RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 ZMYND15Q9H091 742 aa2.68□□□□□ -1.98
RNU1-78P-201ENST00000391248 LMOD2Q6P5Q4 547 aa2.67□□□□□ -1.98
RNU1-78P-201ENST00000391248 SLC24A3Q9HC58 644 aa2.67□□□□□ -1.98
RNU1-78P-201ENST00000391248 STAG3Q9UJ98 1225 aa2.67□□□□□ -1.98
RNU1-78P-201ENST00000391248 ZC3H15Q8WU90 426 aaKnown RBP2.66□□□□□ -1.98
RNU1-78P-201ENST00000391248 TRIM41Q8WV44 630 aa2.66□□□□□ -1.98
RNU1-78P-201ENST00000391248 RNF25Q96BH1 459 aaPredicted RBP2.66□□□□□ -1.98
RNU1-78P-201ENST00000391248 IL27Q8NEV9 243 aa2.65□□□□□ -1.99
RNU1-78P-201ENST00000391248 LOC105371045A0A1W2PR82 267 aa2.64□□□□□ -1.99
RNU1-78P-201ENST00000391248 ZNF692Q9BU19 519 aaPredicted RBP2.64□□□□□ -1.99
RNU1-78P-201ENST00000391248 WDR70Q9NW82 654 aa2.64□□□□□ -1.99
RNU1-78P-201ENST00000391248 DCAF8Q5TAQ9 597 aa2.63□□□□□ -1.99
RNU1-78P-201ENST00000391248 CADPS2Q86UW7 1296 aa2.63□□□□□ -1.99
RNU1-78P-201ENST00000391248 RSPH6AQ9H0K4 717 aa2.63□□□□□ -1.99
RNU1-78P-201ENST00000391248 SPINK5Q9NQ38 1064 aaPredicted RBP2.63□□□□□ -1.99
RNU1-78P-201ENST00000391248 ARID3CA6NKF2 412 aa2.62□□□□□ -1.99
RNU1-78P-201ENST00000391248 STK25O00506 426 aa2.62□□□□□ -1.99
RNU1-78P-201ENST00000391248 KCNV2Q8TDN2 545 aa2.62□□□□□ -1.99
RNU1-78P-201ENST00000391248 C1orf115Q9H7X2 142 aa2.62□□□□□ -1.99
RNU1-78P-201ENST00000391248 APBB1O00213 710 aa2.61□□□□□ -1.99
RNU1-78P-201ENST00000391248 RIOK3O14730 519 aaKnown RBP2.61□□□□□ -1.99
RNU1-78P-201ENST00000391248 APLP2Q06481 763 aa2.61□□□□□ -1.99
RNU1-78P-201ENST00000391248 PABPN1Q86U42 306 aaKnown RBP eCLIP2.61□□□□□ -1.99
RNU1-78P-201ENST00000391248 NECTIN2Q92692 538 aa2.61□□□□□ -1.99
RNU1-78P-201ENST00000391248 SEMA3EO15041 775 aa2.6□□□□□ -1.99
RNU1-78P-201ENST00000391248 ZMYND10O75800 440 aa2.6□□□□□ -1.99
RNU1-78P-201ENST00000391248 PDIA4P13667 645 aaKnown RBP2.6□□□□□ -1.99
RNU1-78P-201ENST00000391248 GPBP1L1Q9HC44 474 aaPredicted RBP2.6□□□□□ -1.99
RNU1-78P-201ENST00000391248 STK24Q9Y6E0 443 aa2.6□□□□□ -1.99
RNU1-78P-201ENST00000391248 SHROOM4Q9ULL8 1493 aa2.59□□□□□ -1.99
RNU1-78P-201ENST00000391248 ZBTB7CA1YPR0 619 aa2.59□□□□□ -1.99
RNU1-78P-201ENST00000391248 ABCB7O75027 752 aa2.59□□□□□ -1.99
RNU1-78P-201ENST00000391248 GSE1Q14687 1217 aa2.59□□□□□ -1.99
RNU1-78P-201ENST00000391248 P3H3Q8IVL6 736 aa2.59□□□□□ -1.99
RNU1-78P-201ENST00000391248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.58□□□□□ -2
RNU1-78P-201ENST00000391248 CAPN15O75808 1086 aa2.58□□□□□ -2
RNU1-78P-201ENST00000391248 PLEKHG5O94827 1062 aa2.58□□□□□ -2
RNU1-78P-201ENST00000391248 NUBP1P53384 320 aa2.58□□□□□ -2
RNU1-78P-201ENST00000391248 KRI1Q8N9T8 703 aaKnown RBP2.58□□□□□ -2
RNU1-78P-201ENST00000391248 ZFP91Q96JP5 570 aaPredicted RBP2.58□□□□□ -2
RNU1-78P-201ENST00000391248 BCL11BQ9C0K0 894 aaPredicted RBP2.58□□□□□ -2
RNU1-78P-201ENST00000391248 TESPA1A2RU30 521 aaPredicted RBP2.57□□□□□ -2
RNU1-78P-201ENST00000391248 VGFO15240 615 aaPredicted RBP2.57□□□□□ -2
RNU1-78P-201ENST00000391248 MKRN3Q13064 507 aaKnown RBP2.57□□□□□ -2
RNU1-78P-201ENST00000391248 BARGINQ6ZT62 677 aa2.57□□□□□ -2
RNU1-78P-201ENST00000391248 ZBTB47Q9UFB7 747 aaPredicted RBP2.57□□□□□ -2
RNU1-78P-201ENST00000391248 CCDC9Q9Y3X0 531 aaKnown RBP2.57□□□□□ -2
RNU1-78P-201ENST00000391248 ARHGEF1Q92888 912 aaKnown RBP2.56□□□□□ -2
RNU1-78P-201ENST00000391248 AK7Q96M32 723 aa2.56□□□□□ -2
RNU1-78P-201ENST00000391248 KDM4CQ9H3R0 1056 aa2.56□□□□□ -2
RNU1-78P-201ENST00000391248 CHRM1P11229 460 aaPredicted RBP2.55□□□□□ -2
RNU1-78P-201ENST00000391248 E2F4Q16254 413 aa2.55□□□□□ -2
RNU1-78P-201ENST00000391248 SGIP1Q9BQI5 828 aa2.55□□□□□ -2
RNU1-78P-201ENST00000391248 SSUH2Q9Y2M2 353 aa2.55□□□□□ -2
RNU1-78P-201ENST00000391248 ZNF316A6NFI3 1004 aaPredicted RBP2.54□□□□□ -2
RNU1-78P-201ENST00000391248 TRIM66O15016 1216 aa2.54□□□□□ -2
RNU1-78P-201ENST00000391248 PPP1R37O75864 691 aa2.54□□□□□ -2
RNU1-78P-201ENST00000391248 PYGBP11216 843 aa2.54□□□□□ -2
RNU1-78P-201ENST00000391248 RBM26Q5T8P6 1007 aaKnown RBP2.54□□□□□ -2
RNU1-78P-201ENST00000391248 AEBP1Q8IUX7 1158 aa2.54□□□□□ -2
RNU1-78P-201ENST00000391248 OSCARQ8IYS5 282 aa2.54□□□□□ -2
RNU1-78P-201ENST00000391248 ZNF428Q96B54 188 aa2.54□□□□□ -2
RNU1-78P-201ENST00000391248 FAM117AQ9C073 453 aa2.54□□□□□ -2
RNU1-78P-201ENST00000391248 RYDENQ9NUL5 291 aaKnown RBP2.54□□□□□ -2
RNU1-78P-201ENST00000391248 ZNF777Q9ULD5 760 aaPredicted RBP2.54□□□□□ -2
RNU1-78P-201ENST00000391248 SPDYE2BA6NHP3 402 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 RAD21O60216 631 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 TRAK2O60296 914 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 IGSF3O75054 1194 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 SPDYE6P0CI01 402 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 PDE4DQ08499 809 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 SPDYE2Q495Y8 402 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 SMYD5Q6GMV2 418 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 CLUAP1Q96AJ1 413 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 MTMR7Q9Y216 660 aa2.53□□□□□ -2
RNU1-78P-201ENST00000391248 ZBTB12Q9Y330 459 aaPredicted RBP2.53□□□□□ -2
RNU1-78P-201ENST00000391248 FOXD4L5Q5VV16 416 aaPredicted RBP2.52□□□□□ -2.01
RNU1-78P-201ENST00000391248 CCDC82Q8N4S0 544 aa2.52□□□□□ -2.01
RNU1-78P-201ENST00000391248 KCTD17Q8N5Z5 321 aa2.52□□□□□ -2.01
RNU1-78P-201ENST00000391248 RGS22Q8NE09 1264 aa2.52□□□□□ -2.01
RNU1-78P-201ENST00000391248 FOXD4L4Q8WXT5 416 aaPredicted RBP2.52□□□□□ -2.01
RNU1-78P-201ENST00000391248 GZF1Q9H116 711 aaPredicted RBP2.52□□□□□ -2.01
RNU1-78P-201ENST00000391248 PLEKHG3A1L390 1219 aa2.51□□□□□ -2.01
RNU1-78P-201ENST00000391248 MLLT3P42568 568 aaPredicted RBP2.51□□□□□ -2.01
RNU1-78P-201ENST00000391248 RASEFQ8IZ41 740 aa2.5□□□□□ -2.01
RNU1-78P-201ENST00000391248 FAM212AQ96EL1 285 aa2.5□□□□□ -2.01
RNU1-78P-201ENST00000391248 LARP6Q9BRS8 491 aaKnown RBP2.5□□□□□ -2.01
RNU1-78P-201ENST00000391248 A6NJR5 290 aa2.49□□□□□ -2.01
RNU1-78P-201ENST00000391248 RBM25P49756 843 aaKnown RBP2.49□□□□□ -2.01
RNU1-78P-201ENST00000391248 FLIIQ13045 1269 aa2.49□□□□□ -2.01
RNU1-78P-201ENST00000391248 TRAIPQ9BWF2 469 aa2.49□□□□□ -2.01
RNU1-78P-201ENST00000391248 MFRPQ9BY79 579 aa2.49□□□□□ -2.01
RNU1-78P-201ENST00000391248 CREBZFQ9NS37 354 aa2.49□□□□□ -2.01
RNU1-78P-201ENST00000391248 PDE4AP27815 886 aa2.48□□□□□ -2.01
RNU1-78P-201ENST00000391248 MNX1P50219 401 aaPredicted RBP2.48□□□□□ -2.01
RNU1-78P-201ENST00000391248 IRF5Q13568 498 aa2.48□□□□□ -2.01
RNU1-78P-201ENST00000391248 GPIHBP1Q8IV16 184 aa2.48□□□□□ -2.01
RNU1-78P-201ENST00000391248 PELP1Q8IZL8 1130 aaKnown RBP2.48□□□□□ -2.01
RNU1-78P-201ENST00000391248 PCDHB8Q9UN66 801 aa2.48□□□□□ -2.01
RNU1-78P-201ENST00000391248 PCDHB13Q9Y5F0 798 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms