RNA–Protein interactions for RNA: ENST00000399634.5

CACNA1C-214, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-214ENST00000399634 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
CACNA1C-214ENST00000399634 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
CACNA1C-214ENST00000399634 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
CACNA1C-214ENST00000399634 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
CACNA1C-214ENST00000399634 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
CACNA1C-214ENST00000399634 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.84■□□□□ 0.45
CACNA1C-214ENST00000399634 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
CACNA1C-214ENST00000399634 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
CACNA1C-214ENST00000399634 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
CACNA1C-214ENST00000399634 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
CACNA1C-214ENST00000399634 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
CACNA1C-214ENST00000399634 HSP90AA1P07900 732 aaKnown RBP17.76■□□□□ 0.43
CACNA1C-214ENST00000399634 RGL3Q3MIN7 710 aa17.72■□□□□ 0.43
CACNA1C-214ENST00000399634 IRX6P78412 446 aaPredicted RBP17.71■□□□□ 0.43
CACNA1C-214ENST00000399634 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
CACNA1C-214ENST00000399634 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
CACNA1C-214ENST00000399634 ANP32BQ92688 251 aaKnown RBP17.65■□□□□ 0.42
CACNA1C-214ENST00000399634 SOGA1O94964 1423 aa17.64■□□□□ 0.41
CACNA1C-214ENST00000399634 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
CACNA1C-214ENST00000399634 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
CACNA1C-214ENST00000399634 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
CACNA1C-214ENST00000399634 CDCA8Q53HL2 280 aa17.62■□□□□ 0.41
CACNA1C-214ENST00000399634 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
CACNA1C-214ENST00000399634 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
CACNA1C-214ENST00000399634 CCNB3Q8WWL7 1395 aa17.6■□□□□ 0.41
CACNA1C-214ENST00000399634 CUX2O14529 1486 aa17.6■□□□□ 0.41
CACNA1C-214ENST00000399634 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
CACNA1C-214ENST00000399634 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
CACNA1C-214ENST00000399634 ERCC6Q03468 1493 aa17.57■□□□□ 0.4
CACNA1C-214ENST00000399634 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
CACNA1C-214ENST00000399634 NBR1Q14596 966 aa17.53■□□□□ 0.4
CACNA1C-214ENST00000399634 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
CACNA1C-214ENST00000399634 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
CACNA1C-214ENST00000399634 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
CACNA1C-214ENST00000399634 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
CACNA1C-214ENST00000399634 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
CACNA1C-214ENST00000399634 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
CACNA1C-214ENST00000399634 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
CACNA1C-214ENST00000399634 TIMELESSQ9UNS1 1208 aa17.48■□□□□ 0.39
CACNA1C-214ENST00000399634 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
CACNA1C-214ENST00000399634 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
CACNA1C-214ENST00000399634 PLEKHG5O94827 1062 aa17.43■□□□□ 0.38
CACNA1C-214ENST00000399634 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
CACNA1C-214ENST00000399634 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
CACNA1C-214ENST00000399634 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
CACNA1C-214ENST00000399634 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
CACNA1C-214ENST00000399634 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
CACNA1C-214ENST00000399634 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
CACNA1C-214ENST00000399634 POGKQ9P215 609 aa17.4■□□□□ 0.38
CACNA1C-214ENST00000399634 DCAF11Q8TEB1 546 aa17.4■□□□□ 0.38
CACNA1C-214ENST00000399634 BECN1Q14457 450 aa17.4■□□□□ 0.38
CACNA1C-214ENST00000399634 ARHGAP35Q9NRY4 1499 aa17.4■□□□□ 0.38
CACNA1C-214ENST00000399634 NEUROD2Q15784 382 aa17.39■□□□□ 0.38
CACNA1C-214ENST00000399634 NUDCQ9Y266 331 aa17.39■□□□□ 0.38
CACNA1C-214ENST00000399634 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
CACNA1C-214ENST00000399634 SMARCA2P51531 1590 aa17.38■□□□□ 0.37
CACNA1C-214ENST00000399634 ARXQ96QS3 562 aa17.38■□□□□ 0.37
CACNA1C-214ENST00000399634 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
CACNA1C-214ENST00000399634 TMF1P82094 1093 aa17.37■□□□□ 0.37
CACNA1C-214ENST00000399634 A0A0G2JS52 829 aa17.37■□□□□ 0.37
CACNA1C-214ENST00000399634 PPP4R2Q9NY27 417 aa17.36■□□□□ 0.37
CACNA1C-214ENST00000399634 FTSJ3Q8IY81 847 aaKnown RBP17.35■□□□□ 0.37
CACNA1C-214ENST00000399634 KANK1Q14678 1352 aa17.35■□□□□ 0.37
CACNA1C-214ENST00000399634 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
CACNA1C-214ENST00000399634 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
CACNA1C-214ENST00000399634 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
CACNA1C-214ENST00000399634 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
CACNA1C-214ENST00000399634 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
CACNA1C-214ENST00000399634 PKD2Q13563 968 aa17.31■□□□□ 0.36
CACNA1C-214ENST00000399634 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
CACNA1C-214ENST00000399634 CARMIL2Q6F5E8 1435 aa17.3■□□□□ 0.36
CACNA1C-214ENST00000399634 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
CACNA1C-214ENST00000399634 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
CACNA1C-214ENST00000399634 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
CACNA1C-214ENST00000399634 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
CACNA1C-214ENST00000399634 RAB3GAP2Q9H2M9 1393 aa17.27■□□□□ 0.35
CACNA1C-214ENST00000399634 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.35
CACNA1C-214ENST00000399634 GOLGA6L22H0YM25 854 aa17.24■□□□□ 0.35
CACNA1C-214ENST00000399634 FOXD1Q16676 465 aa17.24■□□□□ 0.35
CACNA1C-214ENST00000399634 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
CACNA1C-214ENST00000399634 CASC1Q6TDU7 716 aa17.24■□□□□ 0.35
CACNA1C-214ENST00000399634 ANP32EQ9BTT0 268 aa17.24■□□□□ 0.35
CACNA1C-214ENST00000399634 RGS3P49796 1198 aa17.24■□□□□ 0.35
CACNA1C-214ENST00000399634 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
CACNA1C-214ENST00000399634 MS4A1P11836 297 aa17.23■□□□□ 0.35
CACNA1C-214ENST00000399634 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
CACNA1C-214ENST00000399634 CHMP4BQ9H444 224 aaKnown RBP17.22■□□□□ 0.35
CACNA1C-214ENST00000399634 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
CACNA1C-214ENST00000399634 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
CACNA1C-214ENST00000399634 SRPK2P78362 688 aaKnown RBP17.2■□□□□ 0.34
CACNA1C-214ENST00000399634 GGT6Q6P531 493 aa17.2■□□□□ 0.34
CACNA1C-214ENST00000399634 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
CACNA1C-214ENST00000399634 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
CACNA1C-214ENST00000399634 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
CACNA1C-214ENST00000399634 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
CACNA1C-214ENST00000399634 ANKRD30AQ9BXX3 1397 aa17.19■□□□□ 0.34
CACNA1C-214ENST00000399634 NUP155O75694 1391 aa17.19■□□□□ 0.34
CACNA1C-214ENST00000399634 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
CACNA1C-214ENST00000399634 MLECQ14165 292 aa17.18■□□□□ 0.34
CACNA1C-214ENST00000399634 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms