RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 CLIP1P30622 1438 aa20.23■□□□□ 0.83
PTGFRN-201ENST00000393203 MTUS2Q5JR59 1369 aa20.19■□□□□ 0.82
PTGFRN-201ENST00000393203 DDRGK1Q96HY6 314 aa20.17■□□□□ 0.82
PTGFRN-201ENST00000393203 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
PTGFRN-201ENST00000393203 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
PTGFRN-201ENST00000393203 TPRNQ4KMQ1 711 aa20.14■□□□□ 0.81
PTGFRN-201ENST00000393203 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
PTGFRN-201ENST00000393203 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
PTGFRN-201ENST00000393203 SIN3AQ96ST3 1273 aa20.12■□□□□ 0.81
PTGFRN-201ENST00000393203 BECN1Q14457 450 aa20.12■□□□□ 0.81
PTGFRN-201ENST00000393203 ESF1Q9H501 851 aaKnown RBP20.11■□□□□ 0.81
PTGFRN-201ENST00000393203 NCLP19338 710 aaKnown RBP20.11■□□□□ 0.81
PTGFRN-201ENST00000393203 B4GALNT3Q6L9W6 998 aa20.1■□□□□ 0.81
PTGFRN-201ENST00000393203 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
PTGFRN-201ENST00000393203 TSPY4P0CV99 314 aa20.08■□□□□ 0.81
PTGFRN-201ENST00000393203 TSPY10P0CW01 314 aa20.08■□□□□ 0.81
PTGFRN-201ENST00000393203 MYH16Q9H6N6 1097 aa20.07■□□□□ 0.8
PTGFRN-201ENST00000393203 PLEKHG5O94827 1062 aa20.07■□□□□ 0.8
PTGFRN-201ENST00000393203 NOP58Q9Y2X3 529 aaKnown RBP20.06■□□□□ 0.8
PTGFRN-201ENST00000393203 RGS3P49796 1198 aa20.05■□□□□ 0.8
PTGFRN-201ENST00000393203 PPP4R2Q9NY27 417 aa20.03■□□□□ 0.8
PTGFRN-201ENST00000393203 NEUROD2Q15784 382 aa20.01■□□□□ 0.79
PTGFRN-201ENST00000393203 NAP1L5Q96NT1 182 aaPredicted RBP20■□□□□ 0.79
PTGFRN-201ENST00000393203 GOLGA3Q08378 1498 aa19.97■□□□□ 0.79
PTGFRN-201ENST00000393203 ZBTB7CA1YPR0 619 aa19.97■□□□□ 0.79
PTGFRN-201ENST00000393203 PPM1GO15355 546 aaPredicted RBP19.97■□□□□ 0.79
PTGFRN-201ENST00000393203 PTMAP06454 111 aaKnown RBP19.95■□□□□ 0.78
PTGFRN-201ENST00000393203 GOLGA6L22H0YM25 854 aa19.94■□□□□ 0.78
PTGFRN-201ENST00000393203 DEKP35659 375 aaKnown RBP19.94■□□□□ 0.78
PTGFRN-201ENST00000393203 RBM19Q9Y4C8 960 aaKnown RBP19.94■□□□□ 0.78
PTGFRN-201ENST00000393203 CARD11Q9BXL7 1154 aa19.93■□□□□ 0.78
PTGFRN-201ENST00000393203 DNTTIP2Q5QJE6 756 aaKnown RBP19.91■□□□□ 0.78
PTGFRN-201ENST00000393203 FRAT1Q92837 279 aaPredicted RBP19.91■□□□□ 0.78
PTGFRN-201ENST00000393203 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
PTGFRN-201ENST00000393203 FTSJ3Q8IY81 847 aaKnown RBP19.9■□□□□ 0.78
PTGFRN-201ENST00000393203 KNSTRNQ9Y448 316 aa19.89■□□□□ 0.77
PTGFRN-201ENST00000393203 ERICH6BQ5W0A0 696 aa19.88■□□□□ 0.77
PTGFRN-201ENST00000393203 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
PTGFRN-201ENST00000393203 TNNT2P45379 298 aaPredicted RBP19.87■□□□□ 0.77
PTGFRN-201ENST00000393203 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
PTGFRN-201ENST00000393203 SPRYD3Q8NCJ5 442 aa19.85■□□□□ 0.77
PTGFRN-201ENST00000393203 A0A0G2JS52 829 aa19.85■□□□□ 0.77
PTGFRN-201ENST00000393203 C14orf37Q86TY3 774 aa19.84■□□□□ 0.77
PTGFRN-201ENST00000393203 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
PTGFRN-201ENST00000393203 PLCB2Q00722 1185 aa19.83■□□□□ 0.77
PTGFRN-201ENST00000393203 CHMP7Q8WUX9 453 aaPredicted RBP19.81■□□□□ 0.76
PTGFRN-201ENST00000393203 ARID4BQ4LE39 1312 aaPredicted RBP19.81■□□□□ 0.76
PTGFRN-201ENST00000393203 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
PTGFRN-201ENST00000393203 TAOK2Q9UL54 1235 aa19.8■□□□□ 0.76
PTGFRN-201ENST00000393203 CFAP53Q96M91 514 aa19.78■□□□□ 0.76
PTGFRN-201ENST00000393203 HSP90AB1P08238 724 aaKnown RBP19.76■□□□□ 0.75
PTGFRN-201ENST00000393203 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
PTGFRN-201ENST00000393203 CASC1Q6TDU7 716 aa19.74■□□□□ 0.75
PTGFRN-201ENST00000393203 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
PTGFRN-201ENST00000393203 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
PTGFRN-201ENST00000393203 EEA1Q15075 1411 aa19.73■□□□□ 0.75
PTGFRN-201ENST00000393203 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.72■□□□□ 0.75
PTGFRN-201ENST00000393203 PPP1R15AO75807 674 aaPredicted RBP19.72■□□□□ 0.75
PTGFRN-201ENST00000393203 PLEKHD1A6NEE1 506 aa19.7■□□□□ 0.74
PTGFRN-201ENST00000393203 MAPK8IP3Q9UPT6 1336 aa19.69■□□□□ 0.74
PTGFRN-201ENST00000393203 ZRSR1Q15695 479 aaKnown RBP19.69■□□□□ 0.74
PTGFRN-201ENST00000393203 CDK11BP21127 795 aaKnown RBP19.68■□□□□ 0.74
PTGFRN-201ENST00000393203 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
PTGFRN-201ENST00000393203 U2SURPO15042 1029 aaKnown RBP19.66■□□□□ 0.74
PTGFRN-201ENST00000393203 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
PTGFRN-201ENST00000393203 CDCA8Q53HL2 280 aa19.66■□□□□ 0.74
PTGFRN-201ENST00000393203 CCNB3Q8WWL7 1395 aa19.66■□□□□ 0.74
PTGFRN-201ENST00000393203 FOXD1Q16676 465 aa19.64■□□□□ 0.73
PTGFRN-201ENST00000393203 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
PTGFRN-201ENST00000393203 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
PTGFRN-201ENST00000393203 AMER1Q5JTC6 1135 aaPredicted RBP19.62■□□□□ 0.73
PTGFRN-201ENST00000393203 ARID3AQ99856 593 aa19.62■□□□□ 0.73
PTGFRN-201ENST00000393203 GZF1Q9H116 711 aaPredicted RBP19.62■□□□□ 0.73
PTGFRN-201ENST00000393203 HSCBQ8IWL3 235 aa19.61■□□□□ 0.73
PTGFRN-201ENST00000393203 TULP1O00294 542 aaPredicted RBP19.61■□□□□ 0.73
PTGFRN-201ENST00000393203 SOGA1O94964 1423 aa19.6■□□□□ 0.73
PTGFRN-201ENST00000393203 SLKQ9H2G2 1235 aaPredicted RBP19.58■□□□□ 0.73
PTGFRN-201ENST00000393203 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
PTGFRN-201ENST00000393203 NUDCQ9Y266 331 aa19.57■□□□□ 0.72
PTGFRN-201ENST00000393203 KANK4Q5T7N3 995 aaPredicted RBP19.56■□□□□ 0.72
PTGFRN-201ENST00000393203 NAP1L2Q9ULW6 460 aaPredicted RBP19.55■□□□□ 0.72
PTGFRN-201ENST00000393203 MSNP26038 577 aaKnown RBP19.54■□□□□ 0.72
PTGFRN-201ENST00000393203 L1TD1Q5T7N2 865 aaKnown RBP19.53■□□□□ 0.72
PTGFRN-201ENST00000393203 OS9Q13438 667 aaPredicted RBP19.53■□□□□ 0.72
PTGFRN-201ENST00000393203 APBB1O00213 710 aa19.52■□□□□ 0.72
PTGFRN-201ENST00000393203 POGKQ9P215 609 aa19.52■□□□□ 0.72
PTGFRN-201ENST00000393203 TMF1P82094 1093 aa19.52■□□□□ 0.71
PTGFRN-201ENST00000393203 KCNJ4P48050 445 aa19.5■□□□□ 0.71
PTGFRN-201ENST00000393203 FGD1P98174 961 aa19.5■□□□□ 0.71
PTGFRN-201ENST00000393203 RCAN3Q9UKA8 241 aa19.5■□□□□ 0.71
PTGFRN-201ENST00000393203 SETD5Q9C0A6 1442 aa19.5■□□□□ 0.71
PTGFRN-201ENST00000393203 SOX12O15370 315 aa19.49■□□□□ 0.71
PTGFRN-201ENST00000393203 SAFB2Q14151 953 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTGFRN-201ENST00000393203 LMOD2Q6P5Q4 547 aa19.46■□□□□ 0.71
PTGFRN-201ENST00000393203 MS4A1P11836 297 aa19.44■□□□□ 0.7
PTGFRN-201ENST00000393203 IPO9Q96P70 1041 aaKnown RBP19.43■□□□□ 0.7
PTGFRN-201ENST00000393203 GOLGA6L4A6NEF3 574 aa19.43■□□□□ 0.7
PTGFRN-201ENST00000393203 MORC1Q86VD1 984 aa19.43■□□□□ 0.7
PTGFRN-201ENST00000393203 DRC7Q8IY82 874 aa19.43■□□□□ 0.7
PTGFRN-201ENST00000393203 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms