RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.09
PGBD4-201ENST00000397766 ANP32EQ9BTT0 268 aa8.26□□□□□ -1.09
PGBD4-201ENST00000397766 CHIC2Q9UKJ5 165 aa8.26□□□□□ -1.09
PGBD4-201ENST00000397766 GOLGA3Q08378 1498 aa8.26□□□□□ -1.09
PGBD4-201ENST00000397766 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
PGBD4-201ENST00000397766 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
PGBD4-201ENST00000397766 BECN1Q14457 450 aa8.24□□□□□ -1.09
PGBD4-201ENST00000397766 SCAF1Q9H7N4 1312 aaKnown RBP8.24□□□□□ -1.09
PGBD4-201ENST00000397766 CDK11BP21127 795 aaKnown RBP8.23□□□□□ -1.09
PGBD4-201ENST00000397766 CFAP53Q96M91 514 aa8.23□□□□□ -1.09
PGBD4-201ENST00000397766 NACADO15069 1562 aa8.22□□□□□ -1.09
PGBD4-201ENST00000397766 NCLP19338 710 aaKnown RBP8.22□□□□□ -1.09
PGBD4-201ENST00000397766 PLEKHD1A6NEE1 506 aa8.21□□□□□ -1.1
PGBD4-201ENST00000397766 KDM2AQ9Y2K7 1162 aa8.21□□□□□ -1.1
PGBD4-201ENST00000397766 PPP1R15AO75807 674 aaPredicted RBP8.21□□□□□ -1.1
PGBD4-201ENST00000397766 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
PGBD4-201ENST00000397766 GOLGA6L22H0YM25 854 aa8.2□□□□□ -1.1
PGBD4-201ENST00000397766 CASC1Q6TDU7 716 aa8.19□□□□□ -1.1
PGBD4-201ENST00000397766 SALL2Q9Y467 1007 aaPredicted RBP8.19□□□□□ -1.1
PGBD4-201ENST00000397766 CHMP4BQ9H444 224 aaKnown RBP8.18□□□□□ -1.1
PGBD4-201ENST00000397766 HAP1P54257 671 aaPredicted RBP8.18□□□□□ -1.1
PGBD4-201ENST00000397766 CEP162Q5TB80 1403 aa8.17□□□□□ -1.1
PGBD4-201ENST00000397766 KIF27Q86VH2 1401 aa8.17□□□□□ -1.1
PGBD4-201ENST00000397766 CEP164Q9UPV0 1460 aa8.17□□□□□ -1.1
PGBD4-201ENST00000397766 A0A0G2JS52 829 aa8.16□□□□□ -1.1
PGBD4-201ENST00000397766 WRNQ14191 1432 aaPredicted RBP eCLIP8.16□□□□□ -1.1
PGBD4-201ENST00000397766 KNSTRNQ9Y448 316 aa8.16□□□□□ -1.1
PGBD4-201ENST00000397766 TNIKQ9UKE5 1360 aa8.15□□□□□ -1.1
PGBD4-201ENST00000397766 RRP7BPQ9NSQ0 103 aa8.15□□□□□ -1.11
PGBD4-201ENST00000397766 BAZ1BQ9UIG0 1483 aaKnown RBP8.14□□□□□ -1.11
PGBD4-201ENST00000397766 MS4A1P11836 297 aa8.14□□□□□ -1.11
PGBD4-201ENST00000397766 NBR1Q14596 966 aa8.13□□□□□ -1.11
PGBD4-201ENST00000397766 NUDCQ9Y266 331 aa8.13□□□□□ -1.11
PGBD4-201ENST00000397766 TRIM44Q96DX7 344 aaPredicted RBP8.13□□□□□ -1.11
PGBD4-201ENST00000397766 CFDP1Q9UEE9 299 aaPredicted RBP8.13□□□□□ -1.11
PGBD4-201ENST00000397766 PNNQ9H307 717 aaKnown RBP8.13□□□□□ -1.11
PGBD4-201ENST00000397766 MIER1Q8N108 512 aa8.13□□□□□ -1.11
PGBD4-201ENST00000397766 ZRSR1Q15695 479 aaKnown RBP8.12□□□□□ -1.11
PGBD4-201ENST00000397766 PPM1GO15355 546 aaPredicted RBP8.12□□□□□ -1.11
PGBD4-201ENST00000397766 MAPK8IP3Q9UPT6 1336 aa8.12□□□□□ -1.11
PGBD4-201ENST00000397766 FTSJ3Q8IY81 847 aaKnown RBP8.11□□□□□ -1.11
PGBD4-201ENST00000397766 CARD11Q9BXL7 1154 aa8.11□□□□□ -1.11
PGBD4-201ENST00000397766 KCNH8Q96L42 1107 aa8.1□□□□□ -1.11
PGBD4-201ENST00000397766 ZBTB7CA1YPR0 619 aa8.1□□□□□ -1.11
PGBD4-201ENST00000397766 FHAD1B1AJZ9 1412 aa8.1□□□□□ -1.11
PGBD4-201ENST00000397766 TIMELESSQ9UNS1 1208 aa8.09□□□□□ -1.11
PGBD4-201ENST00000397766 KANK1Q14678 1352 aa8.09□□□□□ -1.12
PGBD4-201ENST00000397766 CFAP44Q96MT7 982 aa8.08□□□□□ -1.12
PGBD4-201ENST00000397766 GOLGA6L6A8MZA4 724 aa8.08□□□□□ -1.12
PGBD4-201ENST00000397766 CCNB3Q8WWL7 1395 aa8.07□□□□□ -1.12
PGBD4-201ENST00000397766 HDGFP51858 240 aaKnown RBP8.07□□□□□ -1.12
PGBD4-201ENST00000397766 PPP4R2Q9NY27 417 aa8.07□□□□□ -1.12
PGBD4-201ENST00000397766 PTMAP06454 111 aaKnown RBP8.06□□□□□ -1.12
PGBD4-201ENST00000397766 IRX6P78412 446 aaPredicted RBP8.06□□□□□ -1.12
PGBD4-201ENST00000397766 ARXQ96QS3 562 aa8.06□□□□□ -1.12
PGBD4-201ENST00000397766 TNNT2P45379 298 aaPredicted RBP8.06□□□□□ -1.12
PGBD4-201ENST00000397766 POGKQ9P215 609 aa8.06□□□□□ -1.12
PGBD4-201ENST00000397766 RGL3Q3MIN7 710 aa8.06□□□□□ -1.12
PGBD4-201ENST00000397766 BAZ1AQ9NRL2 1556 aaPredicted RBP8.05□□□□□ -1.12
PGBD4-201ENST00000397766 TMF1P82094 1093 aa8.04□□□□□ -1.12
PGBD4-201ENST00000397766 ERICH6BQ5W0A0 696 aa8.04□□□□□ -1.12
PGBD4-201ENST00000397766 HIRIP3Q9BW71 556 aaPredicted RBP8.03□□□□□ -1.12
PGBD4-201ENST00000397766 PDS5BQ9NTI5 1447 aa8.02□□□□□ -1.12
PGBD4-201ENST00000397766 NRDCO43847 1150 aa8.02□□□□□ -1.13
PGBD4-201ENST00000397766 CECR2Q9BXF3 1484 aa8.02□□□□□ -1.13
PGBD4-201ENST00000397766 SENP3Q9H4L4 574 aaPredicted RBP8.02□□□□□ -1.13
PGBD4-201ENST00000397766 CCER2I3L3R5 266 aa8.01□□□□□ -1.13
PGBD4-201ENST00000397766 MCCP23508 829 aa8□□□□□ -1.13
PGBD4-201ENST00000397766 OS9Q13438 667 aaPredicted RBP8□□□□□ -1.13
PGBD4-201ENST00000397766 LAS1LQ9Y4W2 734 aaKnown RBP8□□□□□ -1.13
PGBD4-201ENST00000397766 HSP90AB1P08238 724 aaKnown RBP8□□□□□ -1.13
PGBD4-201ENST00000397766 SUPT16HQ9Y5B9 1047 aaKnown RBP8□□□□□ -1.13
PGBD4-201ENST00000397766 PTMSP20962 102 aa7.99□□□□□ -1.13
PGBD4-201ENST00000397766 PLEKHG5O94827 1062 aa7.99□□□□□ -1.13
PGBD4-201ENST00000397766 DNTTIP2Q5QJE6 756 aaKnown RBP7.99□□□□□ -1.13
PGBD4-201ENST00000397766 ARHGAP35Q9NRY4 1499 aa7.99□□□□□ -1.13
PGBD4-201ENST00000397766 NOP58Q9Y2X3 529 aaKnown RBP7.98□□□□□ -1.13
PGBD4-201ENST00000397766 CARMIL1Q5VZK9 1371 aa7.98□□□□□ -1.13
PGBD4-201ENST00000397766 HSCBQ8IWL3 235 aa7.98□□□□□ -1.13
PGBD4-201ENST00000397766 DCAF8L1A6NGE4 600 aa7.98□□□□□ -1.13
PGBD4-201ENST00000397766 CALD1Q05682 793 aaKnown RBP7.98□□□□□ -1.13
PGBD4-201ENST00000397766 FRAT1Q92837 279 aaPredicted RBP7.98□□□□□ -1.13
PGBD4-201ENST00000397766 CHMP4AQ9BY43 222 aa7.97□□□□□ -1.13
PGBD4-201ENST00000397766 SETD5Q9C0A6 1442 aa7.97□□□□□ -1.13
PGBD4-201ENST00000397766 EIF4G1Q04637 1599 aaKnown RBP7.97□□□□□ -1.13
PGBD4-201ENST00000397766 FGD1P98174 961 aa7.97□□□□□ -1.13
PGBD4-201ENST00000397766 NEUROD2Q15784 382 aa7.97□□□□□ -1.13
PGBD4-201ENST00000397766 L1TD1Q5T7N2 865 aaKnown RBP7.97□□□□□ -1.13
PGBD4-201ENST00000397766 CARMIL2Q6F5E8 1435 aa7.97□□□□□ -1.13
PGBD4-201ENST00000397766 KTN1Q86UP2 1357 aaKnown RBP7.96□□□□□ -1.13
PGBD4-201ENST00000397766 MLECQ14165 292 aa7.96□□□□□ -1.13
PGBD4-201ENST00000397766 U2SURPO15042 1029 aaKnown RBP7.96□□□□□ -1.13
PGBD4-201ENST00000397766 CC2D1BQ5T0F9 858 aaKnown RBP7.96□□□□□ -1.13
PGBD4-201ENST00000397766 KCNJ4P48050 445 aa7.96□□□□□ -1.14
PGBD4-201ENST00000397766 NPHP1O15259 732 aa7.96□□□□□ -1.14
PGBD4-201ENST00000397766 EIF3AQ14152 1382 aaKnown RBP7.96□□□□□ -1.14
PGBD4-201ENST00000397766 GOLGA2Q08379 1002 aa7.96□□□□□ -1.14
PGBD4-201ENST00000397766 MORC1Q86VD1 984 aa7.96□□□□□ -1.14
PGBD4-201ENST00000397766 CUX2O14529 1486 aa7.96□□□□□ -1.14
PGBD4-201ENST00000397766 IPO8O15397 1037 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms