RNA–Protein interactions for RNA: ENST00000390431.3

TRAV9-1-201, Transcript of T cell receptor alpha variable 9-1, humanhuman

APPRIS P1 BASIC

Gene TRAV9-1, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1-201ENST00000390431 BICRAQ9NZM4 1560 aa11.24□□□□□ -0.61
TRAV9-1-201ENST00000390431 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
TRAV9-1-201ENST00000390431 CLCN6P51797 869 aa11.21□□□□□ -0.61
TRAV9-1-201ENST00000390431 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
TRAV9-1-201ENST00000390431 MIER1Q8N108 512 aa11.18□□□□□ -0.62
TRAV9-1-201ENST00000390431 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
TRAV9-1-201ENST00000390431 SHROOM4Q9ULL8 1493 aa11.14□□□□□ -0.63
TRAV9-1-201ENST00000390431 LHX8Q68G74 356 aa11.14□□□□□ -0.63
TRAV9-1-201ENST00000390431 PLEKHG5O94827 1062 aa11.13□□□□□ -0.63
TRAV9-1-201ENST00000390431 PLCD3Q8N3E9 789 aa11.12□□□□□ -0.63
TRAV9-1-201ENST00000390431 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
TRAV9-1-201ENST00000390431 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
TRAV9-1-201ENST00000390431 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
TRAV9-1-201ENST00000390431 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
TRAV9-1-201ENST00000390431 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
TRAV9-1-201ENST00000390431 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
TRAV9-1-201ENST00000390431 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
TRAV9-1-201ENST00000390431 MAP3K13O43283 966 aa10.94□□□□□ -0.66
TRAV9-1-201ENST00000390431 NUBP1P53384 320 aa10.94□□□□□ -0.66
TRAV9-1-201ENST00000390431 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
TRAV9-1-201ENST00000390431 ATMINO43313 823 aaPredicted RBP10.93□□□□□ -0.66
TRAV9-1-201ENST00000390431 CC2D2AQ9P2K1 1620 aa10.92□□□□□ -0.66
TRAV9-1-201ENST00000390431 ASTLQ6HA08 431 aaPredicted RBP10.92□□□□□ -0.66
TRAV9-1-201ENST00000390431 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
TRAV9-1-201ENST00000390431 TRPC6Q9Y210 931 aa10.92□□□□□ -0.66
TRAV9-1-201ENST00000390431 POTEB2H3BUK9 544 aa10.89□□□□□ -0.67
TRAV9-1-201ENST00000390431 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
TRAV9-1-201ENST00000390431 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
TRAV9-1-201ENST00000390431 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
TRAV9-1-201ENST00000390431 FAM212AQ96EL1 285 aa10.87□□□□□ -0.67
TRAV9-1-201ENST00000390431 BMP2KQ9NSY1 1161 aaPredicted RBP10.86□□□□□ -0.67
TRAV9-1-201ENST00000390431 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
TRAV9-1-201ENST00000390431 SLC39A7Q92504 469 aa10.84□□□□□ -0.67
TRAV9-1-201ENST00000390431 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
TRAV9-1-201ENST00000390431 C7P10643 843 aa10.81□□□□□ -0.68
TRAV9-1-201ENST00000390431 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
TRAV9-1-201ENST00000390431 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
TRAV9-1-201ENST00000390431 TIE1P35590 1138 aa10.8□□□□□ -0.68
TRAV9-1-201ENST00000390431 DCAF8Q5TAQ9 597 aa10.8□□□□□ -0.68
TRAV9-1-201ENST00000390431 TTLL13PA6NNM8 815 aa10.78□□□□□ -0.68
TRAV9-1-201ENST00000390431 IFNL1Q8IU54 200 aa10.78□□□□□ -0.68
TRAV9-1-201ENST00000390431 PYGBP11216 843 aa10.76□□□□□ -0.69
TRAV9-1-201ENST00000390431 SGIP1Q9BQI5 828 aa10.76□□□□□ -0.69
TRAV9-1-201ENST00000390431 POTEJP0CG39 1038 aa10.75□□□□□ -0.69
TRAV9-1-201ENST00000390431 TRIM35Q9UPQ4 493 aa10.73□□□□□ -0.69
TRAV9-1-201ENST00000390431 POTEFA5A3E0 1075 aa10.72□□□□□ -0.69
TRAV9-1-201ENST00000390431 TMEM106CQ9BVX2 250 aa10.7□□□□□ -0.7
TRAV9-1-201ENST00000390431 COLQQ9Y215 455 aaPredicted RBP10.69□□□□□ -0.7
TRAV9-1-201ENST00000390431 SEC24BO95487 1268 aa10.68□□□□□ -0.7
TRAV9-1-201ENST00000390431 PCDHB8Q9UN66 801 aa10.68□□□□□ -0.7
TRAV9-1-201ENST00000390431 GSE1Q14687 1217 aa10.65□□□□□ -0.7
TRAV9-1-201ENST00000390431 IFNLR1Q8IU57 520 aaPredicted RBP10.65□□□□□ -0.7
TRAV9-1-201ENST00000390431 NCAPD3P42695 1498 aa10.65□□□□□ -0.7
TRAV9-1-201ENST00000390431 MAMSTRQ6ZN01 415 aa10.64□□□□□ -0.71
TRAV9-1-201ENST00000390431 IER5LQ5T953 404 aa10.62□□□□□ -0.71
TRAV9-1-201ENST00000390431 SCUBE2Q9NQ36 999 aa10.62□□□□□ -0.71
TRAV9-1-201ENST00000390431 SMARCA4P51532 1647 aa10.61□□□□□ -0.71
TRAV9-1-201ENST00000390431 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
TRAV9-1-201ENST00000390431 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
TRAV9-1-201ENST00000390431 SMARCA2P51531 1590 aa10.58□□□□□ -0.72
TRAV9-1-201ENST00000390431 BAZ1AQ9NRL2 1556 aaPredicted RBP10.58□□□□□ -0.72
TRAV9-1-201ENST00000390431 CIZ1Q9ULV3 898 aaPredicted RBP10.58□□□□□ -0.72
TRAV9-1-201ENST00000390431 HMGXB3Q12766 1538 aa10.57□□□□□ -0.72
TRAV9-1-201ENST00000390431 PLCG2P16885 1265 aa10.56□□□□□ -0.72
TRAV9-1-201ENST00000390431 ZNF467Q7Z7K2 595 aaPredicted RBP10.55□□□□□ -0.72
TRAV9-1-201ENST00000390431 PEG3Q9GZU2 1588 aa10.55□□□□□ -0.72
TRAV9-1-201ENST00000390431 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
TRAV9-1-201ENST00000390431 CHRM1P11229 460 aaPredicted RBP10.52□□□□□ -0.73
TRAV9-1-201ENST00000390431 POTEMA6NI47 508 aa10.5□□□□□ -0.73
TRAV9-1-201ENST00000390431 MROH2BQ7Z745 1585 aa10.5□□□□□ -0.73
TRAV9-1-201ENST00000390431 PSEN1P49768 467 aa10.49□□□□□ -0.73
TRAV9-1-201ENST00000390431 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
TRAV9-1-201ENST00000390431 POTEGQ6S5H5 508 aa10.48□□□□□ -0.73
TRAV9-1-201ENST00000390431 FAM163AQ96GL9 167 aaPredicted RBP10.48□□□□□ -0.73
TRAV9-1-201ENST00000390431 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
TRAV9-1-201ENST00000390431 OCEL1Q9H607 264 aa10.47□□□□□ -0.73
TRAV9-1-201ENST00000390431 LCE2DQ5TA82 110 aaPredicted RBP10.45□□□□□ -0.74
TRAV9-1-201ENST00000390431 SLAIN1Q8ND83 568 aa10.45□□□□□ -0.74
TRAV9-1-201ENST00000390431 MKRN3Q13064 507 aaKnown RBP10.43□□□□□ -0.74
TRAV9-1-201ENST00000390431 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
TRAV9-1-201ENST00000390431 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
TRAV9-1-201ENST00000390431 CUX2O14529 1486 aa10.42□□□□□ -0.74
TRAV9-1-201ENST00000390431 PDCD7Q8N8D1 485 aaKnown RBP10.4□□□□□ -0.74
TRAV9-1-201ENST00000390431 ERCC6Q03468 1493 aa10.4□□□□□ -0.74
TRAV9-1-201ENST00000390431 NESP48681 1621 aa10.4□□□□□ -0.75
TRAV9-1-201ENST00000390431 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
TRAV9-1-201ENST00000390431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.39□□□□□ -0.75
TRAV9-1-201ENST00000390431 LAMC3Q9Y6N6 1575 aa10.38□□□□□ -0.75
TRAV9-1-201ENST00000390431 WIZO95785 1651 aa10.35□□□□□ -0.75
TRAV9-1-201ENST00000390431 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.34□□□□□ -0.75
TRAV9-1-201ENST00000390431 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
TRAV9-1-201ENST00000390431 RSF1Q96T23 1441 aaPredicted RBP10.33□□□□□ -0.76
TRAV9-1-201ENST00000390431 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
TRAV9-1-201ENST00000390431 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
TRAV9-1-201ENST00000390431 C3orf67Q6ZVT6 689 aa10.31□□□□□ -0.76
TRAV9-1-201ENST00000390431 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
TRAV9-1-201ENST00000390431 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
TRAV9-1-201ENST00000390431 ST18O60284 1047 aa10.29□□□□□ -0.76
TRAV9-1-201ENST00000390431 RNF25Q96BH1 459 aaPredicted RBP10.29□□□□□ -0.76
TRAV9-1-201ENST00000390431 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms