RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 ZNF608Q9ULD9 1512 aaPredicted RBP34.27■■■■□ 3.08
HMGA2-203ENST00000393578 FHAD1B1AJZ9 1412 aa34.25■■■■□ 3.07
HMGA2-203ENST00000393578 TTBK1Q5TCY1 1321 aaPredicted RBP34.25■■■■□ 3.07
HMGA2-203ENST00000393578 ADAMTS12P58397 1594 aa34.21■■■■□ 3.07
HMGA2-203ENST00000393578 EFCAB5A4FU69 1503 aa34.2■■■■□ 3.07
HMGA2-203ENST00000393578 EIF4G3O43432 1585 aaKnown RBP34.18■■■■□ 3.06
HMGA2-203ENST00000393578 SNAPC4Q5SXM2 1469 aa34.02■■■■□ 3.04
HMGA2-203ENST00000393578 SAMD9Q5K651 1589 aa34■■■■□ 3.03
HMGA2-203ENST00000393578 FHOD3Q2V2M9 1422 aa34■■■■□ 3.03
HMGA2-203ENST00000393578 P3H3Q8IVL6 736 aa34■■■■□ 3.03
HMGA2-203ENST00000393578 MAP3K1Q13233 1512 aa33.98■■■■□ 3.03
HMGA2-203ENST00000393578 MAGI1Q96QZ7 1491 aaPredicted RBP33.97■■■■□ 3.03
HMGA2-203ENST00000393578 KANK4Q5T7N3 995 aaPredicted RBP33.94■■■■□ 3.02
HMGA2-203ENST00000393578 IQGAP2Q13576 1575 aa33.93■■■■□ 3.02
HMGA2-203ENST00000393578 PCF11O94913 1555 aaKnown RBP33.91■■■■□ 3.02
HMGA2-203ENST00000393578 FMN1Q68DA7 1419 aa33.91■■■■□ 3.02
HMGA2-203ENST00000393578 TIAM1Q13009 1591 aa33.89■■■■□ 3.02
HMGA2-203ENST00000393578 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
HMGA2-203ENST00000393578 FYCO1Q9BQS8 1478 aa33.88■■■■□ 3.01
HMGA2-203ENST00000393578 CASKIN1Q8WXD9 1431 aa33.87■■■■□ 3.01
HMGA2-203ENST00000393578 SYNJ2O15056 1496 aa33.84■■■■□ 3.01
HMGA2-203ENST00000393578 KIAA0586Q9BVV6 1533 aa33.81■■■■□ 3
HMGA2-203ENST00000393578 CFAP43Q8NDM7 1665 aa33.78■■■■□ 3
HMGA2-203ENST00000393578 UGGT2Q9NYU1 1516 aa33.77■■■■□ 3
HMGA2-203ENST00000393578 CHMP7Q8WUX9 453 aaPredicted RBP33.76■■■■□ 3
HMGA2-203ENST00000393578 LRRC9Q6ZRR7 1453 aa33.74■■■□□ 2.99
HMGA2-203ENST00000393578 ZEB1P37275 1124 aaPredicted RBP33.74■■■□□ 2.99
HMGA2-203ENST00000393578 ATP1B4Q9UN42 357 aaPredicted RBP33.7■■■□□ 2.99
HMGA2-203ENST00000393578 RRBP1Q9P2E9 1410 aaKnown RBP33.66■■■□□ 2.98
HMGA2-203ENST00000393578 CEP170Q5SW79 1584 aa33.65■■■□□ 2.98
HMGA2-203ENST00000393578 NUP160Q12769 1436 aa33.62■■■□□ 2.97
HMGA2-203ENST00000393578 FBLN2P98095 1184 aa33.62■■■□□ 2.97
HMGA2-203ENST00000393578 HNRNPUL2Q1KMD3 747 aaKnown RBP33.58■■■□□ 2.97
HMGA2-203ENST00000393578 DISP1Q96F81 1524 aa33.57■■■□□ 2.96
HMGA2-203ENST00000393578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.57■■■□□ 2.96
HMGA2-203ENST00000393578 KIAA0556O60303 1618 aa33.57■■■□□ 2.96
HMGA2-203ENST00000393578 CCNB3Q8WWL7 1395 aa33.53■■■□□ 2.96
HMGA2-203ENST00000393578 LRRIQ1Q96JM4 1722 aa33.52■■■□□ 2.96
HMGA2-203ENST00000393578 CCER1Q8TC90 406 aaPredicted RBP33.52■■■□□ 2.96
HMGA2-203ENST00000393578 HECW1Q76N89 1606 aa33.49■■■□□ 2.95
HMGA2-203ENST00000393578 CCDC18Q5T9S5 1454 aa33.48■■■□□ 2.95
HMGA2-203ENST00000393578 PHLDB1Q86UU1 1377 aa33.46■■■□□ 2.95
HMGA2-203ENST00000393578 CHD1O14646 1710 aa33.43■■■□□ 2.94
HMGA2-203ENST00000393578 MTUS2Q5JR59 1369 aa33.42■■■□□ 2.94
HMGA2-203ENST00000393578 JPH4Q96JJ6 628 aa33.4■■■□□ 2.94
HMGA2-203ENST00000393578 CARMIL2Q6F5E8 1435 aa33.38■■■□□ 2.93
HMGA2-203ENST00000393578 EPRSP07814 1512 aaKnown RBP33.37■■■□□ 2.93
HMGA2-203ENST00000393578 EHBP1L1Q8N3D4 1523 aa33.35■■■□□ 2.93
HMGA2-203ENST00000393578 RAPGEF6Q8TEU7 1601 aa33.28■■■□□ 2.92
HMGA2-203ENST00000393578 SUPT6HQ7KZ85 1726 aaKnown RBP33.27■■■□□ 2.92
HMGA2-203ENST00000393578 MAGI3Q5TCQ9 1506 aa33.26■■■□□ 2.91
HMGA2-203ENST00000393578 NCOA2Q15596 1464 aa33.25■■■□□ 2.91
HMGA2-203ENST00000393578 CDK13Q14004 1512 aaKnown RBP33.24■■■□□ 2.91
HMGA2-203ENST00000393578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.24■■■□□ 2.91
HMGA2-203ENST00000393578 NUP153P49790 1475 aaKnown RBP33.23■■■□□ 2.91
HMGA2-203ENST00000393578 FGD6Q6ZV73 1430 aa33.2■■■□□ 2.9
HMGA2-203ENST00000393578 ARHGEF11O15085 1522 aa33.19■■■□□ 2.9
HMGA2-203ENST00000393578 FAM50AQ14320 339 aaKnown RBP33.18■■■□□ 2.9
HMGA2-203ENST00000393578 ITGAEP38570 1179 aa33.16■■■□□ 2.9
HMGA2-203ENST00000393578 MYOM3Q5VTT5 1437 aa33.16■■■□□ 2.9
HMGA2-203ENST00000393578 PRG4Q92954 1404 aaPredicted RBP33.14■■■□□ 2.9
HMGA2-203ENST00000393578 PLB1Q6P1J6 1458 aa33.14■■■□□ 2.9
HMGA2-203ENST00000393578 SHROOM2Q13796 1616 aa33.11■■■□□ 2.89
HMGA2-203ENST00000393578 ARID3CA6NKF2 412 aa33.1■■■□□ 2.89
HMGA2-203ENST00000393578 CDK11AQ9UQ88 783 aaPredicted RBP33.07■■■□□ 2.88
HMGA2-203ENST00000393578 ABCA8O94911 1581 aa33.05■■■□□ 2.88
HMGA2-203ENST00000393578 CLASP1Q7Z460 1538 aa33.01■■■□□ 2.87
HMGA2-203ENST00000393578 PTPRGP23470 1445 aa32.99■■■□□ 2.87
HMGA2-203ENST00000393578 PTPN23Q9H3S7 1636 aa32.97■■■□□ 2.87
HMGA2-203ENST00000393578 SETD5Q9C0A6 1442 aa32.97■■■□□ 2.87
HMGA2-203ENST00000393578 DHX57Q6P158 1386 aaKnown RBP32.97■■■□□ 2.87
HMGA2-203ENST00000393578 CLSPNQ9HAW4 1339 aa32.96■■■□□ 2.87
HMGA2-203ENST00000393578 MIA2Q96PC5 1412 aa32.95■■■□□ 2.87
HMGA2-203ENST00000393578 RAB3GAP2Q9H2M9 1393 aa32.94■■■□□ 2.86
HMGA2-203ENST00000393578 TROQ12816 1431 aaPredicted RBP32.94■■■□□ 2.86
HMGA2-203ENST00000393578 TCOF1Q13428 1488 aaKnown RBP32.94■■■□□ 2.86
HMGA2-203ENST00000393578 ATP10BO94823 1461 aa32.87■■■□□ 2.85
HMGA2-203ENST00000393578 ERCC6L2Q5T890 1561 aa32.87■■■□□ 2.85
HMGA2-203ENST00000393578 ADCY10Q96PN6 1610 aa32.85■■■□□ 2.85
HMGA2-203ENST00000393578 PTPRKQ15262 1439 aa32.83■■■□□ 2.85
HMGA2-203ENST00000393578 UACAQ9BZF9 1416 aa32.81■■■□□ 2.84
HMGA2-203ENST00000393578 PLEKHD1A6NEE1 506 aa32.79■■■□□ 2.84
HMGA2-203ENST00000393578 HFM1A2PYH4 1435 aa32.76■■■□□ 2.84
HMGA2-203ENST00000393578 KIF14Q15058 1648 aa32.75■■■□□ 2.83
HMGA2-203ENST00000393578 ITSN2Q9NZM3 1697 aa32.72■■■□□ 2.83
HMGA2-203ENST00000393578 ABCC2Q92887 1545 aa32.69■■■□□ 2.82
HMGA2-203ENST00000393578 GPATCH8Q9UKJ3 1502 aaKnown RBP32.69■■■□□ 2.82
HMGA2-203ENST00000393578 NAIPQ13075 1403 aa32.66■■■□□ 2.82
HMGA2-203ENST00000393578 AKNAQ7Z591 1439 aa32.64■■■□□ 2.82
HMGA2-203ENST00000393578 ABCC10Q5T3U5 1492 aa32.63■■■□□ 2.81
HMGA2-203ENST00000393578 CFDP1Q9UEE9 299 aaPredicted RBP32.63■■■□□ 2.81
HMGA2-203ENST00000393578 MAPKBP1O60336 1514 aa32.61■■■□□ 2.81
HMGA2-203ENST00000393578 DNMT1P26358 1616 aaKnown RBP32.6■■■□□ 2.81
HMGA2-203ENST00000393578 DAPK1P53355 1430 aa32.59■■■□□ 2.81
HMGA2-203ENST00000393578 UHRF1BP1LA0JNW5 1464 aa32.59■■■□□ 2.81
HMGA2-203ENST00000393578 ZNF644Q9H582 1327 aaPredicted RBP32.58■■■□□ 2.81
HMGA2-203ENST00000393578 CAMSAP2Q08AD1 1489 aa32.57■■■□□ 2.8
HMGA2-203ENST00000393578 GCC2Q8IWJ2 1684 aa32.56■■■□□ 2.8
HMGA2-203ENST00000393578 CDC42BPAQ5VT25 1732 aa32.56■■■□□ 2.8
HMGA2-203ENST00000393578 CHIC2Q9UKJ5 165 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms