RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 EIF4G2P78344 907 aaKnown RBP eCLIP21.73■■□□□ 1.07
PCDHA12-201ENST00000398631 KIF27Q86VH2 1401 aa21.7■■□□□ 1.07
PCDHA12-201ENST00000398631 PPP1R15AO75807 674 aaPredicted RBP21.7■■□□□ 1.06
PCDHA12-201ENST00000398631 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
PCDHA12-201ENST00000398631 CFDP1Q9UEE9 299 aaPredicted RBP21.67■■□□□ 1.06
PCDHA12-201ENST00000398631 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
PCDHA12-201ENST00000398631 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
PCDHA12-201ENST00000398631 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
PCDHA12-201ENST00000398631 RGL3Q3MIN7 710 aa21.61■■□□□ 1.05
PCDHA12-201ENST00000398631 ANP32BQ92688 251 aaKnown RBP21.58■■□□□ 1.04
PCDHA12-201ENST00000398631 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
PCDHA12-201ENST00000398631 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
PCDHA12-201ENST00000398631 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
PCDHA12-201ENST00000398631 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
PCDHA12-201ENST00000398631 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
PCDHA12-201ENST00000398631 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
PCDHA12-201ENST00000398631 CDCA8Q53HL2 280 aa21.52■■□□□ 1.04
PCDHA12-201ENST00000398631 A0A0G2JS52 829 aa21.5■■□□□ 1.03
PCDHA12-201ENST00000398631 MYH16Q9H6N6 1097 aa21.5■■□□□ 1.03
PCDHA12-201ENST00000398631 MIER1Q8N108 512 aa21.5■■□□□ 1.03
PCDHA12-201ENST00000398631 ZBTB7CA1YPR0 619 aa21.49■■□□□ 1.03
PCDHA12-201ENST00000398631 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
PCDHA12-201ENST00000398631 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
PCDHA12-201ENST00000398631 CFAP53Q96M91 514 aa21.46■■□□□ 1.03
PCDHA12-201ENST00000398631 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
PCDHA12-201ENST00000398631 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
PCDHA12-201ENST00000398631 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
PCDHA12-201ENST00000398631 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
PCDHA12-201ENST00000398631 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
PCDHA12-201ENST00000398631 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
PCDHA12-201ENST00000398631 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
PCDHA12-201ENST00000398631 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
PCDHA12-201ENST00000398631 CECR2Q9BXF3 1484 aa21.33■■□□□ 1.01
PCDHA12-201ENST00000398631 PPM1GO15355 546 aaPredicted RBP21.33■■□□□ 1
PCDHA12-201ENST00000398631 POGKQ9P215 609 aa21.32■■□□□ 1
PCDHA12-201ENST00000398631 CUX2O14529 1486 aa21.31■■□□□ 1
PCDHA12-201ENST00000398631 SIN3AQ96ST3 1273 aa21.26■□□□□ 0.99
PCDHA12-201ENST00000398631 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
PCDHA12-201ENST00000398631 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
PCDHA12-201ENST00000398631 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
PCDHA12-201ENST00000398631 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
PCDHA12-201ENST00000398631 KANK1Q14678 1352 aa21.2■□□□□ 0.98
PCDHA12-201ENST00000398631 EIF5BO60841 1220 aaKnown RBP21.2■□□□□ 0.98
PCDHA12-201ENST00000398631 NEUROD2Q15784 382 aa21.2■□□□□ 0.98
PCDHA12-201ENST00000398631 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
PCDHA12-201ENST00000398631 NBR1Q14596 966 aa21.18■□□□□ 0.98
PCDHA12-201ENST00000398631 FTSJ3Q8IY81 847 aaKnown RBP21.17■□□□□ 0.98
PCDHA12-201ENST00000398631 ARXQ96QS3 562 aa21.17■□□□□ 0.98
PCDHA12-201ENST00000398631 SOGA1O94964 1423 aa21.17■□□□□ 0.98
PCDHA12-201ENST00000398631 BECN1Q14457 450 aa21.16■□□□□ 0.98
PCDHA12-201ENST00000398631 DCAF11Q8TEB1 546 aa21.15■□□□□ 0.98
PCDHA12-201ENST00000398631 HDGFP51858 240 aaKnown RBP21.15■□□□□ 0.98
PCDHA12-201ENST00000398631 GLIPR1L2Q4G1C9 344 aa21.14■□□□□ 0.98
PCDHA12-201ENST00000398631 TMF1P82094 1093 aa21.13■□□□□ 0.97
PCDHA12-201ENST00000398631 LAS1LQ9Y4W2 734 aaKnown RBP21.13■□□□□ 0.97
PCDHA12-201ENST00000398631 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
PCDHA12-201ENST00000398631 TIMELESSQ9UNS1 1208 aa21.12■□□□□ 0.97
PCDHA12-201ENST00000398631 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
PCDHA12-201ENST00000398631 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
PCDHA12-201ENST00000398631 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
PCDHA12-201ENST00000398631 MLECQ14165 292 aa21.11■□□□□ 0.97
PCDHA12-201ENST00000398631 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
PCDHA12-201ENST00000398631 SUPT16HQ9Y5B9 1047 aaKnown RBP21.09■□□□□ 0.97
PCDHA12-201ENST00000398631 CC2D1BQ5T0F9 858 aaKnown RBP21.08■□□□□ 0.97
PCDHA12-201ENST00000398631 U2SURPO15042 1029 aaKnown RBP21.08■□□□□ 0.97
PCDHA12-201ENST00000398631 NCLP19338 710 aaKnown RBP21.07■□□□□ 0.96
PCDHA12-201ENST00000398631 PNNQ9H307 717 aaKnown RBP21.06■□□□□ 0.96
PCDHA12-201ENST00000398631 GGT6Q6P531 493 aa21.05■□□□□ 0.96
PCDHA12-201ENST00000398631 CASC1Q6TDU7 716 aa21.05■□□□□ 0.96
PCDHA12-201ENST00000398631 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
PCDHA12-201ENST00000398631 CHMP4BQ9H444 224 aaKnown RBP21.04■□□□□ 0.96
PCDHA12-201ENST00000398631 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
PCDHA12-201ENST00000398631 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
PCDHA12-201ENST00000398631 GOLGA6L22H0YM25 854 aa21.03■□□□□ 0.96
PCDHA12-201ENST00000398631 SRPK2P78362 688 aaKnown RBP21.03■□□□□ 0.96
PCDHA12-201ENST00000398631 FRAT1Q92837 279 aaPredicted RBP21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 ARHGAP35Q9NRY4 1499 aa21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 MS4A1P11836 297 aa21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 PKD2Q13563 968 aa21■□□□□ 0.95
PCDHA12-201ENST00000398631 SETD5Q9C0A6 1442 aa21■□□□□ 0.95
PCDHA12-201ENST00000398631 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
PCDHA12-201ENST00000398631 CDK11BP21127 795 aaKnown RBP21■□□□□ 0.95
PCDHA12-201ENST00000398631 ANP32EQ9BTT0 268 aa21■□□□□ 0.95
PCDHA12-201ENST00000398631 FMN1Q68DA7 1419 aa20.96■□□□□ 0.95
PCDHA12-201ENST00000398631 SAFB2Q14151 953 aaKnown RBP eCLIP20.95■□□□□ 0.94
PCDHA12-201ENST00000398631 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
PCDHA12-201ENST00000398631 PPP4R2Q9NY27 417 aa20.94■□□□□ 0.94
PCDHA12-201ENST00000398631 KANK4Q5T7N3 995 aaPredicted RBP20.93■□□□□ 0.94
PCDHA12-201ENST00000398631 NPHP1O15259 732 aa20.92■□□□□ 0.94
PCDHA12-201ENST00000398631 SOX12O15370 315 aa20.92■□□□□ 0.94
PCDHA12-201ENST00000398631 RGS3P49796 1198 aa20.92■□□□□ 0.94
PCDHA12-201ENST00000398631 OS9Q13438 667 aaPredicted RBP20.9■□□□□ 0.94
PCDHA12-201ENST00000398631 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
PCDHA12-201ENST00000398631 STK26Q9P289 416 aa20.89■□□□□ 0.94
PCDHA12-201ENST00000398631 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
PCDHA12-201ENST00000398631 HSPA5P11021 654 aaKnown RBP20.89■□□□□ 0.93
PCDHA12-201ENST00000398631 NUP155O75694 1391 aa20.88■□□□□ 0.93
PCDHA12-201ENST00000398631 ANKRD30AQ9BXX3 1397 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms