RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ 0
RGPD2-201ENST00000398146 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
RGPD2-201ENST00000398146 CCDC9Q9Y3X0 531 aaKnown RBP15.03■□□□□ -0
RGPD2-201ENST00000398146 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02■□□□□ -0
RGPD2-201ENST00000398146 KRI1Q8N9T8 703 aaKnown RBP15.01□□□□□ -0.01
RGPD2-201ENST00000398146 MLECQ14165 292 aa15□□□□□ -0.01
RGPD2-201ENST00000398146 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
RGPD2-201ENST00000398146 ZRSR1Q15695 479 aaKnown RBP14.99□□□□□ -0.01
RGPD2-201ENST00000398146 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
RGPD2-201ENST00000398146 NAP1L2Q9ULW6 460 aaPredicted RBP14.98□□□□□ -0.01
RGPD2-201ENST00000398146 SOX12O15370 315 aa14.96□□□□□ -0.01
RGPD2-201ENST00000398146 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
RGPD2-201ENST00000398146 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
RGPD2-201ENST00000398146 NCLP19338 710 aaKnown RBP14.93□□□□□ -0.02
RGPD2-201ENST00000398146 TONSLQ96HA7 1378 aa14.92□□□□□ -0.02
RGPD2-201ENST00000398146 OS9Q13438 667 aaPredicted RBP14.9□□□□□ -0.02
RGPD2-201ENST00000398146 ZNF330Q9Y3S2 320 aaPredicted RBP14.9□□□□□ -0.02
RGPD2-201ENST00000398146 HNRNPUQ00839 825 aaKnown RBP eCLIP14.9□□□□□ -0.02
RGPD2-201ENST00000398146 TMX4Q9H1E5 349 aaPredicted RBP14.89□□□□□ -0.03
RGPD2-201ENST00000398146 SENP3-EIF4A1A0A087X0R7 540 aa14.89□□□□□ -0.03
RGPD2-201ENST00000398146 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
RGPD2-201ENST00000398146 RGL3Q3MIN7 710 aa14.88□□□□□ -0.03
RGPD2-201ENST00000398146 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
RGPD2-201ENST00000398146 FGD1P98174 961 aa14.85□□□□□ -0.03
RGPD2-201ENST00000398146 POGKQ9P215 609 aa14.85□□□□□ -0.03
RGPD2-201ENST00000398146 NBR1Q14596 966 aa14.83□□□□□ -0.04
RGPD2-201ENST00000398146 G3V3G9 751 aa14.83□□□□□ -0.04
RGPD2-201ENST00000398146 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
RGPD2-201ENST00000398146 ANO8Q9HCE9 1232 aaPredicted RBP14.83□□□□□ -0.04
RGPD2-201ENST00000398146 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
RGPD2-201ENST00000398146 PDE4CQ08493 712 aa14.81□□□□□ -0.04
RGPD2-201ENST00000398146 FKBP8Q14318 412 aa14.81□□□□□ -0.04
RGPD2-201ENST00000398146 NEUROD2Q15784 382 aa14.81□□□□□ -0.04
RGPD2-201ENST00000398146 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
RGPD2-201ENST00000398146 CCDC136Q96JN2 1154 aa14.8□□□□□ -0.04
RGPD2-201ENST00000398146 CASC1Q6TDU7 716 aa14.78□□□□□ -0.04
RGPD2-201ENST00000398146 CSB-PGBD3P0DP91 1061 aa14.78□□□□□ -0.04
RGPD2-201ENST00000398146 DDX10Q13206 875 aaKnown RBP14.78□□□□□ -0.04
RGPD2-201ENST00000398146 PLCB2Q00722 1185 aa14.77□□□□□ -0.04
RGPD2-201ENST00000398146 KCNJ4P48050 445 aa14.77□□□□□ -0.05
RGPD2-201ENST00000398146 MSH5O43196 834 aa14.77□□□□□ -0.05
RGPD2-201ENST00000398146 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
RGPD2-201ENST00000398146 PTMAP06454 111 aaKnown RBP14.75□□□□□ -0.05
RGPD2-201ENST00000398146 CFAP53Q96M91 514 aa14.75□□□□□ -0.05
RGPD2-201ENST00000398146 EIF4G2P78344 907 aaKnown RBP eCLIP14.74□□□□□ -0.05
RGPD2-201ENST00000398146 TRIM44Q96DX7 344 aaPredicted RBP14.74□□□□□ -0.05
RGPD2-201ENST00000398146 IRX6P78412 446 aaPredicted RBP14.73□□□□□ -0.05
RGPD2-201ENST00000398146 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
RGPD2-201ENST00000398146 HIRIP3Q9BW71 556 aaPredicted RBP14.72□□□□□ -0.05
RGPD2-201ENST00000398146 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
RGPD2-201ENST00000398146 MAPK8IP3Q9UPT6 1336 aa14.72□□□□□ -0.05
RGPD2-201ENST00000398146 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.06
RGPD2-201ENST00000398146 FBXO3Q9UK99 471 aa14.71□□□□□ -0.06
RGPD2-201ENST00000398146 MRS2Q9HD23 443 aa14.7□□□□□ -0.06
RGPD2-201ENST00000398146 DNTTIP2Q5QJE6 756 aaKnown RBP14.7□□□□□ -0.06
RGPD2-201ENST00000398146 MEX3CQ5U5Q3 659 aaKnown RBP14.69□□□□□ -0.06
RGPD2-201ENST00000398146 SAFB2Q14151 953 aaKnown RBP eCLIP14.69□□□□□ -0.06
RGPD2-201ENST00000398146 U2SURPO15042 1029 aaKnown RBP14.68□□□□□ -0.06
RGPD2-201ENST00000398146 PLEKHD1A6NEE1 506 aa14.67□□□□□ -0.06
RGPD2-201ENST00000398146 GOLGA6L22H0YM25 854 aa14.65□□□□□ -0.06
RGPD2-201ENST00000398146 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
RGPD2-201ENST00000398146 CNKSR2Q8WXI2 1034 aa14.64□□□□□ -0.07
RGPD2-201ENST00000398146 GNL2Q13823 731 aaKnown RBP14.64□□□□□ -0.07
RGPD2-201ENST00000398146 MTUS2Q5JR59 1369 aa14.63□□□□□ -0.07
RGPD2-201ENST00000398146 VPS53Q5VIR6 699 aa14.63□□□□□ -0.07
RGPD2-201ENST00000398146 WWC1Q8IX03 1113 aa14.63□□□□□ -0.07
RGPD2-201ENST00000398146 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
RGPD2-201ENST00000398146 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
RGPD2-201ENST00000398146 GLIPR1L2Q4G1C9 344 aa14.61□□□□□ -0.07
RGPD2-201ENST00000398146 ERICH6BQ5W0A0 696 aa14.6□□□□□ -0.07
RGPD2-201ENST00000398146 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
RGPD2-201ENST00000398146 CHMP3Q9Y3E7 222 aa14.59□□□□□ -0.07
RGPD2-201ENST00000398146 BECN1Q14457 450 aa14.59□□□□□ -0.07
RGPD2-201ENST00000398146 NUDCQ9Y266 331 aa14.59□□□□□ -0.07
RGPD2-201ENST00000398146 GOLGA6L6A8MZA4 724 aa14.58□□□□□ -0.08
RGPD2-201ENST00000398146 STK26Q9P289 416 aa14.58□□□□□ -0.08
RGPD2-201ENST00000398146 SRPK2P78362 688 aaKnown RBP14.57□□□□□ -0.08
RGPD2-201ENST00000398146 CWC22Q9HCG8 908 aaKnown RBP14.56□□□□□ -0.08
RGPD2-201ENST00000398146 HDGFP51858 240 aaKnown RBP14.56□□□□□ -0.08
RGPD2-201ENST00000398146 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
RGPD2-201ENST00000398146 NOC3LQ8WTT2 800 aaKnown RBP14.55□□□□□ -0.08
RGPD2-201ENST00000398146 PNNQ9H307 717 aaKnown RBP14.55□□□□□ -0.08
RGPD2-201ENST00000398146 RTF1Q92541 710 aaKnown RBP14.54□□□□□ -0.08
RGPD2-201ENST00000398146 APBB1O00213 710 aa14.54□□□□□ -0.08
RGPD2-201ENST00000398146 GOLGA6L4A6NEF3 574 aa14.54□□□□□ -0.08
RGPD2-201ENST00000398146 TAF7LQ5H9L4 462 aa14.54□□□□□ -0.08
RGPD2-201ENST00000398146 FRAT2O75474 233 aaPredicted RBP14.53□□□□□ -0.08
RGPD2-201ENST00000398146 KIAA2012Q0VF49 1180 aa14.53□□□□□ -0.08
RGPD2-201ENST00000398146 RAD21O60216 631 aa14.52□□□□□ -0.09
RGPD2-201ENST00000398146 GORABQ5T7V8 394 aa14.51□□□□□ -0.09
RGPD2-201ENST00000398146 CC2D1BQ5T0F9 858 aaKnown RBP14.5□□□□□ -0.09
RGPD2-201ENST00000398146 GGT6Q6P531 493 aa14.49□□□□□ -0.09
RGPD2-201ENST00000398146 FBXW7Q969H0 707 aa14.49□□□□□ -0.09
RGPD2-201ENST00000398146 CDCA8Q53HL2 280 aa14.48□□□□□ -0.09
RGPD2-201ENST00000398146 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
RGPD2-201ENST00000398146 HSP90AB1P08238 724 aaKnown RBP14.47□□□□□ -0.09
RGPD2-201ENST00000398146 ANP32EQ9BTT0 268 aa14.47□□□□□ -0.09
RGPD2-201ENST00000398146 CREBRFQ8IUR6 639 aa14.47□□□□□ -0.09
RGPD2-201ENST00000398146 DRC7Q8IY82 874 aa14.46□□□□□ -0.09
RGPD2-201ENST00000398146 CTDP1Q9Y5B0 961 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms