RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
CACNA1C-213ENST00000399629 RB1CC1Q8TDY2 1594 aa16.05■□□□□ 0.16
CACNA1C-213ENST00000399629 MLECQ14165 292 aa16.02■□□□□ 0.16
CACNA1C-213ENST00000399629 POGKQ9P215 609 aa16.02■□□□□ 0.15
CACNA1C-213ENST00000399629 HNRNPUQ00839 825 aaKnown RBP eCLIP16.01■□□□□ 0.15
CACNA1C-213ENST00000399629 RGL3Q3MIN7 710 aa16■□□□□ 0.15
CACNA1C-213ENST00000399629 CFAP53Q96M91 514 aa15.99■□□□□ 0.15
CACNA1C-213ENST00000399629 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
CACNA1C-213ENST00000399629 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-213ENST00000399629 HDGFP51858 240 aaKnown RBP15.96■□□□□ 0.14
CACNA1C-213ENST00000399629 DDX10Q13206 875 aaKnown RBP15.95■□□□□ 0.14
CACNA1C-213ENST00000399629 GOLGA2Q08379 1002 aa15.94■□□□□ 0.14
CACNA1C-213ENST00000399629 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
CACNA1C-213ENST00000399629 CFDP1Q9UEE9 299 aaPredicted RBP15.92■□□□□ 0.14
CACNA1C-213ENST00000399629 LAS1LQ9Y4W2 734 aaKnown RBP15.91■□□□□ 0.14
CACNA1C-213ENST00000399629 AEBP2Q6ZN18 517 aaPredicted RBP15.91■□□□□ 0.14
CACNA1C-213ENST00000399629 CDCA8Q53HL2 280 aa15.9■□□□□ 0.14
CACNA1C-213ENST00000399629 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
CACNA1C-213ENST00000399629 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-213ENST00000399629 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
CACNA1C-213ENST00000399629 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
CACNA1C-213ENST00000399629 CCDC9Q9Y3X0 531 aaKnown RBP15.86■□□□□ 0.13
CACNA1C-213ENST00000399629 EIF4G2P78344 907 aaKnown RBP eCLIP15.86■□□□□ 0.13
CACNA1C-213ENST00000399629 FKBP8Q14318 412 aa15.85■□□□□ 0.13
CACNA1C-213ENST00000399629 CASC1Q6TDU7 716 aa15.85■□□□□ 0.13
CACNA1C-213ENST00000399629 KANK1Q14678 1352 aa15.85■□□□□ 0.13
CACNA1C-213ENST00000399629 KNSTRNQ9Y448 316 aa15.85■□□□□ 0.13
CACNA1C-213ENST00000399629 TAOK2Q9UL54 1235 aa15.84■□□□□ 0.13
CACNA1C-213ENST00000399629 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
CACNA1C-213ENST00000399629 ZRSR1Q15695 479 aaKnown RBP15.83■□□□□ 0.12
CACNA1C-213ENST00000399629 NUDCQ9Y266 331 aa15.82■□□□□ 0.12
CACNA1C-213ENST00000399629 OS9Q13438 667 aaPredicted RBP15.82■□□□□ 0.12
CACNA1C-213ENST00000399629 TMX4Q9H1E5 349 aaPredicted RBP15.82■□□□□ 0.12
CACNA1C-213ENST00000399629 ACIN1Q9UKV3 1341 aaKnown RBP15.8■□□□□ 0.12
CACNA1C-213ENST00000399629 SOX12O15370 315 aa15.8■□□□□ 0.12
CACNA1C-213ENST00000399629 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
CACNA1C-213ENST00000399629 ZCCHC6Q5VYS8 1495 aaKnown RBP15.79■□□□□ 0.12
CACNA1C-213ENST00000399629 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
CACNA1C-213ENST00000399629 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
CACNA1C-213ENST00000399629 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
CACNA1C-213ENST00000399629 CLSTN1O94985 981 aa15.78■□□□□ 0.12
CACNA1C-213ENST00000399629 CSB-PGBD3P0DP91 1061 aa15.76■□□□□ 0.11
CACNA1C-213ENST00000399629 TNNT2P45379 298 aaPredicted RBP15.75■□□□□ 0.11
CACNA1C-213ENST00000399629 CLIP1P30622 1438 aa15.74■□□□□ 0.11
CACNA1C-213ENST00000399629 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
CACNA1C-213ENST00000399629 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
CACNA1C-213ENST00000399629 NEUROD2Q15784 382 aa15.74■□□□□ 0.11
CACNA1C-213ENST00000399629 CARD11Q9BXL7 1154 aa15.74■□□□□ 0.11
CACNA1C-213ENST00000399629 PNNQ9H307 717 aaKnown RBP15.74■□□□□ 0.11
CACNA1C-213ENST00000399629 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
CACNA1C-213ENST00000399629 U2SURPO15042 1029 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-213ENST00000399629 TPRNQ4KMQ1 711 aa15.72■□□□□ 0.11
CACNA1C-213ENST00000399629 SRPK2P78362 688 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-213ENST00000399629 NAP1L2Q9ULW6 460 aaPredicted RBP15.72■□□□□ 0.11
CACNA1C-213ENST00000399629 FGD1P98174 961 aa15.71■□□□□ 0.1
CACNA1C-213ENST00000399629 GGT6Q6P531 493 aa15.69■□□□□ 0.1
CACNA1C-213ENST00000399629 EIF5BO60841 1220 aaKnown RBP15.69■□□□□ 0.1
CACNA1C-213ENST00000399629 KIF27Q86VH2 1401 aa15.68■□□□□ 0.1
CACNA1C-213ENST00000399629 CCNB3Q8WWL7 1395 aa15.68■□□□□ 0.1
CACNA1C-213ENST00000399629 SAFB2Q14151 953 aaKnown RBP eCLIP15.67■□□□□ 0.1
CACNA1C-213ENST00000399629 BECN1Q14457 450 aa15.67■□□□□ 0.1
CACNA1C-213ENST00000399629 ZNF330Q9Y3S2 320 aaPredicted RBP15.67■□□□□ 0.1
CACNA1C-213ENST00000399629 KCNJ4P48050 445 aa15.66■□□□□ 0.1
CACNA1C-213ENST00000399629 G3V3G9 751 aa15.65■□□□□ 0.1
CACNA1C-213ENST00000399629 GOLGA6L22H0YM25 854 aa15.65■□□□□ 0.1
CACNA1C-213ENST00000399629 DCAF8Q5TAQ9 597 aa15.65■□□□□ 0.1
CACNA1C-213ENST00000399629 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
CACNA1C-213ENST00000399629 STK26Q9P289 416 aa15.65■□□□□ 0.1
CACNA1C-213ENST00000399629 CHMP4BQ9H444 224 aaKnown RBP15.62■□□□□ 0.09
CACNA1C-213ENST00000399629 GOLGA3Q08378 1498 aa15.62■□□□□ 0.09
CACNA1C-213ENST00000399629 NACADO15069 1562 aa15.62■□□□□ 0.09
CACNA1C-213ENST00000399629 EID1Q9Y6B2 187 aa15.6■□□□□ 0.09
CACNA1C-213ENST00000399629 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
CACNA1C-213ENST00000399629 CC2D1BQ5T0F9 858 aaKnown RBP15.6■□□□□ 0.09
CACNA1C-213ENST00000399629 MEX3CQ5U5Q3 659 aaKnown RBP15.6■□□□□ 0.09
CACNA1C-213ENST00000399629 HDGFL2Q7Z4V5 671 aaPredicted RBP15.59■□□□□ 0.09
CACNA1C-213ENST00000399629 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
CACNA1C-213ENST00000399629 FRAT1Q92837 279 aaPredicted RBP15.57■□□□□ 0.08
CACNA1C-213ENST00000399629 WRNQ14191 1432 aaPredicted RBP eCLIP15.57■□□□□ 0.08
CACNA1C-213ENST00000399629 TMF1P82094 1093 aa15.56■□□□□ 0.08
CACNA1C-213ENST00000399629 NBR1Q14596 966 aa15.56■□□□□ 0.08
CACNA1C-213ENST00000399629 CARMIL2Q6F5E8 1435 aa15.56■□□□□ 0.08
CACNA1C-213ENST00000399629 DDRGK1Q96HY6 314 aa15.56■□□□□ 0.08
CACNA1C-213ENST00000399629 PTMAP06454 111 aaKnown RBP15.54■□□□□ 0.08
CACNA1C-213ENST00000399629 MS4A1P11836 297 aa15.54■□□□□ 0.08
CACNA1C-213ENST00000399629 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
CACNA1C-213ENST00000399629 MORC1Q86VD1 984 aa15.53■□□□□ 0.08
CACNA1C-213ENST00000399629 DCAF11Q8TEB1 546 aa15.52■□□□□ 0.08
CACNA1C-213ENST00000399629 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
CACNA1C-213ENST00000399629 MSH5O43196 834 aa15.51■□□□□ 0.07
CACNA1C-213ENST00000399629 EEA1Q15075 1411 aa15.51■□□□□ 0.07
CACNA1C-213ENST00000399629 GOLGA6L6A8MZA4 724 aa15.51■□□□□ 0.07
CACNA1C-213ENST00000399629 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.5■□□□□ 0.07
CACNA1C-213ENST00000399629 TRIM44Q96DX7 344 aaPredicted RBP15.5■□□□□ 0.07
CACNA1C-213ENST00000399629 GNL2Q13823 731 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-213ENST00000399629 TAF7LQ5H9L4 462 aa15.48■□□□□ 0.07
CACNA1C-213ENST00000399629 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
CACNA1C-213ENST00000399629 ANP32EQ9BTT0 268 aa15.46■□□□□ 0.06
CACNA1C-213ENST00000399629 CHMP3Q9Y3E7 222 aa15.46■□□□□ 0.06
CACNA1C-213ENST00000399629 PRM3Q9NNZ6 103 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms