RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
CD47-203ENST00000398258 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
CD47-203ENST00000398258 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
CD47-203ENST00000398258 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
CD47-203ENST00000398258 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
CD47-203ENST00000398258 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
CD47-203ENST00000398258 ST18O60284 1047 aa10.88□□□□□ -0.67
CD47-203ENST00000398258 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
CD47-203ENST00000398258 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
CD47-203ENST00000398258 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
CD47-203ENST00000398258 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
CD47-203ENST00000398258 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
CD47-203ENST00000398258 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
CD47-203ENST00000398258 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
CD47-203ENST00000398258 COLQQ9Y215 455 aaPredicted RBP10.63□□□□□ -0.71
CD47-203ENST00000398258 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
CD47-203ENST00000398258 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
CD47-203ENST00000398258 TMEM121BQ9BXQ6 578 aaPredicted RBP10.57□□□□□ -0.72
CD47-203ENST00000398258 BMP2KQ9NSY1 1161 aaPredicted RBP10.56□□□□□ -0.72
CD47-203ENST00000398258 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
CD47-203ENST00000398258 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
CD47-203ENST00000398258 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
CD47-203ENST00000398258 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
CD47-203ENST00000398258 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.73
CD47-203ENST00000398258 CCDC61Q9Y6R9 512 aa10.52□□□□□ -0.73
CD47-203ENST00000398258 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
CD47-203ENST00000398258 PROM2Q8N271 834 aa10.47□□□□□ -0.73
CD47-203ENST00000398258 SEC24BO95487 1268 aa10.46□□□□□ -0.73
CD47-203ENST00000398258 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
CD47-203ENST00000398258 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
CD47-203ENST00000398258 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
CD47-203ENST00000398258 MAP3K13O43283 966 aa10.4□□□□□ -0.74
CD47-203ENST00000398258 TIE1P35590 1138 aa10.39□□□□□ -0.75
CD47-203ENST00000398258 RASEFQ8IZ41 740 aa10.38□□□□□ -0.75
CD47-203ENST00000398258 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
CD47-203ENST00000398258 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
CD47-203ENST00000398258 IER5LQ5T953 404 aa10.31□□□□□ -0.76
CD47-203ENST00000398258 SNPHO15079 494 aa10.3□□□□□ -0.76
CD47-203ENST00000398258 EMP3P54852 163 aa10.29□□□□□ -0.76
CD47-203ENST00000398258 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
CD47-203ENST00000398258 TRIM35Q9UPQ4 493 aa10.25□□□□□ -0.77
CD47-203ENST00000398258 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
CD47-203ENST00000398258 MIER1Q8N108 512 aa10.22□□□□□ -0.77
CD47-203ENST00000398258 NUBP1P53384 320 aa10.18□□□□□ -0.78
CD47-203ENST00000398258 IFNL1Q8IU54 200 aa10.18□□□□□ -0.78
CD47-203ENST00000398258 PCDHB13Q9Y5F0 798 aa10.17□□□□□ -0.78
CD47-203ENST00000398258 SGIP1Q9BQI5 828 aa10.13□□□□□ -0.79
CD47-203ENST00000398258 IRX5P78411 483 aaPredicted RBP10.11□□□□□ -0.79
CD47-203ENST00000398258 PLCG2P16885 1265 aa10.1□□□□□ -0.79
CD47-203ENST00000398258 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
CD47-203ENST00000398258 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.09□□□□□ -0.79
CD47-203ENST00000398258 MYT1LQ9UL68 1186 aa10.08□□□□□ -0.8
CD47-203ENST00000398258 PLEKHG5O94827 1062 aa10.07□□□□□ -0.8
CD47-203ENST00000398258 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
CD47-203ENST00000398258 FAM212AQ96EL1 285 aa9.97□□□□□ -0.81
CD47-203ENST00000398258 PYGBP11216 843 aa9.96□□□□□ -0.82
CD47-203ENST00000398258 OCEL1Q9H607 264 aa9.96□□□□□ -0.82
CD47-203ENST00000398258 PCDHB8Q9UN66 801 aa9.96□□□□□ -0.82
CD47-203ENST00000398258 PDCD7Q8N8D1 485 aaKnown RBP9.92□□□□□ -0.82
CD47-203ENST00000398258 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
CD47-203ENST00000398258 DCAF8Q5TAQ9 597 aa9.86□□□□□ -0.83
CD47-203ENST00000398258 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
CD47-203ENST00000398258 ERBB3P21860 1342 aa9.81□□□□□ -0.84
CD47-203ENST00000398258 HOXB3P14651 431 aaPredicted RBP9.8□□□□□ -0.84
CD47-203ENST00000398258 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
CD47-203ENST00000398258 FKBP8Q14318 412 aa9.8□□□□□ -0.84
CD47-203ENST00000398258 PTGER2P43116 358 aa9.79□□□□□ -0.84
CD47-203ENST00000398258 C3orf67Q6ZVT6 689 aa9.79□□□□□ -0.84
CD47-203ENST00000398258 DPY19L2Q6NUT2 758 aa9.76□□□□□ -0.85
CD47-203ENST00000398258 ILDR1Q86SU0 546 aaPredicted RBP9.75□□□□□ -0.85
CD47-203ENST00000398258 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
CD47-203ENST00000398258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.85
CD47-203ENST00000398258 MKRN3Q13064 507 aaKnown RBP9.7□□□□□ -0.86
CD47-203ENST00000398258 L3MBTL3Q96JM7 780 aaPredicted RBP9.7□□□□□ -0.86
CD47-203ENST00000398258 PSEN1P49768 467 aa9.69□□□□□ -0.86
CD47-203ENST00000398258 ZNF467Q7Z7K2 595 aaPredicted RBP9.69□□□□□ -0.86
CD47-203ENST00000398258 ZNF687Q8N1G0 1237 aa9.69□□□□□ -0.86
CD47-203ENST00000398258 CHRM1P11229 460 aaPredicted RBP9.65□□□□□ -0.86
CD47-203ENST00000398258 GOLGA2Q08379 1002 aa9.65□□□□□ -0.86
CD47-203ENST00000398258 GSE1Q14687 1217 aa9.62□□□□□ -0.87
CD47-203ENST00000398258 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
CD47-203ENST00000398258 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
CD47-203ENST00000398258 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
CD47-203ENST00000398258 VASPP50552 380 aaPredicted RBP9.6□□□□□ -0.87
CD47-203ENST00000398258 CABP2Q9NPB3 220 aa9.59□□□□□ -0.87
CD47-203ENST00000398258 BOLA1Q9Y3E2 137 aa9.59□□□□□ -0.87
CD47-203ENST00000398258 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
CD47-203ENST00000398258 PDAP1Q13442 181 aaKnown RBP9.57□□□□□ -0.88
CD47-203ENST00000398258 HCSTQ9UBK5 93 aa9.56□□□□□ -0.88
CD47-203ENST00000398258 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
CD47-203ENST00000398258 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
CD47-203ENST00000398258 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
CD47-203ENST00000398258 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
CD47-203ENST00000398258 RGS20O76081 388 aa9.47□□□□□ -0.89
CD47-203ENST00000398258 IFNLR1Q8IU57 520 aaPredicted RBP9.47□□□□□ -0.89
CD47-203ENST00000398258 EFCAB3Q8N7B9 438 aa9.47□□□□□ -0.89
CD47-203ENST00000398258 GPR153Q6NV75 609 aa9.44□□□□□ -0.9
CD47-203ENST00000398258 G3V3G9 751 aa9.43□□□□□ -0.9
CD47-203ENST00000398258 CIZ1Q9ULV3 898 aaPredicted RBP9.43□□□□□ -0.9
CD47-203ENST00000398258 MICALL2Q8IY33 904 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms