RNA–Protein interactions for RNA: ENST00000399788.6

KDM5A-201, Transcript of lysine demethylase 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM5A, Length 10,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-201ENST00000399788 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
KDM5A-201ENST00000399788 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
KDM5A-201ENST00000399788 CSRNP3Q8WYN3 585 aa10.94□□□□□ -0.66
KDM5A-201ENST00000399788 PPM1GO15355 546 aaPredicted RBP10.94□□□□□ -0.66
KDM5A-201ENST00000399788 CCDC136Q96JN2 1154 aa10.92□□□□□ -0.66
KDM5A-201ENST00000399788 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
KDM5A-201ENST00000399788 CLSTN1O94985 981 aa10.9□□□□□ -0.66
KDM5A-201ENST00000399788 FKBP8Q14318 412 aa10.89□□□□□ -0.67
KDM5A-201ENST00000399788 GLIPR1L2Q4G1C9 344 aa10.88□□□□□ -0.67
KDM5A-201ENST00000399788 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
KDM5A-201ENST00000399788 DDX10Q13206 875 aaKnown RBP10.88□□□□□ -0.67
KDM5A-201ENST00000399788 CASC1Q6TDU7 716 aa10.87□□□□□ -0.67
KDM5A-201ENST00000399788 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
KDM5A-201ENST00000399788 TPRNQ4KMQ1 711 aa10.85□□□□□ -0.67
KDM5A-201ENST00000399788 LAS1LQ9Y4W2 734 aaKnown RBP10.85□□□□□ -0.67
KDM5A-201ENST00000399788 GOLGA6L22H0YM25 854 aa10.84□□□□□ -0.67
KDM5A-201ENST00000399788 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
KDM5A-201ENST00000399788 MTUS2Q5JR59 1369 aa10.84□□□□□ -0.67
KDM5A-201ENST00000399788 POGKQ9P215 609 aa10.84□□□□□ -0.67
KDM5A-201ENST00000399788 FGD1P98174 961 aa10.84□□□□□ -0.67
KDM5A-201ENST00000399788 MRS2Q9HD23 443 aa10.84□□□□□ -0.67
KDM5A-201ENST00000399788 RGL3Q3MIN7 710 aa10.83□□□□□ -0.68
KDM5A-201ENST00000399788 PLEKHD1A6NEE1 506 aa10.83□□□□□ -0.68
KDM5A-201ENST00000399788 OS9Q13438 667 aaPredicted RBP10.83□□□□□ -0.68
KDM5A-201ENST00000399788 NAP1L2Q9ULW6 460 aaPredicted RBP10.82□□□□□ -0.68
KDM5A-201ENST00000399788 BECN1Q14457 450 aa10.81□□□□□ -0.68
KDM5A-201ENST00000399788 TMX4Q9H1E5 349 aaPredicted RBP10.81□□□□□ -0.68
KDM5A-201ENST00000399788 TRIM44Q96DX7 344 aaPredicted RBP10.8□□□□□ -0.68
KDM5A-201ENST00000399788 FTSJ3Q8IY81 847 aaKnown RBP10.8□□□□□ -0.68
KDM5A-201ENST00000399788 NBR1Q14596 966 aa10.8□□□□□ -0.68
KDM5A-201ENST00000399788 PTMAP06454 111 aaKnown RBP10.8□□□□□ -0.68
KDM5A-201ENST00000399788 CDCA8Q53HL2 280 aa10.79□□□□□ -0.68
KDM5A-201ENST00000399788 MAPK8IP3Q9UPT6 1336 aa10.79□□□□□ -0.68
KDM5A-201ENST00000399788 KCNJ4P48050 445 aa10.79□□□□□ -0.68
KDM5A-201ENST00000399788 PRM3Q9NNZ6 103 aa10.77□□□□□ -0.68
KDM5A-201ENST00000399788 NUDCQ9Y266 331 aa10.77□□□□□ -0.69
KDM5A-201ENST00000399788 KNSTRNQ9Y448 316 aa10.77□□□□□ -0.69
KDM5A-201ENST00000399788 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
KDM5A-201ENST00000399788 MLECQ14165 292 aa10.77□□□□□ -0.69
KDM5A-201ENST00000399788 DNTTIP2Q5QJE6 756 aaKnown RBP10.75□□□□□ -0.69
KDM5A-201ENST00000399788 RRP7BPQ9NSQ0 103 aa10.75□□□□□ -0.69
KDM5A-201ENST00000399788 CCDC9Q9Y3X0 531 aaKnown RBP10.75□□□□□ -0.69
KDM5A-201ENST00000399788 ANP32EQ9BTT0 268 aa10.74□□□□□ -0.69
KDM5A-201ENST00000399788 NEUROD2Q15784 382 aa10.74□□□□□ -0.69
KDM5A-201ENST00000399788 SOX12O15370 315 aa10.74□□□□□ -0.69
KDM5A-201ENST00000399788 GOLGA6L6A8MZA4 724 aa10.73□□□□□ -0.69
KDM5A-201ENST00000399788 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
KDM5A-201ENST00000399788 SCRIBQ14160 1630 aa10.71□□□□□ -0.7
KDM5A-201ENST00000399788 DDRGK1Q96HY6 314 aa10.71□□□□□ -0.7
KDM5A-201ENST00000399788 PNNQ9H307 717 aaKnown RBP10.7□□□□□ -0.7
KDM5A-201ENST00000399788 G3V3G9 751 aa10.7□□□□□ -0.7
KDM5A-201ENST00000399788 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
KDM5A-201ENST00000399788 NRDCO43847 1150 aa10.7□□□□□ -0.7
KDM5A-201ENST00000399788 TNNT2P45379 298 aaPredicted RBP10.7□□□□□ -0.7
KDM5A-201ENST00000399788 U2SURPO15042 1029 aaKnown RBP10.7□□□□□ -0.7
KDM5A-201ENST00000399788 KRI1Q8N9T8 703 aaKnown RBP10.69□□□□□ -0.7
KDM5A-201ENST00000399788 CHMP4BQ9H444 224 aaKnown RBP10.69□□□□□ -0.7
KDM5A-201ENST00000399788 ZNF330Q9Y3S2 320 aaPredicted RBP10.69□□□□□ -0.7
KDM5A-201ENST00000399788 CSB-PGBD3P0DP91 1061 aa10.68□□□□□ -0.7
KDM5A-201ENST00000399788 IRX6P78412 446 aaPredicted RBP10.68□□□□□ -0.7
KDM5A-201ENST00000399788 CFDP1Q9UEE9 299 aaPredicted RBP10.68□□□□□ -0.7
KDM5A-201ENST00000399788 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
KDM5A-201ENST00000399788 HIRIP3Q9BW71 556 aaPredicted RBP10.67□□□□□ -0.7
KDM5A-201ENST00000399788 GOLGA6L4A6NEF3 574 aa10.67□□□□□ -0.7
KDM5A-201ENST00000399788 PAK3O75914 559 aaPredicted RBP10.66□□□□□ -0.7
KDM5A-201ENST00000399788 GNL2Q13823 731 aaKnown RBP10.66□□□□□ -0.7
KDM5A-201ENST00000399788 ACIN1Q9UKV3 1341 aaKnown RBP10.66□□□□□ -0.7
KDM5A-201ENST00000399788 AEBP2Q6ZN18 517 aaPredicted RBP10.65□□□□□ -0.7
KDM5A-201ENST00000399788 RTF1Q92541 710 aaKnown RBP10.65□□□□□ -0.7
KDM5A-201ENST00000399788 RSF1Q96T23 1441 aaPredicted RBP10.64□□□□□ -0.71
KDM5A-201ENST00000399788 FRAT1Q92837 279 aaPredicted RBP10.64□□□□□ -0.71
KDM5A-201ENST00000399788 L1TD1Q5T7N2 865 aaKnown RBP10.64□□□□□ -0.71
KDM5A-201ENST00000399788 CARD11Q9BXL7 1154 aa10.64□□□□□ -0.71
KDM5A-201ENST00000399788 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
KDM5A-201ENST00000399788 KIAA2012Q0VF49 1180 aa10.63□□□□□ -0.71
KDM5A-201ENST00000399788 MS4A1P11836 297 aa10.62□□□□□ -0.71
KDM5A-201ENST00000399788 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
KDM5A-201ENST00000399788 HSP90AB1P08238 724 aaKnown RBP10.62□□□□□ -0.71
KDM5A-201ENST00000399788 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
KDM5A-201ENST00000399788 KANK1Q14678 1352 aa10.61□□□□□ -0.71
KDM5A-201ENST00000399788 MCCP23508 829 aa10.59□□□□□ -0.71
KDM5A-201ENST00000399788 SAFB2Q14151 953 aaKnown RBP eCLIP10.59□□□□□ -0.71
KDM5A-201ENST00000399788 TAF7LQ5H9L4 462 aa10.58□□□□□ -0.72
KDM5A-201ENST00000399788 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
KDM5A-201ENST00000399788 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
KDM5A-201ENST00000399788 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
KDM5A-201ENST00000399788 NOC3LQ8WTT2 800 aaKnown RBP10.57□□□□□ -0.72
KDM5A-201ENST00000399788 GTF2E1P29083 439 aaPredicted RBP10.57□□□□□ -0.72
KDM5A-201ENST00000399788 STK26Q9P289 416 aa10.56□□□□□ -0.72
KDM5A-201ENST00000399788 CC2D1BQ5T0F9 858 aaKnown RBP10.56□□□□□ -0.72
KDM5A-201ENST00000399788 DRC7Q8IY82 874 aa10.55□□□□□ -0.72
KDM5A-201ENST00000399788 KIAA1211Q6ZU35 1233 aa10.55□□□□□ -0.72
KDM5A-201ENST00000399788 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
KDM5A-201ENST00000399788 RGS3P49796 1198 aa10.55□□□□□ -0.72
KDM5A-201ENST00000399788 GGT6Q6P531 493 aa10.55□□□□□ -0.72
KDM5A-201ENST00000399788 MSH5O43196 834 aa10.54□□□□□ -0.72
KDM5A-201ENST00000399788 FRAT2O75474 233 aaPredicted RBP10.54□□□□□ -0.72
KDM5A-201ENST00000399788 PDE4CQ08493 712 aa10.54□□□□□ -0.72
KDM5A-201ENST00000399788 HDGFL2Q7Z4V5 671 aaPredicted RBP10.53□□□□□ -0.72
KDM5A-201ENST00000399788 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms