RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 NUTM2AQ8IVF1 878 aaPredicted RBP7□□□□□ -1.29
A1CF-207ENST00000395495 CHGAP10645 457 aaKnown RBP7□□□□□ -1.29
A1CF-207ENST00000395495 C14orf37Q86TY3 774 aa7□□□□□ -1.29
A1CF-207ENST00000395495 NCLP19338 710 aaKnown RBP7□□□□□ -1.29
A1CF-207ENST00000395495 TULP1O00294 542 aaPredicted RBP6.99□□□□□ -1.29
A1CF-207ENST00000395495 TRIM44Q96DX7 344 aaPredicted RBP6.99□□□□□ -1.29
A1CF-207ENST00000395495 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.99□□□□□ -1.29
A1CF-207ENST00000395495 ARID3CA6NKF2 412 aa6.98□□□□□ -1.29
A1CF-207ENST00000395495 CERKQ8TCT0 537 aa6.98□□□□□ -1.29
A1CF-207ENST00000395495 NCBP3Q53F19 620 aaKnown RBP6.98□□□□□ -1.29
A1CF-207ENST00000395495 NEUROD1Q13562 356 aa6.97□□□□□ -1.29
A1CF-207ENST00000395495 CUX2O14529 1486 aa6.97□□□□□ -1.29
A1CF-207ENST00000395495 EIF5BO60841 1220 aaKnown RBP6.96□□□□□ -1.3
A1CF-207ENST00000395495 GOLGA2Q08379 1002 aa6.96□□□□□ -1.3
A1CF-207ENST00000395495 ANP32EQ9BTT0 268 aa6.95□□□□□ -1.3
A1CF-207ENST00000395495 PRM3Q9NNZ6 103 aa6.95□□□□□ -1.3
A1CF-207ENST00000395495 CLSTN1O94985 981 aa6.95□□□□□ -1.3
A1CF-207ENST00000395495 PPP1R1BQ9UD71 204 aaPredicted RBP6.95□□□□□ -1.3
A1CF-207ENST00000395495 SCRIBQ14160 1630 aa6.94□□□□□ -1.3
A1CF-207ENST00000395495 TNNT2P45379 298 aaPredicted RBP6.94□□□□□ -1.3
A1CF-207ENST00000395495 L1TD1Q5T7N2 865 aaKnown RBP6.94□□□□□ -1.3
A1CF-207ENST00000395495 DIEXFQ68CQ4 756 aaKnown RBP6.94□□□□□ -1.3
A1CF-207ENST00000395495 EIF4G2P78344 907 aaKnown RBP eCLIP6.93□□□□□ -1.3
A1CF-207ENST00000395495 ZBTB7CA1YPR0 619 aa6.93□□□□□ -1.3
A1CF-207ENST00000395495 CCDC9Q9Y3X0 531 aaKnown RBP6.93□□□□□ -1.3
A1CF-207ENST00000395495 ARXQ96QS3 562 aa6.92□□□□□ -1.3
A1CF-207ENST00000395495 GOLGA6L6A8MZA4 724 aa6.92□□□□□ -1.3
A1CF-207ENST00000395495 TOM1O60784 492 aa6.91□□□□□ -1.3
A1CF-207ENST00000395495 PPP1R15AO75807 674 aaPredicted RBP6.91□□□□□ -1.3
A1CF-207ENST00000395495 HRCP23327 699 aa6.91□□□□□ -1.3
A1CF-207ENST00000395495 ZNF777Q9ULD5 760 aaPredicted RBP6.91□□□□□ -1.3
A1CF-207ENST00000395495 NRDCO43847 1150 aa6.91□□□□□ -1.3
A1CF-207ENST00000395495 GOLGA6L22H0YM25 854 aa6.9□□□□□ -1.3
A1CF-207ENST00000395495 ZRANB1Q9UGI0 708 aa6.9□□□□□ -1.3
A1CF-207ENST00000395495 HSPA2P54652 639 aa6.89□□□□□ -1.31
A1CF-207ENST00000395495 PLEKHG5O94827 1062 aa6.88□□□□□ -1.31
A1CF-207ENST00000395495 TMX4Q9H1E5 349 aaPredicted RBP6.88□□□□□ -1.31
A1CF-207ENST00000395495 CASC1Q6TDU7 716 aa6.88□□□□□ -1.31
A1CF-207ENST00000395495 RBM33Q96EV2 1170 aaKnown RBP6.87□□□□□ -1.31
A1CF-207ENST00000395495 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
A1CF-207ENST00000395495 CHAF1AQ13111 956 aaPredicted RBP6.86□□□□□ -1.31
A1CF-207ENST00000395495 CFAP44Q96MT7 982 aa6.86□□□□□ -1.31
A1CF-207ENST00000395495 SENP3-EIF4A1A0A087X0R7 540 aa6.85□□□□□ -1.31
A1CF-207ENST00000395495 CAPN15O75808 1086 aa6.85□□□□□ -1.31
A1CF-207ENST00000395495 KLHL34Q8N239 644 aa6.85□□□□□ -1.31
A1CF-207ENST00000395495 KIAA2012Q0VF49 1180 aa6.85□□□□□ -1.31
A1CF-207ENST00000395495 PTMAP06454 111 aaKnown RBP6.84□□□□□ -1.31
A1CF-207ENST00000395495 FKBP8Q14318 412 aa6.84□□□□□ -1.31
A1CF-207ENST00000395495 ISY1Q9ULR0 285 aaKnown RBP6.84□□□□□ -1.32
A1CF-207ENST00000395495 PNNQ9H307 717 aaKnown RBP6.83□□□□□ -1.32
A1CF-207ENST00000395495 BECN1Q14457 450 aa6.83□□□□□ -1.32
A1CF-207ENST00000395495 FGD1P98174 961 aa6.82□□□□□ -1.32
A1CF-207ENST00000395495 ILDR2Q71H61 639 aa6.81□□□□□ -1.32
A1CF-207ENST00000395495 CFAP53Q96M91 514 aa6.8□□□□□ -1.32
A1CF-207ENST00000395495 SMARCA2P51531 1590 aa6.79□□□□□ -1.32
A1CF-207ENST00000395495 CHMP4BQ9H444 224 aaKnown RBP6.79□□□□□ -1.32
A1CF-207ENST00000395495 NOC3LQ8WTT2 800 aaKnown RBP6.79□□□□□ -1.32
A1CF-207ENST00000395495 DNTTIP2Q5QJE6 756 aaKnown RBP6.79□□□□□ -1.32
A1CF-207ENST00000395495 LMOD2Q6P5Q4 547 aa6.78□□□□□ -1.32
A1CF-207ENST00000395495 OS9Q13438 667 aaPredicted RBP6.77□□□□□ -1.33
A1CF-207ENST00000395495 TSPY4P0CV99 314 aa6.76□□□□□ -1.33
A1CF-207ENST00000395495 TSPY10P0CW01 314 aa6.76□□□□□ -1.33
A1CF-207ENST00000395495 TMC1Q8TDI8 760 aa6.76□□□□□ -1.33
A1CF-207ENST00000395495 TONSLQ96HA7 1378 aa6.76□□□□□ -1.33
A1CF-207ENST00000395495 KCNJ4P48050 445 aa6.76□□□□□ -1.33
A1CF-207ENST00000395495 DDRGK1Q96HY6 314 aa6.75□□□□□ -1.33
A1CF-207ENST00000395495 GOLGA6L4A6NEF3 574 aa6.75□□□□□ -1.33
A1CF-207ENST00000395495 CEP89Q96ST8 783 aa6.75□□□□□ -1.33
A1CF-207ENST00000395495 CNKSR2Q8WXI2 1034 aa6.75□□□□□ -1.33
A1CF-207ENST00000395495 CCDC136Q96JN2 1154 aa6.75□□□□□ -1.33
A1CF-207ENST00000395495 USP35Q9P2H5 1018 aa6.75□□□□□ -1.33
A1CF-207ENST00000395495 P3H3Q8IVL6 736 aa6.74□□□□□ -1.33
A1CF-207ENST00000395495 NAP1L2Q9ULW6 460 aaPredicted RBP6.74□□□□□ -1.33
A1CF-207ENST00000395495 NACADO15069 1562 aa6.74□□□□□ -1.33
A1CF-207ENST00000395495 G3V3G9 751 aa6.73□□□□□ -1.33
A1CF-207ENST00000395495 DCAF8Q5TAQ9 597 aa6.73□□□□□ -1.33
A1CF-207ENST00000395495 GNL2Q13823 731 aaKnown RBP6.73□□□□□ -1.33
A1CF-207ENST00000395495 CCDC34Q96HJ3 373 aa6.73□□□□□ -1.33
A1CF-207ENST00000395495 CDCA8Q53HL2 280 aa6.73□□□□□ -1.33
A1CF-207ENST00000395495 HDGFP51858 240 aaKnown RBP6.72□□□□□ -1.33
A1CF-207ENST00000395495 JPH4Q96JJ6 628 aa6.72□□□□□ -1.33
A1CF-207ENST00000395495 A0A0U1RQG5 324 aaPredicted RBP6.72□□□□□ -1.33
A1CF-207ENST00000395495 TAOK2Q9UL54 1235 aa6.72□□□□□ -1.33
A1CF-207ENST00000395495 NUDCQ9Y266 331 aa6.71□□□□□ -1.34
A1CF-207ENST00000395495 ACIN1Q9UKV3 1341 aaKnown RBP6.71□□□□□ -1.34
A1CF-207ENST00000395495 MAPK8IP3Q9UPT6 1336 aa6.71□□□□□ -1.34
A1CF-207ENST00000395495 KDM4FA0A1W2PPD8 638 aa6.71□□□□□ -1.34
A1CF-207ENST00000395495 FTSJ3Q8IY81 847 aaKnown RBP6.7□□□□□ -1.34
A1CF-207ENST00000395495 MS4A1P11836 297 aa6.7□□□□□ -1.34
A1CF-207ENST00000395495 YY1P25490 414 aa6.7□□□□□ -1.34
A1CF-207ENST00000395495 SALL2Q9Y467 1007 aaPredicted RBP6.69□□□□□ -1.34
A1CF-207ENST00000395495 PLCB2Q00722 1185 aa6.69□□□□□ -1.34
A1CF-207ENST00000395495 CHMP4AQ9BY43 222 aa6.69□□□□□ -1.34
A1CF-207ENST00000395495 SYNJ2O15056 1496 aa6.69□□□□□ -1.34
A1CF-207ENST00000395495 HNRNPUQ00839 825 aaKnown RBP eCLIP6.69□□□□□ -1.34
A1CF-207ENST00000395495 MCCP23508 829 aa6.68□□□□□ -1.34
A1CF-207ENST00000395495 FAM9BQ8IZU0 186 aa6.68□□□□□ -1.34
A1CF-207ENST00000395495 HTATSF1O43719 755 aaKnown RBP6.68□□□□□ -1.34
A1CF-207ENST00000395495 TDRD9Q8NDG6 1382 aaKnown RBP6.67□□□□□ -1.34
A1CF-207ENST00000395495 ANO8Q9HCE9 1232 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms