.95
CLHC1-203ENST00000406076 PHF12Q96QT6 1004 aa9.09□□□□□ -0.95
CLHC1-203ENST00000406076 MIER1Q8N108 512 aa9.08□□□□□ -0.96
CLHC1-203ENST00000406076 GALR2O43603 387 aaPredicted RBP9.07□□□□□ -0.96
CLHC1-203ENST00000406076 DCBLD2Q96PD2 775 aa9.07□□□□□ -0.96
CLHC1-203ENST00000406076 PLEKHG5O94827 1062 aa9.04□□□□□ -0.96
CLHC1-203ENST00000406076 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
CLHC1-203ENST00000406076 LHX8Q68G74 356 aa9.02□□□□□ -0.97
CLHC1-203ENST00000406076 TSPYL2Q9H2G4 693 aaPredicted RBP9.02□□□□□ -0.97
CLHC1-203ENST00000406076 PLCD3Q8N3E9 789 aa9.01□□□□□ -0.97
CLHC1-203ENST00000406076 HOMEZQ8IX15 550 aa8.99□□□□□ -0.97
CLHC1-203ENST00000406076 CCDC61Q9Y6R9 512 aa8.97□□□□□ -0.97
CLHC1-203ENST00000406076 RASEFQ8IZ41 740 aa8.96□□□□□ -0.97
CLHC1-203ENST00000406076 MS4A3Q96HJ5 214 aa8.96□□□□□ -0.98
CLHC1-203ENST00000406076 GTF3C3Q9Y5Q9 886 aa8.94□□□□□ -0.98
CLHC1-203ENST00000406076 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
CLHC1-203ENST00000406076 KIF12Q96FN5 646 aa8.91□□□□□ -0.98
CLHC1-203ENST00000406076 ZBTB47Q9UFB7 747 aaPredicted RBP8.91□□□□□ -0.98
CLHC1-203ENST00000406076 PELP1Q8IZL8 1130 aaKnown RBP8.89□□□□□ -0.99
CLHC1-203ENST00000406076 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
CLHC1-203ENST00000406076 NUBP1P53384 320 aa8.89□□□□□ -0.99
CLHC1-203ENST00000406076 MAP3K13O43283 966 aa8.87□□□□□ -0.99
CLHC1-203ENST00000406076 ASTLQ6HA08 431 aaPredicted RBP8.87□□□□□ -0.99
CLHC1-203ENST00000406076 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
CLHC1-203ENST00000406076 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
CLHC1-203ENST00000406076 TRPC6Q9Y210 931 aa8.84□□□□□ -1
CLHC1-203ENST00000406076 KDM2AQ9Y2K7 1162 aa8.83□□□□□ -1
CLHC1-203ENST00000406076 POTEB2H3BUK9 544 aa8.82□□□□□ -1
CLHC1-203ENST00000406076 RANGAP1P46060 587 aaPredicted RBP8.82□□□□□ -1
CLHC1-203ENST00000406076 FAM212AQ96EL1 285 aa8.82□□□□□ -1
CLHC1-203ENST00000406076 ATN1P54259 1190 aaPredicted RBP8.81□□□□□ -1
CLHC1-203ENST00000406076 METRNQ9UJH8 293 aa8.81□□□□□ -1
CLHC1-203ENST00000406076 BICRAQ9NZM4 1560 aa8.8□□□□□ -1
CLHC1-203ENST00000406076 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
CLHC1-203ENST00000406076 BMP2KQ9NSY1 1161 aaPredicted RBP8.8□□□□□ -1
CLHC1-203ENST00000406076 ERICH6Q7L0X2 663 aa8.79□□□□□ -1
CLHC1-203ENST00000406076 SLC39A7Q92504 469 aa8.79□□□□□ -1
CLHC1-203ENST00000406076 UNC13AQ9UPW8 1703 aa8.79□□□□□ -1
CLHC1-203ENST00000406076 C7P10643 843 aa8.78□□□□□ -1
CLHC1-203ENST00000406076 PCDHB13Q9Y5F0 798 aa8.78□□□□□ -1
CLHC1-203ENST00000406076 TIE1P35590 1138 aa8.77□□□□□ -1.01
CLHC1-203ENST00000406076 OTUD5Q96G74 571 aa8.77□□□□□ -1.01
CLHC1-203ENST00000406076 SGIP1Q9BQI5 828 aa8.76□□□□□ -1.01
CLHC1-203ENST00000406076 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
CLHC1-203ENST00000406076 DCAF8Q5TAQ9 597 aa8.75□□□□□ -1.01
CLHC1-203ENST00000406076 IFNL1Q8IU54 200 aa8.75□□□□□ -1.01
CLHC1-203ENST00000406076 KLHL34Q8N239 644 aa8.75□□□□□ -1.01
CLHC1-203ENST00000406076 CECR2Q9BXF3 1484 aa8.75□□□□□ -1.01
CLHC1-203ENST00000406076 TTLL13PA6NNM8 815 aa8.74□□□□□ -1.01
CLHC1-203ENST00000406076 PODXL2Q9NZ53 605 aa8.73□□□□□ -1.01
CLHC1-203ENST00000406076 POTEJP0CG39 1038 aa8.71□□□□□ -1.01
CLHC1-203ENST00000406076 PYGBP11216 843 aa8.71□□□□□ -1.01
CLHC1-203ENST00000406076 CC2D2AQ9P2K1 1620 aa8.71□□□□□ -1.02
CLHC1-203ENST00000406076 DCAF8L2P0C7V8 631 aa8.7□□□□□ -1.02
CLHC1-203ENST00000406076 POTEFA5A3E0 1075 aa8.69□□□□□ -1.02
CLHC1-203ENST00000406076 TRIM35Q9UPQ4 493 aa8.69□□□□□ -1.02
CLHC1-203ENST00000406076 NACADO15069 1562 aa8.68□□□□□ -1.02
CLHC1-203ENST00000406076 TMEM106CQ9BVX2 250 aa8.67□□□□□ -1.02
CLHC1-203ENST00000406076 IFNLR1Q8IU57 520 aaPredicted RBP8.66□□□□□ -1.02
CLHC1-203ENST00000406076 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
CLHC1-203ENST00000406076 COLQQ9Y215 455 aaPredicted RBP8.66□□□□□ -1.02
CLHC1-203ENST00000406076 SEC24BO95487 1268 aa8.65□□□□□ -1.02
CLHC1-203ENST00000406076 GSE1Q14687 1217 aa8.65□□□□□ -1.02
CLHC1-203ENST00000406076 PCDHB8Q9UN66 801 aa8.65□□□□□ -1.02
CLHC1-203ENST00000406076 MAMSTRQ6ZN01 415 aa8.63□□□□□ -1.03
CLHC1-203ENST00000406076 IER5LQ5T953 404 aa8.63□□□□□ -1.03
CLHC1-203ENST00000406076 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
CLHC1-203ENST00000406076 SCUBE2Q9NQ36 999 aa8.61□□□□□ -1.03
CLHC1-203ENST00000406076 CHRM1P11229 460 aaPredicted RBP8.58□□□□□ -1.04
CLHC1-203ENST00000406076 ZNF467Q7Z7K2 595 aaPredicted RBP8.57□□□□□ -1.04
CLHC1-203ENST00000406076 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
CLHC1-203ENST00000406076 PLCG2P16885 1265 aa8.55□□□□□ -1.04
CLHC1-203ENST00000406076 IRX5P78411 483 aaPredicted RBP8.55□□□□□ -1.04
CLHC1-203ENST00000406076 EIF4G1Q04637 1599 aaKnown RBP8.54□□□□□ -1.04
CLHC1-203ENST00000406076 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
CLHC1-203ENST00000406076 PAXIP1Q6ZW49 1069 aaPredicted RBP8.51□□□□□ -1.05
CLHC1-203ENST00000406076 NPM2Q86SE8 214 aaKnown RBP8.51□□□□□ -1.05
CLHC1-203ENST00000406076 OCEL1Q9H607 264 aa8.51□□□□□ -1.05
CLHC1-203ENST00000406076 PSEN1P49768 467 aa8.5□□□□□ -1.05
CLHC1-203ENST00000406076 POTEMA6NI47 508 aa8.49□□□□□ -1.05
CLHC1-203ENST00000406076 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
CLHC1-203ENST00000406076 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
CLHC1-203ENST00000406076 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
CLHC1-203ENST00000406076 POTEGQ6S5H5 508 aa8.48□□□□□ -1.05
CLHC1-203ENST00000406076 FAM163AQ96GL9 167 aaPredicted RBP8.48□□□□□ -1.05
CLHC1-203ENST00000406076 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.48□□□□□ -1.05
CLHC1-203ENST00000406076 PDAP1Q13442 181 aaKnown RBP8.47□□□□□ -1.05
CLHC1-203ENST00000406076 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
CLHC1-203ENST00000406076 CUX2O14529 1486 aa8.46□□□□□ -1.05
CLHC1-203ENST00000406076 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.05
CLHC1-203ENST00000406076 PKD2Q13563 968 aa8.45□□□□□ -1.06
CLHC1-203ENST00000406076 BBXQ8WY36 941 aaPredicted RBP8.45□□□□□ -1.06
CLHC1-203ENST00000406076 TSHZ2Q9NRE2 1034 aa8.45□□□□□ -1.06
CLHC1-203ENST00000406076 NBR1Q14596 966 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms