RNA–Protein interactions for RNA: ENST00000389721.9

SPTB-203, Transcript of spectrin beta, erythrocytic, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTB, Length 6,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-203ENST00000389721 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
SPTB-203ENST00000389721 PPP1R15AO75807 674 aaPredicted RBP16.93■□□□□ 0.3
SPTB-203ENST00000389721 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
SPTB-203ENST00000389721 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
SPTB-203ENST00000389721 ARID4BQ4LE39 1312 aaPredicted RBP16.85■□□□□ 0.29
SPTB-203ENST00000389721 RGL3Q3MIN7 710 aa16.83■□□□□ 0.29
SPTB-203ENST00000389721 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
SPTB-203ENST00000389721 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
SPTB-203ENST00000389721 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.28
SPTB-203ENST00000389721 MIER1Q8N108 512 aa16.75■□□□□ 0.27
SPTB-203ENST00000389721 CLIP1P30622 1438 aa16.74■□□□□ 0.27
SPTB-203ENST00000389721 CDK11BP21127 795 aaKnown RBP16.74■□□□□ 0.27
SPTB-203ENST00000389721 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.272e-8■■■■■ 33.5
SPTB-203ENST00000389721 DCAF1Q9Y4B6 1507 aa16.73■□□□□ 0.27
SPTB-203ENST00000389721 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
SPTB-203ENST00000389721 LAS1LQ9Y4W2 734 aaKnown RBP16.72■□□□□ 0.27
SPTB-203ENST00000389721 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
SPTB-203ENST00000389721 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
SPTB-203ENST00000389721 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
SPTB-203ENST00000389721 TAOK2Q9UL54 1235 aa16.69■□□□□ 0.26
SPTB-203ENST00000389721 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
SPTB-203ENST00000389721 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
SPTB-203ENST00000389721 NCLP19338 710 aaKnown RBP16.64■□□□□ 0.25
SPTB-203ENST00000389721 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
SPTB-203ENST00000389721 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
SPTB-203ENST00000389721 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
SPTB-203ENST00000389721 CFDP1Q9UEE9 299 aaPredicted RBP16.61■□□□□ 0.25
SPTB-203ENST00000389721 FTSJ3Q8IY81 847 aaKnown RBP16.6■□□□□ 0.25
SPTB-203ENST00000389721 NPHP1O15259 732 aa16.6■□□□□ 0.25
SPTB-203ENST00000389721 CARD11Q9BXL7 1154 aa16.6■□□□□ 0.25
SPTB-203ENST00000389721 BECN1Q14457 450 aa16.58■□□□□ 0.25
SPTB-203ENST00000389721 POGKQ9P215 609 aa16.58■□□□□ 0.24
SPTB-203ENST00000389721 GOLGA3Q08378 1498 aa16.58■□□□□ 0.24
SPTB-203ENST00000389721 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
SPTB-203ENST00000389721 CC2D1BQ5T0F9 858 aaKnown RBP16.56■□□□□ 0.24
SPTB-203ENST00000389721 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
SPTB-203ENST00000389721 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
SPTB-203ENST00000389721 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
SPTB-203ENST00000389721 CASC1Q6TDU7 716 aa16.55■□□□□ 0.24
SPTB-203ENST00000389721 DDRGK1Q96HY6 314 aa16.55■□□□□ 0.24
SPTB-203ENST00000389721 SOX12O15370 315 aa16.52■□□□□ 0.24
SPTB-203ENST00000389721 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.24
SPTB-203ENST00000389721 MLECQ14165 292 aa16.52■□□□□ 0.24
SPTB-203ENST00000389721 GLIPR1L2Q4G1C9 344 aa16.51■□□□□ 0.23
SPTB-203ENST00000389721 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
SPTB-203ENST00000389721 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
SPTB-203ENST00000389721 TRIM44Q96DX7 344 aaPredicted RBP16.5■□□□□ 0.23
SPTB-203ENST00000389721 ZRSR1Q15695 479 aaKnown RBP16.5■□□□□ 0.23
SPTB-203ENST00000389721 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
SPTB-203ENST00000389721 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
SPTB-203ENST00000389721 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
SPTB-203ENST00000389721 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
SPTB-203ENST00000389721 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
SPTB-203ENST00000389721 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
SPTB-203ENST00000389721 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
SPTB-203ENST00000389721 SIN3AQ96ST3 1273 aa16.48■□□□□ 0.23
SPTB-203ENST00000389721 PTMAP06454 111 aaKnown RBP16.48■□□□□ 0.23
SPTB-203ENST00000389721 CCDC180Q9P1Z9 1646 aa16.47■□□□□ 0.23
SPTB-203ENST00000389721 RGS3P49796 1198 aa16.47■□□□□ 0.23
SPTB-203ENST00000389721 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.22
SPTB-203ENST00000389721 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
SPTB-203ENST00000389721 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
SPTB-203ENST00000389721 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
SPTB-203ENST00000389721 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
SPTB-203ENST00000389721 PLCB2Q00722 1185 aa16.41■□□□□ 0.22
SPTB-203ENST00000389721 DNTTIP2Q5QJE6 756 aaKnown RBP16.4■□□□□ 0.22
SPTB-203ENST00000389721 GOLGA2Q08379 1002 aa16.39■□□□□ 0.21
SPTB-203ENST00000389721 FGD1P98174 961 aa16.38■□□□□ 0.21
SPTB-203ENST00000389721 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
SPTB-203ENST00000389721 CCNB3Q8WWL7 1395 aa16.37■□□□□ 0.21
SPTB-203ENST00000389721 SRPK2P78362 688 aaKnown RBP16.37■□□□□ 0.21
SPTB-203ENST00000389721 KCNJ4P48050 445 aa16.36■□□□□ 0.21
SPTB-203ENST00000389721 HSP90AB1P08238 724 aaKnown RBP16.36■□□□□ 0.21
SPTB-203ENST00000389721 STK26Q9P289 416 aa16.34■□□□□ 0.21
SPTB-203ENST00000389721 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
SPTB-203ENST00000389721 EEA1Q15075 1411 aa16.33■□□□□ 0.21
SPTB-203ENST00000389721 KANK1Q14678 1352 aa16.33■□□□□ 0.2
SPTB-203ENST00000389721 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
SPTB-203ENST00000389721 SPRYD3Q8NCJ5 442 aa16.31■□□□□ 0.2
SPTB-203ENST00000389721 CLSTN1O94985 981 aa16.31■□□□□ 0.2
SPTB-203ENST00000389721 TMF1P82094 1093 aa16.31■□□□□ 0.2
SPTB-203ENST00000389721 ISY1Q9ULR0 285 aaKnown RBP16.3■□□□□ 0.2
SPTB-203ENST00000389721 ANP32EQ9BTT0 268 aa16.3■□□□□ 0.2
SPTB-203ENST00000389721 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
SPTB-203ENST00000389721 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
SPTB-203ENST00000389721 GGT6Q6P531 493 aa16.28■□□□□ 0.2
SPTB-203ENST00000389721 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
SPTB-203ENST00000389721 B4GALNT3Q6L9W6 998 aa16.28■□□□□ 0.2
SPTB-203ENST00000389721 APBB1O00213 710 aa16.27■□□□□ 0.2
SPTB-203ENST00000389721 PNNQ9H307 717 aaKnown RBP16.27■□□□□ 0.19
SPTB-203ENST00000389721 FOXD1Q16676 465 aa16.26■□□□□ 0.19
SPTB-203ENST00000389721 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
SPTB-203ENST00000389721 ZNF330Q9Y3S2 320 aaPredicted RBP16.26■□□□□ 0.19
SPTB-203ENST00000389721 PPP4R2Q9NY27 417 aa16.25■□□□□ 0.19
SPTB-203ENST00000389721 NAP1L5Q96NT1 182 aaPredicted RBP16.24■□□□□ 0.19
SPTB-203ENST00000389721 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
SPTB-203ENST00000389721 CUX2O14529 1486 aa16.22■□□□□ 0.19
SPTB-203ENST00000389721 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
SPTB-203ENST00000389721 GOLGA6L6A8MZA4 724 aa16.21■□□□□ 0.18
SPTB-203ENST00000389721 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms