RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 SPDYE2Q495Y8 402 aa3.14□□□□□ -1.91
TRAJ39-201ENST00000390498 SSUH2Q9Y2M2 353 aa3.14□□□□□ -1.91
TRAJ39-201ENST00000390498 NKX1-1Q15270 411 aaPredicted RBP3.13□□□□□ -1.91
TRAJ39-201ENST00000390498 P3H3Q8IVL6 736 aa3.13□□□□□ -1.91
TRAJ39-201ENST00000390498 RYDENQ9NUL5 291 aaKnown RBP3.13□□□□□ -1.91
TRAJ39-201ENST00000390498 RIOK3O14730 519 aaKnown RBP3.12□□□□□ -1.91
TRAJ39-201ENST00000390498 PABPN1Q86U42 306 aaKnown RBP eCLIP3.12□□□□□ -1.91
TRAJ39-201ENST00000390498 RNF25Q96BH1 459 aaPredicted RBP3.12□□□□□ -1.91
TRAJ39-201ENST00000390498 VGFO15240 615 aaPredicted RBP3.1□□□□□ -1.91
TRAJ39-201ENST00000390498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.1□□□□□ -1.91
TRAJ39-201ENST00000390498 SGIP1Q9BQI5 828 aa3.1□□□□□ -1.91
TRAJ39-201ENST00000390498 STK25O00506 426 aa3.09□□□□□ -1.91
TRAJ39-201ENST00000390498 ABCB7O75027 752 aa3.09□□□□□ -1.91
TRAJ39-201ENST00000390498 LMOD2Q6P5Q4 547 aa3.09□□□□□ -1.91
TRAJ39-201ENST00000390498 NUBP1P53384 320 aa3.08□□□□□ -1.92
TRAJ39-201ENST00000390498 BRPF1P55201 1214 aaPredicted RBP3.08□□□□□ -1.92
TRAJ39-201ENST00000390498 C1QBPQ07021 282 aaKnown RBP3.08□□□□□ -1.92
TRAJ39-201ENST00000390498 OSCARQ8IYS5 282 aa3.08□□□□□ -1.92
TRAJ39-201ENST00000390498 RNF39Q9H2S5 420 aa3.08□□□□□ -1.92
TRAJ39-201ENST00000390498 CHRM1P11229 460 aaPredicted RBP3.07□□□□□ -1.92
TRAJ39-201ENST00000390498 DCAF8Q5TAQ9 597 aa3.07□□□□□ -1.92
TRAJ39-201ENST00000390498 WDR70Q9NW82 654 aa3.07□□□□□ -1.92
TRAJ39-201ENST00000390498 SUPT5HO00267 1087 aaKnown RBP3.06□□□□□ -1.92
TRAJ39-201ENST00000390498 RANGAP1P46060 587 aaPredicted RBP3.06□□□□□ -1.92
TRAJ39-201ENST00000390498 NEUROD2Q15784 382 aa3.05□□□□□ -1.92
TRAJ39-201ENST00000390498 KCNV2Q8TDN2 545 aa3.05□□□□□ -1.92
TRAJ39-201ENST00000390498 FAM212AQ96EL1 285 aa3.05□□□□□ -1.92
TRAJ39-201ENST00000390498 BCL11BQ9C0K0 894 aaPredicted RBP3.05□□□□□ -1.92
TRAJ39-201ENST00000390498 STK24Q9Y6E0 443 aa3.05□□□□□ -1.92
TRAJ39-201ENST00000390498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.04□□□□□ -1.92
TRAJ39-201ENST00000390498 ZC3H15Q8WU90 426 aaKnown RBP3.04□□□□□ -1.92
TRAJ39-201ENST00000390498 ZFP91Q96JP5 570 aaPredicted RBP3.04□□□□□ -1.92
TRAJ39-201ENST00000390498 PODXL2Q9NZ53 605 aa3.04□□□□□ -1.92
TRAJ39-201ENST00000390498 DSG3P32926 999 aa3.03□□□□□ -1.92
TRAJ39-201ENST00000390498 ARHGEF1Q92888 912 aaKnown RBP3.03□□□□□ -1.92
TRAJ39-201ENST00000390498 SLC24A3Q9HC58 644 aa3.02□□□□□ -1.93
TRAJ39-201ENST00000390498 TESPA1A2RU30 521 aaPredicted RBP3.01□□□□□ -1.93
TRAJ39-201ENST00000390498 CADPS2Q86UW7 1296 aa3.01□□□□□ -1.93
TRAJ39-201ENST00000390498 ZMYND10O75800 440 aa3□□□□□ -1.93
TRAJ39-201ENST00000390498 UBTFP17480 764 aaKnown RBP3□□□□□ -1.93
TRAJ39-201ENST00000390498 SMYD5Q6GMV2 418 aa3□□□□□ -1.93
TRAJ39-201ENST00000390498 ZMYND15Q9H091 742 aa3□□□□□ -1.93
TRAJ39-201ENST00000390498 E2F4Q16254 413 aa2.99□□□□□ -1.93
TRAJ39-201ENST00000390498 RSPH6AQ9H0K4 717 aa2.99□□□□□ -1.93
TRAJ39-201ENST00000390498 SEMA3EO15041 775 aa2.98□□□□□ -1.93
TRAJ39-201ENST00000390498 PYGBP11216 843 aa2.98□□□□□ -1.93
TRAJ39-201ENST00000390498 MNX1P50219 401 aaPredicted RBP2.98□□□□□ -1.93
TRAJ39-201ENST00000390498 TRIM26Q12899 539 aaPredicted RBP2.98□□□□□ -1.93
TRAJ39-201ENST00000390498 RASEFQ8IZ41 740 aa2.98□□□□□ -1.93
TRAJ39-201ENST00000390498 CREBZFQ9NS37 354 aa2.98□□□□□ -1.93
TRAJ39-201ENST00000390498 BARGINQ6ZT62 677 aa2.97□□□□□ -1.93
TRAJ39-201ENST00000390498 ZNF467Q7Z7K2 595 aaPredicted RBP2.97□□□□□ -1.93
TRAJ39-201ENST00000390498 SPDYE1Q8NFV5 336 aaPredicted RBP2.97□□□□□ -1.93
TRAJ39-201ENST00000390498 AK7Q96M32 723 aa2.97□□□□□ -1.93
TRAJ39-201ENST00000390498 PDAP1Q13442 181 aaKnown RBP2.96□□□□□ -1.94
TRAJ39-201ENST00000390498 NPM2Q86SE8 214 aaKnown RBP2.96□□□□□ -1.94
TRAJ39-201ENST00000390498 PRR29P0C7W0 189 aa2.95□□□□□ -1.94
TRAJ39-201ENST00000390498 HRCP23327 699 aa2.95□□□□□ -1.94
TRAJ39-201ENST00000390498 MFRPQ9BY79 579 aa2.95□□□□□ -1.94
TRAJ39-201ENST00000390498 ARIH1Q9Y4X5 557 aaPredicted RBP2.95□□□□□ -1.94
TRAJ39-201ENST00000390498 IL27Q8NEV9 243 aa2.94□□□□□ -1.94
TRAJ39-201ENST00000390498 PDE4AP27815 886 aa2.93□□□□□ -1.94
TRAJ39-201ENST00000390498 NLRP6P59044 892 aa2.93□□□□□ -1.94
TRAJ39-201ENST00000390498 KRI1Q8N9T8 703 aaKnown RBP2.93□□□□□ -1.94
TRAJ39-201ENST00000390498 KDM4CQ9H3R0 1056 aa2.93□□□□□ -1.94
TRAJ39-201ENST00000390498 GPBP1L1Q9HC44 474 aaPredicted RBP2.93□□□□□ -1.94
TRAJ39-201ENST00000390498 SOX12O15370 315 aa2.92□□□□□ -1.94
TRAJ39-201ENST00000390498 PPP1R37O75864 691 aa2.92□□□□□ -1.94
TRAJ39-201ENST00000390498 PSEN1P49768 467 aa2.92□□□□□ -1.94
TRAJ39-201ENST00000390498 MFSD10Q14728 455 aa2.92□□□□□ -1.94
TRAJ39-201ENST00000390498 GPIHBP1Q8IV16 184 aa2.92□□□□□ -1.94
TRAJ39-201ENST00000390498 FBXO22Q8NEZ5 403 aa2.92□□□□□ -1.94
TRAJ39-201ENST00000390498 AKT1S1Q96B36 256 aa2.92□□□□□ -1.94
TRAJ39-201ENST00000390498 CLEC11AQ9Y240 323 aa2.92□□□□□ -1.94
TRAJ39-201ENST00000390498 ZBTB7CA1YPR0 619 aa2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 TRIM66O15016 1216 aa2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 PDIA4P13667 645 aaKnown RBP2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 PDE4DQ08499 809 aa2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 FLIIQ13045 1269 aa2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 ZNF579Q8NAF0 562 aaKnown RBP2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 ARID3AQ99856 593 aa2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 LARP6Q9BRS8 491 aaKnown RBP2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 C1orf115Q9H7X2 142 aa2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 CCDC9Q9Y3X0 531 aaKnown RBP2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 NCKAP5LQ9HCH0 1330 aa2.91□□□□□ -1.94
TRAJ39-201ENST00000390498 APBB1O00213 710 aa2.9□□□□□ -1.95
TRAJ39-201ENST00000390498 MKRN3Q13064 507 aaKnown RBP2.9□□□□□ -1.95
TRAJ39-201ENST00000390498 CAMK2BQ13554 666 aa2.9□□□□□ -1.95
TRAJ39-201ENST00000390498 RBM42Q9BTD8 480 aaKnown RBP2.9□□□□□ -1.95
TRAJ39-201ENST00000390498 PCDHB8Q9UN66 801 aa2.9□□□□□ -1.95
TRAJ39-201ENST00000390498 PCDHB13Q9Y5F0 798 aa2.9□□□□□ -1.95
TRAJ39-201ENST00000390498 ZNF316A6NFI3 1004 aaPredicted RBP2.89□□□□□ -1.95
TRAJ39-201ENST00000390498 RBM26Q5T8P6 1007 aaKnown RBP2.89□□□□□ -1.95
TRAJ39-201ENST00000390498 EFCAB3Q8N7B9 438 aa2.89□□□□□ -1.95
TRAJ39-201ENST00000390498 DDX27Q96GQ7 796 aaKnown RBP2.89□□□□□ -1.95
TRAJ39-201ENST00000390498 DDRGK1Q96HY6 314 aa2.89□□□□□ -1.95
TRAJ39-201ENST00000390498 CRISPLD2Q9H0B8 497 aa2.89□□□□□ -1.95
TRAJ39-201ENST00000390498 TSPYL2Q9H2G4 693 aaPredicted RBP2.89□□□□□ -1.95
TRAJ39-201ENST00000390498 A6NJR5 290 aa2.88□□□□□ -1.95
TRAJ39-201ENST00000390498 MLLT3P42568 568 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms