RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 CHGAP10645 457 aaKnown RBP11.07□□□□□ -0.64
SPTLC3-201ENST00000399002 KIF27Q86VH2 1401 aa11.06□□□□□ -0.64
SPTLC3-201ENST00000399002 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
SPTLC3-201ENST00000399002 WRNQ14191 1432 aaPredicted RBP eCLIP11.04□□□□□ -0.64
SPTLC3-201ENST00000399002 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
SPTLC3-201ENST00000399002 BCL11AQ9H165 835 aa11.02□□□□□ -0.65
SPTLC3-201ENST00000399002 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
SPTLC3-201ENST00000399002 GOLGA6L22H0YM25 854 aa11.01□□□□□ -0.65
SPTLC3-201ENST00000399002 CFAP53Q96M91 514 aa11.01□□□□□ -0.65
SPTLC3-201ENST00000399002 CASC1Q6TDU7 716 aa11□□□□□ -0.65
SPTLC3-201ENST00000399002 CHMP4BQ9H444 224 aaKnown RBP11□□□□□ -0.65
SPTLC3-201ENST00000399002 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
SPTLC3-201ENST00000399002 CHIC2Q9UKJ5 165 aa10.99□□□□□ -0.65
SPTLC3-201ENST00000399002 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
SPTLC3-201ENST00000399002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.657e-7■□□□□ 11.2
SPTLC3-201ENST00000399002 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
SPTLC3-201ENST00000399002 PPM1GO15355 546 aaPredicted RBP10.96□□□□□ -0.65
SPTLC3-201ENST00000399002 PLEKHD1A6NEE1 506 aa10.96□□□□□ -0.66
SPTLC3-201ENST00000399002 MS4A1P11836 297 aa10.95□□□□□ -0.66
SPTLC3-201ENST00000399002 MIER1Q8N108 512 aa10.94□□□□□ -0.66
SPTLC3-201ENST00000399002 CDK11BP21127 795 aaKnown RBP10.94□□□□□ -0.66
SPTLC3-201ENST00000399002 PNNQ9H307 717 aaKnown RBP10.94□□□□□ -0.66
SPTLC3-201ENST00000399002 TRIM44Q96DX7 344 aaPredicted RBP10.93□□□□□ -0.66
SPTLC3-201ENST00000399002 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
SPTLC3-201ENST00000399002 NBR1Q14596 966 aa10.91□□□□□ -0.66
SPTLC3-201ENST00000399002 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
SPTLC3-201ENST00000399002 KNSTRNQ9Y448 316 aa10.91□□□□□ -0.66
SPTLC3-201ENST00000399002 MYO15BQ96JP2 1530 aa10.9□□□□□ -0.66
SPTLC3-201ENST00000399002 PPP4R2Q9NY27 417 aa10.89□□□□□ -0.67
SPTLC3-201ENST00000399002 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
SPTLC3-201ENST00000399002 SALL2Q9Y467 1007 aaPredicted RBP10.88□□□□□ -0.67
SPTLC3-201ENST00000399002 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
SPTLC3-201ENST00000399002 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
SPTLC3-201ENST00000399002 NUDCQ9Y266 331 aa10.88□□□□□ -0.67
SPTLC3-201ENST00000399002 KANK1Q14678 1352 aa10.87□□□□□ -0.67
SPTLC3-201ENST00000399002 CFDP1Q9UEE9 299 aaPredicted RBP10.86□□□□□ -0.67
SPTLC3-201ENST00000399002 TNNT2P45379 298 aaPredicted RBP10.86□□□□□ -0.67
SPTLC3-201ENST00000399002 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
SPTLC3-201ENST00000399002 GOLGA6L6A8MZA4 724 aa10.85□□□□□ -0.67
SPTLC3-201ENST00000399002 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
SPTLC3-201ENST00000399002 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
SPTLC3-201ENST00000399002 MAPK8IP3Q9UPT6 1336 aa10.85□□□□□ -0.67
SPTLC3-201ENST00000399002 ZRSR1Q15695 479 aaKnown RBP10.85□□□□□ -0.67
SPTLC3-201ENST00000399002 CCNB3Q8WWL7 1395 aa10.85□□□□□ -0.67
SPTLC3-201ENST00000399002 ERICH6BQ5W0A0 696 aa10.84□□□□□ -0.67
SPTLC3-201ENST00000399002 ARHGAP35Q9NRY4 1499 aa10.84□□□□□ -0.67
SPTLC3-201ENST00000399002 PTMSP20962 102 aa10.84□□□□□ -0.67
SPTLC3-201ENST00000399002 SMARCA2P51531 1590 aa10.83□□□□□ -0.67
SPTLC3-201ENST00000399002 ARID4BQ4LE39 1312 aaPredicted RBP10.81□□□□□ -0.68
SPTLC3-201ENST00000399002 SETD5Q9C0A6 1442 aa10.8□□□□□ -0.68
SPTLC3-201ENST00000399002 TMF1P82094 1093 aa10.8□□□□□ -0.68
SPTLC3-201ENST00000399002 PTMAP06454 111 aaKnown RBP10.79□□□□□ -0.68
SPTLC3-201ENST00000399002 VPS8Q8N3P4 1428 aa10.79□□□□□ -0.68
SPTLC3-201ENST00000399002 HAP1P54257 671 aaPredicted RBP10.79□□□□□ -0.68
SPTLC3-201ENST00000399002 NOP58Q9Y2X3 529 aaKnown RBP10.79□□□□□ -0.68
SPTLC3-201ENST00000399002 ERCC6Q03468 1493 aa10.78□□□□□ -0.68
SPTLC3-201ENST00000399002 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
SPTLC3-201ENST00000399002 IRX6P78412 446 aaPredicted RBP10.77□□□□□ -0.68
SPTLC3-201ENST00000399002 L1TD1Q5T7N2 865 aaKnown RBP10.77□□□□□ -0.68
SPTLC3-201ENST00000399002 EIF4G1Q04637 1599 aaKnown RBP10.76□□□□□ -0.69
SPTLC3-201ENST00000399002 CARMIL1Q5VZK9 1371 aa10.76□□□□□ -0.69
SPTLC3-201ENST00000399002 NRDCO43847 1150 aa10.76□□□□□ -0.69
SPTLC3-201ENST00000399002 SUPT16HQ9Y5B9 1047 aaKnown RBP10.75□□□□□ -0.69
SPTLC3-201ENST00000399002 MCCP23508 829 aa10.75□□□□□ -0.69
SPTLC3-201ENST00000399002 FMN1Q68DA7 1419 aa10.74□□□□□ -0.69
SPTLC3-201ENST00000399002 TOP2AP11388 1531 aaKnown RBP10.74□□□□□ -0.69
SPTLC3-201ENST00000399002 CUX2O14529 1486 aa10.74□□□□□ -0.69
SPTLC3-201ENST00000399002 HSP90AB1P08238 724 aaKnown RBP10.74□□□□□ -0.69
SPTLC3-201ENST00000399002 EIF3AQ14152 1382 aaKnown RBP10.74□□□□□ -0.69
SPTLC3-201ENST00000399002 KCNH8Q96L42 1107 aa10.73□□□□□ -0.69
SPTLC3-201ENST00000399002 CARMIL2Q6F5E8 1435 aa10.73□□□□□ -0.69
SPTLC3-201ENST00000399002 HSCBQ8IWL3 235 aa10.73□□□□□ -0.69
SPTLC3-201ENST00000399002 ARXQ96QS3 562 aa10.73□□□□□ -0.69
SPTLC3-201ENST00000399002 KTN1Q86UP2 1357 aaKnown RBP10.73□□□□□ -0.69
SPTLC3-201ENST00000399002 C14orf37Q86TY3 774 aa10.72□□□□□ -0.69
SPTLC3-201ENST00000399002 POGKQ9P215 609 aa10.72□□□□□ -0.69
SPTLC3-201ENST00000399002 CALD1Q05682 793 aaKnown RBP10.72□□□□□ -0.69
SPTLC3-201ENST00000399002 RGL3Q3MIN7 710 aa10.71□□□□□ -0.69
SPTLC3-201ENST00000399002 RALBP1Q15311 655 aa10.71□□□□□ -0.7
SPTLC3-201ENST00000399002 HIRIP3Q9BW71 556 aaPredicted RBP10.71□□□□□ -0.7
SPTLC3-201ENST00000399002 DNTTIP2Q5QJE6 756 aaKnown RBP10.7□□□□□ -0.7
SPTLC3-201ENST00000399002 PLPPR3Q6T4P5 718 aa10.7□□□□□ -0.7
SPTLC3-201ENST00000399002 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
SPTLC3-201ENST00000399002 ZBTB7CA1YPR0 619 aa10.69□□□□□ -0.7
SPTLC3-201ENST00000399002 CHAF1AQ13111 956 aaPredicted RBP10.69□□□□□ -0.7
SPTLC3-201ENST00000399002 ROCK2O75116 1388 aaKnown RBP10.68□□□□□ -0.7
SPTLC3-201ENST00000399002 CCDC88BA6NC98 1476 aa10.67□□□□□ -0.7
SPTLC3-201ENST00000399002 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
SPTLC3-201ENST00000399002 PHLDB1Q86UU1 1377 aa10.67□□□□□ -0.7
SPTLC3-201ENST00000399002 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
SPTLC3-201ENST00000399002 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
SPTLC3-201ENST00000399002 ANKRD30AQ9BXX3 1397 aa10.66□□□□□ -0.7
SPTLC3-201ENST00000399002 NAP1L5Q96NT1 182 aaPredicted RBP10.65□□□□□ -0.7
SPTLC3-201ENST00000399002 LAS1LQ9Y4W2 734 aaKnown RBP10.65□□□□□ -0.71
SPTLC3-201ENST00000399002 CC2D1BQ5T0F9 858 aaKnown RBP10.64□□□□□ -0.71
SPTLC3-201ENST00000399002 MORC1Q86VD1 984 aa10.64□□□□□ -0.71
SPTLC3-201ENST00000399002 FRAT1Q92837 279 aaPredicted RBP10.64□□□□□ -0.71
SPTLC3-201ENST00000399002 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
SPTLC3-201ENST00000399002 SOGA1O94964 1423 aa10.63□□□□□ -0.71
SPTLC3-201ENST00000399002 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms