RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 ZNF579Q8NAF0 562 aaKnown RBP21.24■□□□□ 0.99
LST1-212ENST00000396101 NUBP1P53384 320 aa21.19■□□□□ 0.98
LST1-212ENST00000396101 RASEFQ8IZ41 740 aa21.19■□□□□ 0.98
LST1-212ENST00000396101 GABBR2O75899 941 aa21.16■□□□□ 0.98
LST1-212ENST00000396101 PAK3O75914 559 aaPredicted RBP21.16■□□□□ 0.98
LST1-212ENST00000396101 IFNLR1Q8IU57 520 aaPredicted RBP21.11■□□□□ 0.97
LST1-212ENST00000396101 TSPYL2Q9H2G4 693 aaPredicted RBP21.09■□□□□ 0.97
LST1-212ENST00000396101 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.97
LST1-212ENST00000396101 PHF12Q96QT6 1004 aa21.06■□□□□ 0.96
LST1-212ENST00000396101 UNC13AQ9UPW8 1703 aa21.05■□□□□ 0.96
LST1-212ENST00000396101 CLCN6P51797 869 aa21.04■□□□□ 0.96
LST1-212ENST00000396101 KLHL34Q8N239 644 aa21■□□□□ 0.95
LST1-212ENST00000396101 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
LST1-212ENST00000396101 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
LST1-212ENST00000396101 FAM212AQ96EL1 285 aa20.92■□□□□ 0.94
LST1-212ENST00000396101 GALR2O43603 387 aaPredicted RBP20.91■□□□□ 0.94
LST1-212ENST00000396101 KIF12Q96FN5 646 aa20.87■□□□□ 0.93
LST1-212ENST00000396101 SPOCK2Q92563 424 aa20.86■□□□□ 0.93
LST1-212ENST00000396101 MS4A3Q96HJ5 214 aa20.83■□□□□ 0.93
LST1-212ENST00000396101 POTEIP0CG38 1075 aa20.8■□□□□ 0.92
LST1-212ENST00000396101 DCAF8Q5TAQ9 597 aa20.78■□□□□ 0.92
LST1-212ENST00000396101 MAP3K13O43283 966 aa20.77■□□□□ 0.92
LST1-212ENST00000396101 GSE1Q14687 1217 aa20.72■□□□□ 0.91
LST1-212ENST00000396101 SGIP1Q9BQI5 828 aa20.67■□□□□ 0.9
LST1-212ENST00000396101 PYGBP11216 843 aa20.64■□□□□ 0.89
LST1-212ENST00000396101 DCBLD2Q96PD2 775 aa20.64■□□□□ 0.89
LST1-212ENST00000396101 TRPC6Q9Y210 931 aa20.62■□□□□ 0.89
LST1-212ENST00000396101 PCDHB13Q9Y5F0 798 aa20.61■□□□□ 0.89
LST1-212ENST00000396101 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
LST1-212ENST00000396101 CHRM1P11229 460 aaPredicted RBP20.57■□□□□ 0.88
LST1-212ENST00000396101 IFNL1Q8IU54 200 aa20.57■□□□□ 0.88
LST1-212ENST00000396101 ASTLQ6HA08 431 aaPredicted RBP20.55■□□□□ 0.88
LST1-212ENST00000396101 CIZ1Q9ULV3 898 aaPredicted RBP20.55■□□□□ 0.88
LST1-212ENST00000396101 ATMINO43313 823 aaPredicted RBP20.51■□□□□ 0.87
LST1-212ENST00000396101 TIE1P35590 1138 aa20.49■□□□□ 0.87
LST1-212ENST00000396101 BMP2KQ9NSY1 1161 aaPredicted RBP20.49■□□□□ 0.87
LST1-212ENST00000396101 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
LST1-212ENST00000396101 ATN1P54259 1190 aaPredicted RBP20.42■□□□□ 0.86
LST1-212ENST00000396101 PCDHB8Q9UN66 801 aa20.42■□□□□ 0.86
LST1-212ENST00000396101 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
LST1-212ENST00000396101 TTLL13PA6NNM8 815 aa20.39■□□□□ 0.85
LST1-212ENST00000396101 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
LST1-212ENST00000396101 CC2D2AQ9P2K1 1620 aa20.36■□□□□ 0.85
LST1-212ENST00000396101 ZNF467Q7Z7K2 595 aaPredicted RBP20.36■□□□□ 0.85
LST1-212ENST00000396101 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
LST1-212ENST00000396101 TMEM106CQ9BVX2 250 aa20.28■□□□□ 0.84
LST1-212ENST00000396101 PKD2Q13563 968 aa20.25■□□□□ 0.83
LST1-212ENST00000396101 SLC39A7Q92504 469 aa20.25■□□□□ 0.83
LST1-212ENST00000396101 RNF25Q96BH1 459 aaPredicted RBP20.24■□□□□ 0.83
LST1-212ENST00000396101 METRNQ9UJH8 293 aa20.23■□□□□ 0.83
LST1-212ENST00000396101 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
LST1-212ENST00000396101 C7P10643 843 aa20.21■□□□□ 0.83
LST1-212ENST00000396101 LHX8Q68G74 356 aa20.18■□□□□ 0.82
LST1-212ENST00000396101 PSEN1P49768 467 aa20.17■□□□□ 0.82
LST1-212ENST00000396101 PDAP1Q13442 181 aaKnown RBP20.16■□□□□ 0.82
LST1-212ENST00000396101 POTEFA5A3E0 1075 aa20.15■□□□□ 0.82
LST1-212ENST00000396101 POTEB2H3BUK9 544 aa20.13■□□□□ 0.81
LST1-212ENST00000396101 IER5LQ5T953 404 aa20.12■□□□□ 0.81
LST1-212ENST00000396101 RIOK3O14730 519 aaKnown RBP20.09■□□□□ 0.81
LST1-212ENST00000396101 ECM2O94769 699 aaPredicted RBP20.08■□□□□ 0.81
LST1-212ENST00000396101 COLQQ9Y215 455 aaPredicted RBP20.05■□□□□ 0.8
LST1-212ENST00000396101 IRX5P78411 483 aaPredicted RBP20■□□□□ 0.79
LST1-212ENST00000396101 RGL2O15211 777 aa19.99■□□□□ 0.79
LST1-212ENST00000396101 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
LST1-212ENST00000396101 VGFO15240 615 aaPredicted RBP19.98■□□□□ 0.79
LST1-212ENST00000396101 POTEJP0CG39 1038 aa19.98■□□□□ 0.79
LST1-212ENST00000396101 ATAD2BQ9ULI0 1458 aa19.97■□□□□ 0.79
LST1-212ENST00000396101 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
LST1-212ENST00000396101 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
LST1-212ENST00000396101 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.94■□□□□ 0.78
LST1-212ENST00000396101 ZFP91Q96JP5 570 aaPredicted RBP19.94■□□□□ 0.78
LST1-212ENST00000396101 MROH2BQ7Z745 1585 aa19.92■□□□□ 0.78
LST1-212ENST00000396101 SEC24BO95487 1268 aa19.92■□□□□ 0.78
LST1-212ENST00000396101 CABP2Q9NPB3 220 aa19.91■□□□□ 0.78
LST1-212ENST00000396101 ILDR1Q86SU0 546 aaPredicted RBP19.87■□□□□ 0.77
LST1-212ENST00000396101 OTUD5Q96G74 571 aa19.87■□□□□ 0.77
LST1-212ENST00000396101 GOLGA2Q08379 1002 aa19.86■□□□□ 0.77
LST1-212ENST00000396101 MKRN3Q13064 507 aaKnown RBP19.86■□□□□ 0.77
LST1-212ENST00000396101 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
LST1-212ENST00000396101 PLCG2P16885 1265 aa19.85■□□□□ 0.77
LST1-212ENST00000396101 OCEL1Q9H607 264 aa19.85■□□□□ 0.77
LST1-212ENST00000396101 PDCD7Q8N8D1 485 aaKnown RBP19.84■□□□□ 0.77
LST1-212ENST00000396101 TAOK2Q9UL54 1235 aa19.81■□□□□ 0.76
LST1-212ENST00000396101 EFCAB3Q8N7B9 438 aa19.78■□□□□ 0.76
LST1-212ENST00000396101 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
LST1-212ENST00000396101 PEG3Q9GZU2 1588 aa19.75■□□□□ 0.75
LST1-212ENST00000396101 BCL11BQ9C0K0 894 aaPredicted RBP19.75■□□□□ 0.75
LST1-212ENST00000396101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.75■□□□□ 0.75
LST1-212ENST00000396101 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
LST1-212ENST00000396101 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
LST1-212ENST00000396101 MAMSTRQ6ZN01 415 aa19.7■□□□□ 0.74
LST1-212ENST00000396101 STK25O00506 426 aa19.69■□□□□ 0.74
LST1-212ENST00000396101 STK24Q9Y6E0 443 aa19.68■□□□□ 0.74
LST1-212ENST00000396101 WIZO95785 1651 aa19.67■□□□□ 0.74
LST1-212ENST00000396101 SCUBE2Q9NQ36 999 aa19.64■□□□□ 0.73
LST1-212ENST00000396101 SOX12O15370 315 aa19.63■□□□□ 0.73
LST1-212ENST00000396101 DPY19L2Q6NUT2 758 aa19.63■□□□□ 0.73
LST1-212ENST00000396101 HS6ST3Q8IZP7 471 aa19.58■□□□□ 0.72
LST1-212ENST00000396101 MS4A4AQ96JQ5 239 aa19.58■□□□□ 0.72
LST1-212ENST00000396101 PHF8Q9UPP1 1060 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms