RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
TRPM1-202ENST00000397795 CHAF1AQ13111 956 aaPredicted RBP12.04□□□□□ -0.48
TRPM1-202ENST00000397795 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
TRPM1-202ENST00000397795 IRX6P78412 446 aaPredicted RBP12.02□□□□□ -0.48
TRPM1-202ENST00000397795 PODXL2Q9NZ53 605 aa12□□□□□ -0.49
TRPM1-202ENST00000397795 GOLGA6L6A8MZA4 724 aa11.98□□□□□ -0.49
TRPM1-202ENST00000397795 L1TD1Q5T7N2 865 aaKnown RBP11.97□□□□□ -0.49
TRPM1-202ENST00000397795 VSIG10Q8N0Z9 540 aa11.97□□□□□ -0.49
TRPM1-202ENST00000397795 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
TRPM1-202ENST00000397795 MSNP26038 577 aaKnown RBP11.96□□□□□ -0.5
TRPM1-202ENST00000397795 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
TRPM1-202ENST00000397795 NRDCO43847 1150 aa11.94□□□□□ -0.5
TRPM1-202ENST00000397795 ZRSR1Q15695 479 aaKnown RBP11.94□□□□□ -0.5
TRPM1-202ENST00000397795 APPP05067 770 aa11.93□□□□□ -0.5
TRPM1-202ENST00000397795 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
TRPM1-202ENST00000397795 IPO9Q96P70 1041 aaKnown RBP11.92□□□□□ -0.5
TRPM1-202ENST00000397795 SETQ01105 290 aaPredicted RBP11.91□□□□□ -0.5
TRPM1-202ENST00000397795 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
TRPM1-202ENST00000397795 HSP90AA2PQ14568 343 aaPredicted RBP11.88□□□□□ -0.51
TRPM1-202ENST00000397795 IL27Q8NEV9 243 aa11.88□□□□□ -0.51
TRPM1-202ENST00000397795 MSH5O43196 834 aa11.88□□□□□ -0.51
TRPM1-202ENST00000397795 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
TRPM1-202ENST00000397795 B4GALNT3Q6L9W6 998 aa11.85□□□□□ -0.51
TRPM1-202ENST00000397795 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
TRPM1-202ENST00000397795 GOLGA6L1Q8N7Z2 621 aa11.82□□□□□ -0.52
TRPM1-202ENST00000397795 ARID4BQ4LE39 1312 aaPredicted RBP11.81□□□□□ -0.52
TRPM1-202ENST00000397795 A0A0U1RQG5 324 aaPredicted RBP11.81□□□□□ -0.52
TRPM1-202ENST00000397795 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
TRPM1-202ENST00000397795 GSE1Q14687 1217 aa11.79□□□□□ -0.52
TRPM1-202ENST00000397795 ZCCHC6Q5VYS8 1495 aaKnown RBP11.77□□□□□ -0.53
TRPM1-202ENST00000397795 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
TRPM1-202ENST00000397795 MYH16Q9H6N6 1097 aa11.75□□□□□ -0.53
TRPM1-202ENST00000397795 CEP162Q5TB80 1403 aa11.74□□□□□ -0.53
TRPM1-202ENST00000397795 KIAA2012Q0VF49 1180 aa11.74□□□□□ -0.53
TRPM1-202ENST00000397795 GOLGA6L3A6NEY3 463 aa11.73□□□□□ -0.53
TRPM1-202ENST00000397795 MRS2Q9HD23 443 aa11.73□□□□□ -0.53
TRPM1-202ENST00000397795 NOC3LQ8WTT2 800 aaKnown RBP11.72□□□□□ -0.53
TRPM1-202ENST00000397795 ARID3AQ99856 593 aa11.72□□□□□ -0.53
TRPM1-202ENST00000397795 FAM50AQ14320 339 aaKnown RBP11.72□□□□□ -0.53
TRPM1-202ENST00000397795 KCNH8Q96L42 1107 aa11.71□□□□□ -0.53
TRPM1-202ENST00000397795 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
TRPM1-202ENST00000397795 TONSLQ96HA7 1378 aa11.69□□□□□ -0.54
TRPM1-202ENST00000397795 CASC1Q6TDU7 716 aa11.68□□□□□ -0.54
TRPM1-202ENST00000397795 TCERG1O14776 1098 aaKnown RBP11.68□□□□□ -0.54
TRPM1-202ENST00000397795 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
TRPM1-202ENST00000397795 BRPF3Q9ULD4 1205 aa11.67□□□□□ -0.54
TRPM1-202ENST00000397795 ZMYND15Q9H091 742 aa11.67□□□□□ -0.54
TRPM1-202ENST00000397795 STK11IPQ8N1F8 1099 aa11.67□□□□□ -0.54
TRPM1-202ENST00000397795 DRC7Q8IY82 874 aa11.66□□□□□ -0.54
TRPM1-202ENST00000397795 TNIKQ9UKE5 1360 aa11.66□□□□□ -0.54
TRPM1-202ENST00000397795 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-202ENST00000397795 HIRIP3Q9BW71 556 aaPredicted RBP11.65□□□□□ -0.54
TRPM1-202ENST00000397795 EEA1Q15075 1411 aa11.65□□□□□ -0.54
TRPM1-202ENST00000397795 RRP9O43818 475 aaKnown RBP11.65□□□□□ -0.54
TRPM1-202ENST00000397795 NOM1Q5C9Z4 860 aaKnown RBP11.63□□□□□ -0.55
TRPM1-202ENST00000397795 WRNQ14191 1432 aaPredicted RBP eCLIP11.63□□□□□ -0.55
TRPM1-202ENST00000397795 GOLGA6L4A6NEF3 574 aa11.62□□□□□ -0.55
TRPM1-202ENST00000397795 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
TRPM1-202ENST00000397795 TMC1Q8TDI8 760 aa11.59□□□□□ -0.55
TRPM1-202ENST00000397795 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
TRPM1-202ENST00000397795 GPS2Q13227 327 aa11.57□□□□□ -0.56
TRPM1-202ENST00000397795 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
TRPM1-202ENST00000397795 HSCBQ8IWL3 235 aa11.57□□□□□ -0.56
TRPM1-202ENST00000397795 NEFHP12036 1026 aa11.56□□□□□ -0.56
TRPM1-202ENST00000397795 WDR43Q15061 677 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRPM1-202ENST00000397795 TEX35Q5T0J7 233 aa11.56□□□□□ -0.56
TRPM1-202ENST00000397795 CLIP1P30622 1438 aa11.55□□□□□ -0.56
TRPM1-202ENST00000397795 FRAT1Q92837 279 aaPredicted RBP11.55□□□□□ -0.56
TRPM1-202ENST00000397795 HTATSF1O43719 755 aaKnown RBP11.55□□□□□ -0.56
TRPM1-202ENST00000397795 GBP4Q96PP9 640 aa11.54□□□□□ -0.56
TRPM1-202ENST00000397795 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
TRPM1-202ENST00000397795 PDE4CQ08493 712 aa11.54□□□□□ -0.56
TRPM1-202ENST00000397795 NFKBIBQ15653 356 aa11.53□□□□□ -0.56
TRPM1-202ENST00000397795 PDE4AP27815 886 aa11.53□□□□□ -0.56
TRPM1-202ENST00000397795 RRP12Q5JTH9 1297 aaKnown RBP11.53□□□□□ -0.56
TRPM1-202ENST00000397795 SYAP1Q96A49 352 aaPredicted RBP11.52□□□□□ -0.57
TRPM1-202ENST00000397795 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRPM1-202ENST00000397795 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
TRPM1-202ENST00000397795 DHX57Q6P158 1386 aaKnown RBP11.51□□□□□ -0.57
TRPM1-202ENST00000397795 CCDC66A2RUB6 948 aa11.51□□□□□ -0.57
TRPM1-202ENST00000397795 MS4A1P11836 297 aa11.51□□□□□ -0.57
TRPM1-202ENST00000397795 MTERF4Q7Z6M4 381 aaKnown RBP11.5□□□□□ -0.57
TRPM1-202ENST00000397795 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
TRPM1-202ENST00000397795 ZBTB7CA1YPR0 619 aa11.49□□□□□ -0.57
TRPM1-202ENST00000397795 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
TRPM1-202ENST00000397795 TPM2P07951 284 aa11.48□□□□□ -0.57
TRPM1-202ENST00000397795 TPM4P67936 248 aa11.48□□□□□ -0.57
TRPM1-202ENST00000397795 CWC15Q9P013 229 aaKnown RBP11.47□□□□□ -0.57
TRPM1-202ENST00000397795 TAF7LQ5H9L4 462 aa11.47□□□□□ -0.57
TRPM1-202ENST00000397795 RDXP35241 583 aaKnown RBP11.47□□□□□ -0.57
TRPM1-202ENST00000397795 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
TRPM1-202ENST00000397795 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
TRPM1-202ENST00000397795 NUDCQ9Y266 331 aa11.46□□□□□ -0.57
TRPM1-202ENST00000397795 SIN3AQ96ST3 1273 aa11.46□□□□□ -0.57
TRPM1-202ENST00000397795 WASHC2AQ641Q2 1341 aa11.46□□□□□ -0.58
TRPM1-202ENST00000397795 RSF1Q96T23 1441 aaPredicted RBP11.46□□□□□ -0.58
TRPM1-202ENST00000397795 HMMRO75330 724 aa11.45□□□□□ -0.58
TRPM1-202ENST00000397795 ZBED9Q6R2W3 1325 aa11.44□□□□□ -0.58
TRPM1-202ENST00000397795 CCDC191Q8NCU4 936 aa11.44□□□□□ -0.58
TRPM1-202ENST00000397795 WASHC2CQ9Y4E1 1318 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms