RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 TSPY10P0CW01 314 aa20.01■□□□□ 0.79
PSME4-201ENST00000389993 WIZO95785 1651 aa20.01■□□□□ 0.79
PSME4-201ENST00000389993 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
PSME4-201ENST00000389993 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
PSME4-201ENST00000389993 BAZ1AQ9NRL2 1556 aaPredicted RBP19.98■□□□□ 0.79
PSME4-201ENST00000389993 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
PSME4-201ENST00000389993 EIF4G1Q04637 1599 aaKnown RBP19.96■□□□□ 0.79
PSME4-201ENST00000389993 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
PSME4-201ENST00000389993 RTL5Q5HYW3 569 aaPredicted RBP19.91■□□□□ 0.78
PSME4-201ENST00000389993 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
PSME4-201ENST00000389993 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
PSME4-201ENST00000389993 ZBTB7CA1YPR0 619 aa19.87■□□□□ 0.77
PSME4-201ENST00000389993 CUX2O14529 1486 aa19.87■□□□□ 0.77
PSME4-201ENST00000389993 NEFMP07197 916 aa19.86■□□□□ 0.77
PSME4-201ENST00000389993 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
PSME4-201ENST00000389993 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
PSME4-201ENST00000389993 CFDP1Q9UEE9 299 aaPredicted RBP19.85■□□□□ 0.77
PSME4-201ENST00000389993 ZBTB47Q9UFB7 747 aaPredicted RBP19.85■□□□□ 0.77
PSME4-201ENST00000389993 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
PSME4-201ENST00000389993 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.77
PSME4-201ENST00000389993 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
PSME4-201ENST00000389993 FOXD1Q16676 465 aa19.81■□□□□ 0.76
PSME4-201ENST00000389993 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
PSME4-201ENST00000389993 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
PSME4-201ENST00000389993 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
PSME4-201ENST00000389993 EEA1Q15075 1411 aa19.74■□□□□ 0.75
PSME4-201ENST00000389993 EIF4G2P78344 907 aaKnown RBP eCLIP19.73■□□□□ 0.756e-6■■■■□ 25.1
PSME4-201ENST00000389993 C14orf37Q86TY3 774 aa19.73■□□□□ 0.75
PSME4-201ENST00000389993 A0A0G2JS52 829 aa19.7■□□□□ 0.74
PSME4-201ENST00000389993 WDR43Q15061 677 aaKnown RBP eCLIP19.69■□□□□ 0.745e-7■□□□□ 9.9
PSME4-201ENST00000389993 TNNT2P45379 298 aaPredicted RBP19.68■□□□□ 0.74
PSME4-201ENST00000389993 MLECQ14165 292 aa19.68■□□□□ 0.74
PSME4-201ENST00000389993 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
PSME4-201ENST00000389993 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
PSME4-201ENST00000389993 PPM1GO15355 546 aaPredicted RBP19.66■□□□□ 0.74
PSME4-201ENST00000389993 CARD11Q9BXL7 1154 aa19.62■□□□□ 0.73
PSME4-201ENST00000389993 CCDC136Q96JN2 1154 aa19.6■□□□□ 0.73
PSME4-201ENST00000389993 NEUROD2Q15784 382 aa19.59■□□□□ 0.73
PSME4-201ENST00000389993 CC2D1BQ5T0F9 858 aaKnown RBP19.59■□□□□ 0.73
PSME4-201ENST00000389993 SAFB2Q14151 953 aaKnown RBP eCLIP19.58■□□□□ 0.72
PSME4-201ENST00000389993 CCNB3Q8WWL7 1395 aa19.57■□□□□ 0.72
PSME4-201ENST00000389993 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
PSME4-201ENST00000389993 ARXQ96QS3 562 aa19.54■□□□□ 0.72
PSME4-201ENST00000389993 NBR1Q14596 966 aa19.54■□□□□ 0.72
PSME4-201ENST00000389993 DCAF11Q8TEB1 546 aa19.54■□□□□ 0.72
PSME4-201ENST00000389993 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
PSME4-201ENST00000389993 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
PSME4-201ENST00000389993 SUPT16HQ9Y5B9 1047 aaKnown RBP19.51■□□□□ 0.71
PSME4-201ENST00000389993 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
PSME4-201ENST00000389993 SOX12O15370 315 aa19.49■□□□□ 0.71
PSME4-201ENST00000389993 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
PSME4-201ENST00000389993 FHOD3Q2V2M9 1422 aa19.48■□□□□ 0.71
PSME4-201ENST00000389993 GGT6Q6P531 493 aa19.46■□□□□ 0.71
PSME4-201ENST00000389993 LAS1LQ9Y4W2 734 aaKnown RBP19.46■□□□□ 0.71
PSME4-201ENST00000389993 NUTM2DQ5VT03 806 aaPredicted RBP19.45■□□□□ 0.7
PSME4-201ENST00000389993 LMOD2Q6P5Q4 547 aa19.45■□□□□ 0.7
PSME4-201ENST00000389993 SMARCA4P51532 1647 aa19.45■□□□□ 0.7
PSME4-201ENST00000389993 VPS8Q8N3P4 1428 aa19.43■□□□□ 0.7
PSME4-201ENST00000389993 HNRNPMP52272 730 aaKnown RBP eCLIP19.41■□□□□ 0.73e-13■■■□□ 17.2
PSME4-201ENST00000389993 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
PSME4-201ENST00000389993 STK26Q9P289 416 aa19.41■□□□□ 0.7
PSME4-201ENST00000389993 KNSTRNQ9Y448 316 aa19.41■□□□□ 0.7
PSME4-201ENST00000389993 FHAD1B1AJZ9 1412 aa19.4■□□□□ 0.7
PSME4-201ENST00000389993 HSP90AA1P07900 732 aaKnown RBP19.4■□□□□ 0.7
PSME4-201ENST00000389993 PKD2Q13563 968 aa19.39■□□□□ 0.69
PSME4-201ENST00000389993 ARHGAP35Q9NRY4 1499 aa19.39■□□□□ 0.69
PSME4-201ENST00000389993 POGKQ9P215 609 aa19.38■□□□□ 0.69
PSME4-201ENST00000389993 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
PSME4-201ENST00000389993 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
PSME4-201ENST00000389993 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
PSME4-201ENST00000389993 SETD5Q9C0A6 1442 aa19.34■□□□□ 0.69
PSME4-201ENST00000389993 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.69
PSME4-201ENST00000389993 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
PSME4-201ENST00000389993 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.29■□□□□ 0.68
PSME4-201ENST00000389993 HAP1P54257 671 aaPredicted RBP19.28■□□□□ 0.68
PSME4-201ENST00000389993 FRAT1Q92837 279 aaPredicted RBP19.28■□□□□ 0.68
PSME4-201ENST00000389993 MPHOSPH9Q99550 1183 aa19.28■□□□□ 0.68
PSME4-201ENST00000389993 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
PSME4-201ENST00000389993 TPRNQ4KMQ1 711 aa19.26■□□□□ 0.67
PSME4-201ENST00000389993 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
PSME4-201ENST00000389993 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
PSME4-201ENST00000389993 SRPK2P78362 688 aaKnown RBP19.24■□□□□ 0.67
PSME4-201ENST00000389993 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
PSME4-201ENST00000389993 NUP155O75694 1391 aa19.22■□□□□ 0.67
PSME4-201ENST00000389993 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
PSME4-201ENST00000389993 RGS3P49796 1198 aa19.18■□□□□ 0.66
PSME4-201ENST00000389993 KIF3BO15066 747 aa19.18■□□□□ 0.66
PSME4-201ENST00000389993 CFAP53Q96M91 514 aa19.17■□□□□ 0.66
PSME4-201ENST00000389993 CARMIL2Q6F5E8 1435 aa19.17■□□□□ 0.66
PSME4-201ENST00000389993 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
PSME4-201ENST00000389993 TAOK2Q9UL54 1235 aa19.16■□□□□ 0.66
PSME4-201ENST00000389993 TMF1P82094 1093 aa19.15■□□□□ 0.66
PSME4-201ENST00000389993 L3MBTL2Q969R5 705 aa19.14■□□□□ 0.65
PSME4-201ENST00000389993 FTSJ3Q8IY81 847 aaKnown RBP19.13■□□□□ 0.65
PSME4-201ENST00000389993 KANK1Q14678 1352 aa19.13■□□□□ 0.65
PSME4-201ENST00000389993 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
PSME4-201ENST00000389993 ROCK2O75116 1388 aaKnown RBP19.12■□□□□ 0.65
PSME4-201ENST00000389993 MAPK8IP3Q9UPT6 1336 aa19.12■□□□□ 0.65
PSME4-201ENST00000389993 MYH16Q9H6N6 1097 aa19.12■□□□□ 0.65
PSME4-201ENST00000389993 CDCA8Q53HL2 280 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms