RNA–Protein interactions for RNA: ENST00000401950.6

MTMR3-204, Transcript of myotubularin related protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MTMR3, Length 6,018 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-204ENST00000401950 HIRIP3Q9BW71 556 aaPredicted RBP18.67■□□□□ 0.58
MTMR3-204ENST00000401950 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
MTMR3-204ENST00000401950 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
MTMR3-204ENST00000401950 MIER1Q8N108 512 aa18.63■□□□□ 0.57
MTMR3-204ENST00000401950 WDR43Q15061 677 aaKnown RBP eCLIP18.63■□□□□ 0.57
MTMR3-204ENST00000401950 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
MTMR3-204ENST00000401950 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
MTMR3-204ENST00000401950 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
MTMR3-204ENST00000401950 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
MTMR3-204ENST00000401950 CCDC136Q96JN2 1154 aa18.59■□□□□ 0.57
MTMR3-204ENST00000401950 RGL3Q3MIN7 710 aa18.58■□□□□ 0.57
MTMR3-204ENST00000401950 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
MTMR3-204ENST00000401950 PPP1R15AO75807 674 aaPredicted RBP18.5■□□□□ 0.55
MTMR3-204ENST00000401950 HSP90AA1P07900 732 aaKnown RBP18.5■□□□□ 0.55
MTMR3-204ENST00000401950 CARMIL1Q5VZK9 1371 aa18.48■□□□□ 0.55
MTMR3-204ENST00000401950 CDCA8Q53HL2 280 aa18.46■□□□□ 0.55
MTMR3-204ENST00000401950 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
MTMR3-204ENST00000401950 CARD11Q9BXL7 1154 aa18.43■□□□□ 0.54
MTMR3-204ENST00000401950 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
MTMR3-204ENST00000401950 SOGA1O94964 1423 aa18.4■□□□□ 0.54
MTMR3-204ENST00000401950 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
MTMR3-204ENST00000401950 CUX2O14529 1486 aa18.4■□□□□ 0.54
MTMR3-204ENST00000401950 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
MTMR3-204ENST00000401950 ERCC6Q03468 1493 aa18.39■□□□□ 0.53
MTMR3-204ENST00000401950 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.53
MTMR3-204ENST00000401950 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
MTMR3-204ENST00000401950 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
MTMR3-204ENST00000401950 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
MTMR3-204ENST00000401950 ARID4BQ4LE39 1312 aaPredicted RBP18.33■□□□□ 0.53
MTMR3-204ENST00000401950 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
MTMR3-204ENST00000401950 ANP32BQ92688 251 aaKnown RBP18.31■□□□□ 0.52
MTMR3-204ENST00000401950 C14orf37Q86TY3 774 aa18.31■□□□□ 0.52
MTMR3-204ENST00000401950 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
MTMR3-204ENST00000401950 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
MTMR3-204ENST00000401950 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.51
MTMR3-204ENST00000401950 VPS8Q8N3P4 1428 aa18.26■□□□□ 0.51
MTMR3-204ENST00000401950 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
MTMR3-204ENST00000401950 PPM1GO15355 546 aaPredicted RBP18.23■□□□□ 0.51
MTMR3-204ENST00000401950 POGKQ9P215 609 aa18.23■□□□□ 0.51
MTMR3-204ENST00000401950 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
MTMR3-204ENST00000401950 TDRD9Q8NDG6 1382 aaKnown RBP18.22■□□□□ 0.51
MTMR3-204ENST00000401950 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
MTMR3-204ENST00000401950 ZBTB7CA1YPR0 619 aa18.21■□□□□ 0.51
MTMR3-204ENST00000401950 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
MTMR3-204ENST00000401950 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
MTMR3-204ENST00000401950 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
MTMR3-204ENST00000401950 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
MTMR3-204ENST00000401950 A0A0G2JS52 829 aa18.19■□□□□ 0.5
MTMR3-204ENST00000401950 NEUROD2Q15784 382 aa18.18■□□□□ 0.5
MTMR3-204ENST00000401950 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
MTMR3-204ENST00000401950 TMF1P82094 1093 aa18.15■□□□□ 0.5
MTMR3-204ENST00000401950 MAPK8IP3Q9UPT6 1336 aa18.15■□□□□ 0.5
MTMR3-204ENST00000401950 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
MTMR3-204ENST00000401950 CARMIL2Q6F5E8 1435 aa18.14■□□□□ 0.49
MTMR3-204ENST00000401950 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
MTMR3-204ENST00000401950 PKD2Q13563 968 aa18.13■□□□□ 0.49
MTMR3-204ENST00000401950 KANK1Q14678 1352 aa18.12■□□□□ 0.49
MTMR3-204ENST00000401950 NBR1Q14596 966 aa18.11■□□□□ 0.49
MTMR3-204ENST00000401950 EFCAB2Q5VUJ9 269 aa18.11■□□□□ 0.49
MTMR3-204ENST00000401950 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
MTMR3-204ENST00000401950 HAP1P54257 671 aaPredicted RBP18.1■□□□□ 0.49
MTMR3-204ENST00000401950 FMN1Q68DA7 1419 aa18.1■□□□□ 0.49
MTMR3-204ENST00000401950 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
MTMR3-204ENST00000401950 GGT6Q6P531 493 aa18.09■□□□□ 0.49
MTMR3-204ENST00000401950 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
MTMR3-204ENST00000401950 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.49
MTMR3-204ENST00000401950 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.49
MTMR3-204ENST00000401950 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.48
MTMR3-204ENST00000401950 HDGFP51858 240 aaKnown RBP18.07■□□□□ 0.48
MTMR3-204ENST00000401950 LMOD2Q6P5Q4 547 aa18.07■□□□□ 0.48
MTMR3-204ENST00000401950 BECN1Q14457 450 aa18.06■□□□□ 0.48
MTMR3-204ENST00000401950 MLECQ14165 292 aa18.05■□□□□ 0.48
MTMR3-204ENST00000401950 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
MTMR3-204ENST00000401950 PPP4R2Q9NY27 417 aa18.04■□□□□ 0.48
MTMR3-204ENST00000401950 MPHOSPH9Q99550 1183 aa18.03■□□□□ 0.48
MTMR3-204ENST00000401950 CCER2I3L3R5 266 aa18.02■□□□□ 0.48
MTMR3-204ENST00000401950 HSPA5P11021 654 aaKnown RBP18.02■□□□□ 0.48
MTMR3-204ENST00000401950 DDRGK1Q96HY6 314 aa18.02■□□□□ 0.48
MTMR3-204ENST00000401950 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
MTMR3-204ENST00000401950 FOXD1Q16676 465 aa18.02■□□□□ 0.47
MTMR3-204ENST00000401950 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
MTMR3-204ENST00000401950 NUP155O75694 1391 aa18.01■□□□□ 0.47
MTMR3-204ENST00000401950 SRPK2P78362 688 aaKnown RBP18■□□□□ 0.47
MTMR3-204ENST00000401950 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
MTMR3-204ENST00000401950 ARXQ96QS3 562 aa17.99■□□□□ 0.47
MTMR3-204ENST00000401950 MS4A1P11836 297 aa17.98■□□□□ 0.47
MTMR3-204ENST00000401950 PNNQ9H307 717 aaKnown RBP17.98■□□□□ 0.47
MTMR3-204ENST00000401950 CHMP4BQ9H444 224 aaKnown RBP17.98■□□□□ 0.47
MTMR3-204ENST00000401950 EIF5BO60841 1220 aaKnown RBP17.98■□□□□ 0.47
MTMR3-204ENST00000401950 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
MTMR3-204ENST00000401950 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
MTMR3-204ENST00000401950 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
MTMR3-204ENST00000401950 RSPH4AQ5TD94 716 aa17.96■□□□□ 0.47
MTMR3-204ENST00000401950 SAFB2Q14151 953 aaKnown RBP eCLIP17.96■□□□□ 0.47
MTMR3-204ENST00000401950 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
MTMR3-204ENST00000401950 RGS3P49796 1198 aa17.95■□□□□ 0.46
MTMR3-204ENST00000401950 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
MTMR3-204ENST00000401950 TOP2AP11388 1531 aaKnown RBP17.94■□□□□ 0.46
MTMR3-204ENST00000401950 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
MTMR3-204ENST00000401950 ANP32EQ9BTT0 268 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 379 ms