RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 C7P10643 843 aa8.13□□□□□ -1.11
TNFRSF17-202ENST00000396495 PRKCSHP14314 528 aaPredicted RBP8.12□□□□□ -1.11
TNFRSF17-202ENST00000396495 CDAN1Q8IWY9 1227 aa8.07□□□□□ -1.12
TNFRSF17-202ENST00000396495 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
TNFRSF17-202ENST00000396495 PHF12Q96QT6 1004 aa8.06□□□□□ -1.12
TNFRSF17-202ENST00000396495 STAG3Q9UJ98 1225 aa8.05□□□□□ -1.12
TNFRSF17-202ENST00000396495 ASTLQ6HA08 431 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF17-202ENST00000396495 NPM1P06748 294 aaKnown RBP eCLIP8.02□□□□□ -1.13
TNFRSF17-202ENST00000396495 CREBZFQ9NS37 354 aa8.02□□□□□ -1.13
TNFRSF17-202ENST00000396495 ATMINO43313 823 aaPredicted RBP8□□□□□ -1.13
TNFRSF17-202ENST00000396495 POTEJP0CG39 1038 aa8□□□□□ -1.13
TNFRSF17-202ENST00000396495 ZBTB22O15209 634 aa7.98□□□□□ -1.13
TNFRSF17-202ENST00000396495 MS4A3Q96HJ5 214 aa7.95□□□□□ -1.14
TNFRSF17-202ENST00000396495 MMRN1Q13201 1228 aa7.91□□□□□ -1.14
TNFRSF17-202ENST00000396495 ATN1P54259 1190 aaPredicted RBP7.87□□□□□ -1.15
TNFRSF17-202ENST00000396495 SPNS2Q8IVW8 549 aa7.86□□□□□ -1.15
TNFRSF17-202ENST00000396495 SEC24BO95487 1268 aa7.85□□□□□ -1.15
TNFRSF17-202ENST00000396495 ST18O60284 1047 aa7.81□□□□□ -1.16
TNFRSF17-202ENST00000396495 NISCHQ9Y2I1 1504 aa7.8□□□□□ -1.16
TNFRSF17-202ENST00000396495 SLAIN1Q8ND83 568 aa7.79□□□□□ -1.16
TNFRSF17-202ENST00000396495 POTEFA5A3E0 1075 aa7.78□□□□□ -1.16
TNFRSF17-202ENST00000396495 TIE1P35590 1138 aa7.77□□□□□ -1.17
TNFRSF17-202ENST00000396495 TMEM121BQ9BXQ6 578 aaPredicted RBP7.77□□□□□ -1.17
TNFRSF17-202ENST00000396495 TSPYL2Q9H2G4 693 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF17-202ENST00000396495 BMP2KQ9NSY1 1161 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF17-202ENST00000396495 MNX1P50219 401 aaPredicted RBP7.74□□□□□ -1.17
TNFRSF17-202ENST00000396495 SNPHO15079 494 aa7.73□□□□□ -1.17
TNFRSF17-202ENST00000396495 IER5LQ5T953 404 aa7.72□□□□□ -1.17
TNFRSF17-202ENST00000396495 KIF12Q96FN5 646 aa7.71□□□□□ -1.18
TNFRSF17-202ENST00000396495 COLQQ9Y215 455 aaPredicted RBP7.7□□□□□ -1.18
TNFRSF17-202ENST00000396495 CCDC61Q9Y6R9 512 aa7.7□□□□□ -1.18
TNFRSF17-202ENST00000396495 ARXQ96QS3 562 aa7.68□□□□□ -1.18
TNFRSF17-202ENST00000396495 TTLL13PA6NNM8 815 aa7.66□□□□□ -1.18
TNFRSF17-202ENST00000396495 SPDYE4A6NLX3 237 aa7.63□□□□□ -1.19
TNFRSF17-202ENST00000396495 MAP3K13O43283 966 aa7.63□□□□□ -1.19
TNFRSF17-202ENST00000396495 PLCG2P16885 1265 aa7.63□□□□□ -1.19
TNFRSF17-202ENST00000396495 TRIM35Q9UPQ4 493 aa7.63□□□□□ -1.19
TNFRSF17-202ENST00000396495 TRPC6Q9Y210 931 aa7.63□□□□□ -1.19
TNFRSF17-202ENST00000396495 MARVELD3Q96A59 401 aa7.61□□□□□ -1.19
TNFRSF17-202ENST00000396495 PLEKHG5O94827 1062 aa7.59□□□□□ -1.19
TNFRSF17-202ENST00000396495 EIF5BO60841 1220 aaKnown RBP7.58□□□□□ -1.2
TNFRSF17-202ENST00000396495 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.58□□□□□ -1.2
TNFRSF17-202ENST00000396495 EMP3P54852 163 aa7.57□□□□□ -1.2
TNFRSF17-202ENST00000396495 SGIP1Q9BQI5 828 aa7.57□□□□□ -1.2
TNFRSF17-202ENST00000396495 BCL11AQ9H165 835 aa7.56□□□□□ -1.2
TNFRSF17-202ENST00000396495 PCDHB13Q9Y5F0 798 aa7.52□□□□□ -1.21
TNFRSF17-202ENST00000396495 HS3ST6Q96QI5 342 aa7.5□□□□□ -1.21
TNFRSF17-202ENST00000396495 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
TNFRSF17-202ENST00000396495 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
TNFRSF17-202ENST00000396495 FAM205CA6NFA0 338 aa7.48□□□□□ -1.21
TNFRSF17-202ENST00000396495 TMEM106CQ9BVX2 250 aa7.48□□□□□ -1.21
TNFRSF17-202ENST00000396495 OCEL1Q9H607 264 aa7.47□□□□□ -1.21
TNFRSF17-202ENST00000396495 RTN4Q9NQC3 1192 aaKnown RBP7.47□□□□□ -1.21
TNFRSF17-202ENST00000396495 IRX5P78411 483 aaPredicted RBP7.46□□□□□ -1.22
TNFRSF17-202ENST00000396495 RNF166Q96A37 237 aaPredicted RBP7.46□□□□□ -1.22
TNFRSF17-202ENST00000396495 RANGAP1P46060 587 aaPredicted RBP7.44□□□□□ -1.22
TNFRSF17-202ENST00000396495 C3orf67Q6ZVT6 689 aa7.44□□□□□ -1.22
TNFRSF17-202ENST00000396495 RASEFQ8IZ41 740 aa7.44□□□□□ -1.22
TNFRSF17-202ENST00000396495 AMER1Q5JTC6 1135 aaPredicted RBP7.43□□□□□ -1.22
TNFRSF17-202ENST00000396495 FAM9AQ8IZU1 332 aaPredicted RBP7.4□□□□□ -1.22
TNFRSF17-202ENST00000396495 IFNL1Q8IU54 200 aa7.39□□□□□ -1.23
TNFRSF17-202ENST00000396495 MIER1Q8N108 512 aa7.39□□□□□ -1.23
TNFRSF17-202ENST00000396495 L3MBTL3Q96JM7 780 aaPredicted RBP7.37□□□□□ -1.23
TNFRSF17-202ENST00000396495 MYT1LQ9UL68 1186 aa7.37□□□□□ -1.23
TNFRSF17-202ENST00000396495 POTEB3A0JP26 581 aa7.36□□□□□ -1.23
TNFRSF17-202ENST00000396495 POTEBQ6S5H4 581 aa7.36□□□□□ -1.23
TNFRSF17-202ENST00000396495 ZBTB47Q9UFB7 747 aaPredicted RBP7.35□□□□□ -1.23
TNFRSF17-202ENST00000396495 HOMEZQ8IX15 550 aa7.33□□□□□ -1.24
TNFRSF17-202ENST00000396495 EHMT2Q96KQ7 1210 aa7.33□□□□□ -1.24
TNFRSF17-202ENST00000396495 PTGER2P43116 358 aa7.32□□□□□ -1.24
TNFRSF17-202ENST00000396495 FAM212AQ96EL1 285 aa7.32□□□□□ -1.24
TNFRSF17-202ENST00000396495 TIMELESSQ9UNS1 1208 aa7.32□□□□□ -1.24
TNFRSF17-202ENST00000396495 ERBB3P21860 1342 aa7.3□□□□□ -1.24
TNFRSF17-202ENST00000396495 ZNF710Q8N1W2 664 aa7.3□□□□□ -1.24
TNFRSF17-202ENST00000396495 GOLGA2Q08379 1002 aa7.29□□□□□ -1.24
TNFRSF17-202ENST00000396495 PLCD3Q8N3E9 789 aa7.29□□□□□ -1.24
TNFRSF17-202ENST00000396495 UBE2Q2Q8WVN8 375 aa7.28□□□□□ -1.24
TNFRSF17-202ENST00000396495 MKRN3Q13064 507 aaKnown RBP7.26□□□□□ -1.25
TNFRSF17-202ENST00000396495 HOXB1P14653 301 aaPredicted RBP7.25□□□□□ -1.25
TNFRSF17-202ENST00000396495 PROM2Q8N271 834 aa7.25□□□□□ -1.25
TNFRSF17-202ENST00000396495 G3V3G9 751 aa7.24□□□□□ -1.25
TNFRSF17-202ENST00000396495 DCAF8Q5TAQ9 597 aa7.24□□□□□ -1.25
TNFRSF17-202ENST00000396495 KLHL34Q8N239 644 aa7.24□□□□□ -1.25
TNFRSF17-202ENST00000396495 RIMBP2O15034 1052 aa7.23□□□□□ -1.25
TNFRSF17-202ENST00000396495 DOK7Q18PE1 504 aa7.23□□□□□ -1.25
TNFRSF17-202ENST00000396495 PDCD7Q8N8D1 485 aaKnown RBP7.22□□□□□ -1.25
TNFRSF17-202ENST00000396495 NUBP1P53384 320 aa7.21□□□□□ -1.26
TNFRSF17-202ENST00000396495 HRCP23327 699 aa7.19□□□□□ -1.26
TNFRSF17-202ENST00000396495 VARS2Q5ST30 1063 aaKnown RBP7.19□□□□□ -1.26
TNFRSF17-202ENST00000396495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.19□□□□□ -1.26
TNFRSF17-202ENST00000396495 CENPBP07199 599 aaPredicted RBP7.17□□□□□ -1.26
TNFRSF17-202ENST00000396495 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
TNFRSF17-202ENST00000396495 HOXB3P14651 431 aaPredicted RBP7.16□□□□□ -1.26
TNFRSF17-202ENST00000396495 ZNF687Q8N1G0 1237 aa7.16□□□□□ -1.26
TNFRSF17-202ENST00000396495 PODXL2Q9NZ53 605 aa7.16□□□□□ -1.26
TNFRSF17-202ENST00000396495 TULP1O00294 542 aaPredicted RBP7.14□□□□□ -1.27
TNFRSF17-202ENST00000396495 PYGBP11216 843 aa7.14□□□□□ -1.27
TNFRSF17-202ENST00000396495 CSRNP3Q8WYN3 585 aa7.14□□□□□ -1.27
TNFRSF17-202ENST00000396495 PCDHB8Q9UN66 801 aa7.14□□□□□ -1.27
TNFRSF17-202ENST00000396495 ZNF467Q7Z7K2 595 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms