RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 MRS2Q9HD23 443 aa21.43■■□□□ 1.02
TFAP2B-202ENST00000393655 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
TFAP2B-202ENST00000393655 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
TFAP2B-202ENST00000393655 CFAP53Q96M91 514 aa21.37■■□□□ 1.01
TFAP2B-202ENST00000393655 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
TFAP2B-202ENST00000393655 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
TFAP2B-202ENST00000393655 CDCA8Q53HL2 280 aa21.35■■□□□ 1.01
TFAP2B-202ENST00000393655 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
TFAP2B-202ENST00000393655 CLIP1P30622 1438 aa21.34■■□□□ 1.01
TFAP2B-202ENST00000393655 ARXQ96QS3 562 aa21.27■■□□□ 1
TFAP2B-202ENST00000393655 DCAF1Q9Y4B6 1507 aa21.26■□□□□ 0.99
TFAP2B-202ENST00000393655 CFDP1Q9UEE9 299 aaPredicted RBP21.26■□□□□ 0.99
TFAP2B-202ENST00000393655 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
TFAP2B-202ENST00000393655 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
TFAP2B-202ENST00000393655 RGL3Q3MIN7 710 aa21.24■□□□□ 0.99
TFAP2B-202ENST00000393655 NCLP19338 710 aaKnown RBP21.24■□□□□ 0.99
TFAP2B-202ENST00000393655 KNSTRNQ9Y448 316 aa21.21■□□□□ 0.99
TFAP2B-202ENST00000393655 EEA1Q15075 1411 aa21.21■□□□□ 0.99
TFAP2B-202ENST00000393655 EIF5BO60841 1220 aaKnown RBP21.19■□□□□ 0.98
TFAP2B-202ENST00000393655 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
TFAP2B-202ENST00000393655 POGKQ9P215 609 aa21.18■□□□□ 0.98
TFAP2B-202ENST00000393655 PPM1GO15355 546 aaPredicted RBP21.18■□□□□ 0.98
TFAP2B-202ENST00000393655 CASC1Q6TDU7 716 aa21.18■□□□□ 0.98
TFAP2B-202ENST00000393655 BECN1Q14457 450 aa21.17■□□□□ 0.98
TFAP2B-202ENST00000393655 LMOD2Q6P5Q4 547 aa21.17■□□□□ 0.98
TFAP2B-202ENST00000393655 NPHP1O15259 732 aa21.17■□□□□ 0.98
TFAP2B-202ENST00000393655 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
TFAP2B-202ENST00000393655 MAPK8IP3Q9UPT6 1336 aa21.15■□□□□ 0.98
TFAP2B-202ENST00000393655 NUDCQ9Y266 331 aa21.15■□□□□ 0.98
TFAP2B-202ENST00000393655 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
TFAP2B-202ENST00000393655 HDGFP51858 240 aaKnown RBP21.11■□□□□ 0.97
TFAP2B-202ENST00000393655 DDRGK1Q96HY6 314 aa21.11■□□□□ 0.97
TFAP2B-202ENST00000393655 GOLGA6L22H0YM25 854 aa21.1■□□□□ 0.97
TFAP2B-202ENST00000393655 CARD11Q9BXL7 1154 aa21.1■□□□□ 0.97
TFAP2B-202ENST00000393655 ZRSR1Q15695 479 aaKnown RBP21.1■□□□□ 0.97
TFAP2B-202ENST00000393655 FTSJ3Q8IY81 847 aaKnown RBP21.09■□□□□ 0.97
TFAP2B-202ENST00000393655 TRHP20396 242 aaPredicted RBP21.08■□□□□ 0.97
TFAP2B-202ENST00000393655 HIRIP3Q9BW71 556 aaPredicted RBP21.08■□□□□ 0.97
TFAP2B-202ENST00000393655 KANK1Q14678 1352 aa21.06■□□□□ 0.96
TFAP2B-202ENST00000393655 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
TFAP2B-202ENST00000393655 ANP32EQ9BTT0 268 aa21.05■□□□□ 0.96
TFAP2B-202ENST00000393655 LAS1LQ9Y4W2 734 aaKnown RBP21.04■□□□□ 0.96
TFAP2B-202ENST00000393655 PNNQ9H307 717 aaKnown RBP21.04■□□□□ 0.96
TFAP2B-202ENST00000393655 CHMP4BQ9H444 224 aaKnown RBP21.04■□□□□ 0.96
TFAP2B-202ENST00000393655 NBR1Q14596 966 aa21.03■□□□□ 0.96
TFAP2B-202ENST00000393655 GLIPR1L2Q4G1C9 344 aa21.02■□□□□ 0.96
TFAP2B-202ENST00000393655 IRX6P78412 446 aaPredicted RBP21■□□□□ 0.95
TFAP2B-202ENST00000393655 NACADO15069 1562 aa21■□□□□ 0.95
TFAP2B-202ENST00000393655 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
TFAP2B-202ENST00000393655 CCNB3Q8WWL7 1395 aa20.98■□□□□ 0.95
TFAP2B-202ENST00000393655 OS9Q13438 667 aaPredicted RBP20.95■□□□□ 0.94
TFAP2B-202ENST00000393655 GOLGA2Q08379 1002 aa20.95■□□□□ 0.94
TFAP2B-202ENST00000393655 CEP164Q9UPV0 1460 aa20.95■□□□□ 0.94
TFAP2B-202ENST00000393655 MS4A1P11836 297 aa20.95■□□□□ 0.94
TFAP2B-202ENST00000393655 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
TFAP2B-202ENST00000393655 TULP1O00294 542 aaPredicted RBP20.93■□□□□ 0.94
TFAP2B-202ENST00000393655 TRIM44Q96DX7 344 aaPredicted RBP20.92■□□□□ 0.94
TFAP2B-202ENST00000393655 MLECQ14165 292 aa20.9■□□□□ 0.94
TFAP2B-202ENST00000393655 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.93
TFAP2B-202ENST00000393655 MIER1Q8N108 512 aa20.89■□□□□ 0.93
TFAP2B-202ENST00000393655 EIF4G1Q04637 1599 aaKnown RBP20.87■□□□□ 0.93
TFAP2B-202ENST00000393655 TMF1P82094 1093 aa20.87■□□□□ 0.93
TFAP2B-202ENST00000393655 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
TFAP2B-202ENST00000393655 FGD1P98174 961 aa20.85■□□□□ 0.93
TFAP2B-202ENST00000393655 PTMAP06454 111 aaKnown RBP20.85■□□□□ 0.93
TFAP2B-202ENST00000393655 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
TFAP2B-202ENST00000393655 TNIKQ9UKE5 1360 aa20.84■□□□□ 0.93
TFAP2B-202ENST00000393655 SRPK2P78362 688 aaKnown RBP20.83■□□□□ 0.92
TFAP2B-202ENST00000393655 KCNJ4P48050 445 aa20.82■□□□□ 0.92
TFAP2B-202ENST00000393655 FRAT1Q92837 279 aaPredicted RBP20.82■□□□□ 0.92
TFAP2B-202ENST00000393655 CC2D1BQ5T0F9 858 aaKnown RBP20.81■□□□□ 0.92
TFAP2B-202ENST00000393655 GOLGA6L6A8MZA4 724 aa20.78■□□□□ 0.92
TFAP2B-202ENST00000393655 TPRNQ4KMQ1 711 aa20.76■□□□□ 0.91
TFAP2B-202ENST00000393655 DCAF11Q8TEB1 546 aa20.76■□□□□ 0.91
TFAP2B-202ENST00000393655 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
TFAP2B-202ENST00000393655 NAP1L2Q9ULW6 460 aaPredicted RBP20.76■□□□□ 0.91
TFAP2B-202ENST00000393655 TAOK2Q9UL54 1235 aa20.75■□□□□ 0.91
TFAP2B-202ENST00000393655 SOX12O15370 315 aa20.74■□□□□ 0.91
TFAP2B-202ENST00000393655 HDGFL2Q7Z4V5 671 aaPredicted RBP20.74■□□□□ 0.91
TFAP2B-202ENST00000393655 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
TFAP2B-202ENST00000393655 CARMIL2Q6F5E8 1435 aa20.74■□□□□ 0.91
TFAP2B-202ENST00000393655 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
TFAP2B-202ENST00000393655 SENP3-EIF4A1A0A087X0R7 540 aa20.72■□□□□ 0.91
TFAP2B-202ENST00000393655 GGT6Q6P531 493 aa20.71■□□□□ 0.91
TFAP2B-202ENST00000393655 BAZ1AQ9NRL2 1556 aaPredicted RBP20.71■□□□□ 0.91
TFAP2B-202ENST00000393655 HSP90AB1P08238 724 aaKnown RBP20.7■□□□□ 0.9
TFAP2B-202ENST00000393655 CUX2O14529 1486 aa20.7■□□□□ 0.9
TFAP2B-202ENST00000393655 DNTTIP2Q5QJE6 756 aaKnown RBP20.68■□□□□ 0.9
TFAP2B-202ENST00000393655 MCCP23508 829 aa20.68■□□□□ 0.9
TFAP2B-202ENST00000393655 CFAP44Q96MT7 982 aa20.68■□□□□ 0.9
TFAP2B-202ENST00000393655 NRDCO43847 1150 aa20.67■□□□□ 0.9
TFAP2B-202ENST00000393655 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
TFAP2B-202ENST00000393655 RGS3P49796 1198 aa20.67■□□□□ 0.9
TFAP2B-202ENST00000393655 TMX4Q9H1E5 349 aaPredicted RBP20.67■□□□□ 0.9
TFAP2B-202ENST00000393655 SAFB2Q14151 953 aaKnown RBP eCLIP20.66■□□□□ 0.9
TFAP2B-202ENST00000393655 SUPT16HQ9Y5B9 1047 aaKnown RBP20.66■□□□□ 0.9
TFAP2B-202ENST00000393655 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
TFAP2B-202ENST00000393655 ISY1Q9ULR0 285 aaKnown RBP20.65■□□□□ 0.9
TFAP2B-202ENST00000393655 PAK3O75914 559 aaPredicted RBP20.64■□□□□ 0.9
TFAP2B-202ENST00000393655 STK26Q9P289 416 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms