RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
AP3S1-202ENST00000395548 NUBP1P53384 320 aa13.25□□□□□ -0.29
AP3S1-202ENST00000395548 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
AP3S1-202ENST00000395548 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
AP3S1-202ENST00000395548 FAM212AQ96EL1 285 aa13.2□□□□□ -0.3
AP3S1-202ENST00000395548 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
AP3S1-202ENST00000395548 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
AP3S1-202ENST00000395548 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
AP3S1-202ENST00000395548 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
AP3S1-202ENST00000395548 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
AP3S1-202ENST00000395548 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
AP3S1-202ENST00000395548 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
AP3S1-202ENST00000395548 GSE1Q14687 1217 aa13.08□□□□□ -0.32
AP3S1-202ENST00000395548 MAP3K13O43283 966 aa13.06□□□□□ -0.32
AP3S1-202ENST00000395548 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
AP3S1-202ENST00000395548 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
AP3S1-202ENST00000395548 PCDHB13Q9Y5F0 798 aa13□□□□□ -0.33
AP3S1-202ENST00000395548 PYGBP11216 843 aa12.97□□□□□ -0.33
AP3S1-202ENST00000395548 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
AP3S1-202ENST00000395548 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
AP3S1-202ENST00000395548 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
AP3S1-202ENST00000395548 TIE1P35590 1138 aa12.92□□□□□ -0.34
AP3S1-202ENST00000395548 CHRM1P11229 460 aaPredicted RBP12.91□□□□□ -0.34
AP3S1-202ENST00000395548 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
AP3S1-202ENST00000395548 BMP2KQ9NSY1 1161 aaPredicted RBP12.88□□□□□ -0.35
AP3S1-202ENST00000395548 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
AP3S1-202ENST00000395548 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
AP3S1-202ENST00000395548 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
AP3S1-202ENST00000395548 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
AP3S1-202ENST00000395548 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
AP3S1-202ENST00000395548 LHX8Q68G74 356 aa12.84□□□□□ -0.35
AP3S1-202ENST00000395548 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
AP3S1-202ENST00000395548 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
AP3S1-202ENST00000395548 C7P10643 843 aa12.82□□□□□ -0.36
AP3S1-202ENST00000395548 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
AP3S1-202ENST00000395548 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
AP3S1-202ENST00000395548 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
AP3S1-202ENST00000395548 CCDC180Q9P1Z9 1646 aa12.76□□□□□ -0.37
AP3S1-202ENST00000395548 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
AP3S1-202ENST00000395548 IER5LQ5T953 404 aa12.71□□□□□ -0.37
AP3S1-202ENST00000395548 PSEN1P49768 467 aa12.69□□□□□ -0.38
AP3S1-202ENST00000395548 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
AP3S1-202ENST00000395548 SEC24BO95487 1268 aa12.67□□□□□ -0.38
AP3S1-202ENST00000395548 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
AP3S1-202ENST00000395548 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
AP3S1-202ENST00000395548 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
AP3S1-202ENST00000395548 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
AP3S1-202ENST00000395548 POTEFA5A3E0 1075 aa12.59□□□□□ -0.39
AP3S1-202ENST00000395548 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
AP3S1-202ENST00000395548 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
AP3S1-202ENST00000395548 COLQQ9Y215 455 aaPredicted RBP12.59□□□□□ -0.39
AP3S1-202ENST00000395548 PLCG2P16885 1265 aa12.58□□□□□ -0.4
AP3S1-202ENST00000395548 MAMSTRQ6ZN01 415 aa12.58□□□□□ -0.4
AP3S1-202ENST00000395548 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
AP3S1-202ENST00000395548 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
AP3S1-202ENST00000395548 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
AP3S1-202ENST00000395548 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
AP3S1-202ENST00000395548 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
AP3S1-202ENST00000395548 PKD2Q13563 968 aa12.55□□□□□ -0.4
AP3S1-202ENST00000395548 OTUD5Q96G74 571 aa12.53□□□□□ -0.4
AP3S1-202ENST00000395548 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
AP3S1-202ENST00000395548 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
AP3S1-202ENST00000395548 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
AP3S1-202ENST00000395548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.48□□□□□ -0.41
AP3S1-202ENST00000395548 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
AP3S1-202ENST00000395548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.41
AP3S1-202ENST00000395548 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
AP3S1-202ENST00000395548 RGL2O15211 777 aa12.43□□□□□ -0.42
AP3S1-202ENST00000395548 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
AP3S1-202ENST00000395548 EFCAB3Q8N7B9 438 aa12.41□□□□□ -0.42
AP3S1-202ENST00000395548 ILDR1Q86SU0 546 aaPredicted RBP12.4□□□□□ -0.42
AP3S1-202ENST00000395548 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
AP3S1-202ENST00000395548 SOX12O15370 315 aa12.38□□□□□ -0.43
AP3S1-202ENST00000395548 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
AP3S1-202ENST00000395548 STK25O00506 426 aa12.37□□□□□ -0.43
AP3S1-202ENST00000395548 STK24Q9Y6E0 443 aa12.37□□□□□ -0.43
AP3S1-202ENST00000395548 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
AP3S1-202ENST00000395548 NACADO15069 1562 aa12.35□□□□□ -0.43
AP3S1-202ENST00000395548 G3V3G9 751 aa12.33□□□□□ -0.44
AP3S1-202ENST00000395548 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
AP3S1-202ENST00000395548 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
AP3S1-202ENST00000395548 SLAIN1Q8ND83 568 aa12.3□□□□□ -0.44
AP3S1-202ENST00000395548 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
AP3S1-202ENST00000395548 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
AP3S1-202ENST00000395548 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
AP3S1-202ENST00000395548 NLRP6P59044 892 aa12.27□□□□□ -0.45
AP3S1-202ENST00000395548 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
AP3S1-202ENST00000395548 CUX2O14529 1486 aa12.27□□□□□ -0.45
AP3S1-202ENST00000395548 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
AP3S1-202ENST00000395548 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
AP3S1-202ENST00000395548 MS4A4AQ96JQ5 239 aa12.21□□□□□ -0.45
AP3S1-202ENST00000395548 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
AP3S1-202ENST00000395548 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
AP3S1-202ENST00000395548 TMEM121BQ9BXQ6 578 aaPredicted RBP12.19□□□□□ -0.46
AP3S1-202ENST00000395548 MFRPQ9BY79 579 aa12.19□□□□□ -0.46
AP3S1-202ENST00000395548 UNC13AQ9UPW8 1703 aa12.19□□□□□ -0.46
AP3S1-202ENST00000395548 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
AP3S1-202ENST00000395548 SNPHO15079 494 aa12.16□□□□□ -0.46
AP3S1-202ENST00000395548 MICALL2Q8IY33 904 aa12.15□□□□□ -0.46
AP3S1-202ENST00000395548 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms