RNA–Protein interactions for RNA: ENST00000395035.3

CDKL4-202, Transcript of cyclin dependent kinase like 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKL4, Length 1,140 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4-202ENST00000395035 C7P10643 843 aa13.36□□□□□ -0.27
CDKL4-202ENST00000395035 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
CDKL4-202ENST00000395035 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
CDKL4-202ENST00000395035 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
CDKL4-202ENST00000395035 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
CDKL4-202ENST00000395035 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDKL4-202ENST00000395035 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
CDKL4-202ENST00000395035 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
CDKL4-202ENST00000395035 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
CDKL4-202ENST00000395035 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
CDKL4-202ENST00000395035 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
CDKL4-202ENST00000395035 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
CDKL4-202ENST00000395035 SCUBE2Q9NQ36 999 aa13.23□□□□□ -0.29
CDKL4-202ENST00000395035 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
CDKL4-202ENST00000395035 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
CDKL4-202ENST00000395035 PROM2Q8N271 834 aa13.08□□□□□ -0.32
CDKL4-202ENST00000395035 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
CDKL4-202ENST00000395035 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
CDKL4-202ENST00000395035 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
CDKL4-202ENST00000395035 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
CDKL4-202ENST00000395035 FKBP8Q14318 412 aa13.02□□□□□ -0.33
CDKL4-202ENST00000395035 KIF12Q96FN5 646 aa13.02□□□□□ -0.33
CDKL4-202ENST00000395035 TRPC6Q9Y210 931 aa12.99□□□□□ -0.33
CDKL4-202ENST00000395035 TIE1P35590 1138 aa12.95□□□□□ -0.34
CDKL4-202ENST00000395035 COLQQ9Y215 455 aaPredicted RBP12.94□□□□□ -0.34
CDKL4-202ENST00000395035 MAP3K13O43283 966 aa12.89□□□□□ -0.35
CDKL4-202ENST00000395035 SEC24BO95487 1268 aa12.89□□□□□ -0.35
CDKL4-202ENST00000395035 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
CDKL4-202ENST00000395035 ST18O60284 1047 aa12.86□□□□□ -0.35
CDKL4-202ENST00000395035 MMRN1Q13201 1228 aa12.82□□□□□ -0.36
CDKL4-202ENST00000395035 IER5LQ5T953 404 aa12.81□□□□□ -0.36
CDKL4-202ENST00000395035 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
CDKL4-202ENST00000395035 SPNS2Q8IVW8 549 aa12.78□□□□□ -0.36
CDKL4-202ENST00000395035 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
CDKL4-202ENST00000395035 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
CDKL4-202ENST00000395035 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
CDKL4-202ENST00000395035 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
CDKL4-202ENST00000395035 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
CDKL4-202ENST00000395035 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
CDKL4-202ENST00000395035 PLCG2P16885 1265 aa12.62□□□□□ -0.39
CDKL4-202ENST00000395035 MIER1Q8N108 512 aa12.62□□□□□ -0.39
CDKL4-202ENST00000395035 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
CDKL4-202ENST00000395035 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
CDKL4-202ENST00000395035 SNPHO15079 494 aa12.56□□□□□ -0.4
CDKL4-202ENST00000395035 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
CDKL4-202ENST00000395035 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
CDKL4-202ENST00000395035 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
CDKL4-202ENST00000395035 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
CDKL4-202ENST00000395035 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
CDKL4-202ENST00000395035 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
CDKL4-202ENST00000395035 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
CDKL4-202ENST00000395035 NUBP1P53384 320 aa12.47□□□□□ -0.41
CDKL4-202ENST00000395035 KRTAP3-3Q9BYR6 98 aa12.42□□□□□ -0.42
CDKL4-202ENST00000395035 KRTAP3-2Q9BYR7 98 aa12.42□□□□□ -0.42
CDKL4-202ENST00000395035 EMP3P54852 163 aa12.4□□□□□ -0.42
CDKL4-202ENST00000395035 POTEB3A0JP26 581 aa12.38□□□□□ -0.43
CDKL4-202ENST00000395035 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
CDKL4-202ENST00000395035 POTEBQ6S5H4 581 aa12.38□□□□□ -0.43
CDKL4-202ENST00000395035 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
CDKL4-202ENST00000395035 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
CDKL4-202ENST00000395035 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
CDKL4-202ENST00000395035 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
CDKL4-202ENST00000395035 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
CDKL4-202ENST00000395035 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
CDKL4-202ENST00000395035 PYGBP11216 843 aa12.22□□□□□ -0.45
CDKL4-202ENST00000395035 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
CDKL4-202ENST00000395035 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
CDKL4-202ENST00000395035 L3MBTL3Q96JM7 780 aaPredicted RBP12.21□□□□□ -0.45
CDKL4-202ENST00000395035 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
CDKL4-202ENST00000395035 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
CDKL4-202ENST00000395035 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
CDKL4-202ENST00000395035 GSE1Q14687 1217 aa12.12□□□□□ -0.47
CDKL4-202ENST00000395035 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
CDKL4-202ENST00000395035 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
CDKL4-202ENST00000395035 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
CDKL4-202ENST00000395035 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
CDKL4-202ENST00000395035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDKL4-202ENST00000395035 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
CDKL4-202ENST00000395035 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
CDKL4-202ENST00000395035 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
CDKL4-202ENST00000395035 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
CDKL4-202ENST00000395035 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
CDKL4-202ENST00000395035 ERBB3P21860 1342 aa12.01□□□□□ -0.49
CDKL4-202ENST00000395035 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
CDKL4-202ENST00000395035 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
CDKL4-202ENST00000395035 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
CDKL4-202ENST00000395035 PKD2Q13563 968 aa11.98□□□□□ -0.49
CDKL4-202ENST00000395035 ZNF710Q8N1W2 664 aa11.98□□□□□ -0.49
CDKL4-202ENST00000395035 PSEN1P49768 467 aa11.95□□□□□ -0.5
CDKL4-202ENST00000395035 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
CDKL4-202ENST00000395035 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
CDKL4-202ENST00000395035 BOLA1Q9Y3E2 137 aa11.94□□□□□ -0.5
CDKL4-202ENST00000395035 BCANQ96GW7 911 aa11.93□□□□□ -0.5
CDKL4-202ENST00000395035 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
CDKL4-202ENST00000395035 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
CDKL4-202ENST00000395035 G3V3G9 751 aa11.9□□□□□ -0.5
CDKL4-202ENST00000395035 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
CDKL4-202ENST00000395035 ZNF687Q8N1G0 1237 aa11.87□□□□□ -0.51
CDKL4-202ENST00000395035 PTGER2P43116 358 aa11.86□□□□□ -0.51
CDKL4-202ENST00000395035 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms