RNA–Protein interactions for RNA: ENST00000389658.3

LAMA1-201, Transcript of laminin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA1, Length 9,657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-201ENST00000389658 CCDC180Q9P1Z9 1646 aa13.25□□□□□ -0.29
LAMA1-201ENST00000389658 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
LAMA1-201ENST00000389658 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
LAMA1-201ENST00000389658 ZBTB7CA1YPR0 619 aa13.24□□□□□ -0.29
LAMA1-201ENST00000389658 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
LAMA1-201ENST00000389658 GOLGA6L6A8MZA4 724 aa13.23□□□□□ -0.29
LAMA1-201ENST00000389658 TPRNQ4KMQ1 711 aa13.22□□□□□ -0.29
LAMA1-201ENST00000389658 NAP1L5Q96NT1 182 aaPredicted RBP13.22□□□□□ -0.29
LAMA1-201ENST00000389658 ERICH6BQ5W0A0 696 aa13.21□□□□□ -0.29
LAMA1-201ENST00000389658 C14orf37Q86TY3 774 aa13.21□□□□□ -0.29
LAMA1-201ENST00000389658 DCAF1Q9Y4B6 1507 aa13.2□□□□□ -0.3
LAMA1-201ENST00000389658 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
LAMA1-201ENST00000389658 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
LAMA1-201ENST00000389658 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
LAMA1-201ENST00000389658 NRDCO43847 1150 aa13.14□□□□□ -0.31
LAMA1-201ENST00000389658 PLCB2Q00722 1185 aa13.14□□□□□ -0.31
LAMA1-201ENST00000389658 PPM1GO15355 546 aaPredicted RBP13.14□□□□□ -0.31
LAMA1-201ENST00000389658 TSPY4P0CV99 314 aa13.14□□□□□ -0.31
LAMA1-201ENST00000389658 TSPY10P0CW01 314 aa13.14□□□□□ -0.31
LAMA1-201ENST00000389658 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
LAMA1-201ENST00000389658 CFAP53Q96M91 514 aa13.12□□□□□ -0.31
LAMA1-201ENST00000389658 CHAF1AQ13111 956 aaPredicted RBP13.12□□□□□ -0.31
LAMA1-201ENST00000389658 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
LAMA1-201ENST00000389658 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
LAMA1-201ENST00000389658 TAOK2Q9UL54 1235 aa13.09□□□□□ -0.31
LAMA1-201ENST00000389658 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
LAMA1-201ENST00000389658 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
LAMA1-201ENST00000389658 FGD1P98174 961 aa13.08□□□□□ -0.32
LAMA1-201ENST00000389658 MIER1Q8N108 512 aa13.08□□□□□ -0.32
LAMA1-201ENST00000389658 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
LAMA1-201ENST00000389658 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
LAMA1-201ENST00000389658 SENP3Q9H4L4 574 aaPredicted RBP13.07□□□□□ -0.32
LAMA1-201ENST00000389658 NPHP1O15259 732 aa13.06□□□□□ -0.32
LAMA1-201ENST00000389658 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
LAMA1-201ENST00000389658 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
LAMA1-201ENST00000389658 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
LAMA1-201ENST00000389658 CDCA8Q53HL2 280 aa13.04□□□□□ -0.32
LAMA1-201ENST00000389658 NAP1L2Q9ULW6 460 aaPredicted RBP13.04□□□□□ -0.32
LAMA1-201ENST00000389658 MSNP26038 577 aaKnown RBP13.04□□□□□ -0.32
LAMA1-201ENST00000389658 KCNJ4P48050 445 aa13.03□□□□□ -0.32
LAMA1-201ENST00000389658 OS9Q13438 667 aaPredicted RBP13.03□□□□□ -0.32
LAMA1-201ENST00000389658 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
LAMA1-201ENST00000389658 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
LAMA1-201ENST00000389658 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
LAMA1-201ENST00000389658 CLSTN1O94985 981 aa13.02□□□□□ -0.32
LAMA1-201ENST00000389658 GOLGA6L4A6NEF3 574 aa13.02□□□□□ -0.32
LAMA1-201ENST00000389658 NOP58Q9Y2X3 529 aaKnown RBP13.02□□□□□ -0.33
LAMA1-201ENST00000389658 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
LAMA1-201ENST00000389658 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
LAMA1-201ENST00000389658 DRC7Q8IY82 874 aa13□□□□□ -0.33
LAMA1-201ENST00000389658 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
LAMA1-201ENST00000389658 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
LAMA1-201ENST00000389658 RGS3P49796 1198 aa12.99□□□□□ -0.33
LAMA1-201ENST00000389658 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
LAMA1-201ENST00000389658 MS4A1P11836 297 aa12.97□□□□□ -0.33
LAMA1-201ENST00000389658 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
LAMA1-201ENST00000389658 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.33
LAMA1-201ENST00000389658 FRAT1Q92837 279 aaPredicted RBP12.96□□□□□ -0.33
LAMA1-201ENST00000389658 NUDCQ9Y266 331 aa12.96□□□□□ -0.33
LAMA1-201ENST00000389658 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
LAMA1-201ENST00000389658 MCCP23508 829 aa12.95□□□□□ -0.34
LAMA1-201ENST00000389658 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
LAMA1-201ENST00000389658 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
LAMA1-201ENST00000389658 PPP4R2Q9NY27 417 aa12.94□□□□□ -0.34
LAMA1-201ENST00000389658 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
LAMA1-201ENST00000389658 RSF1Q96T23 1441 aaPredicted RBP12.93□□□□□ -0.34
LAMA1-201ENST00000389658 NOC3LQ8WTT2 800 aaKnown RBP12.93□□□□□ -0.34
LAMA1-201ENST00000389658 GNL2Q13823 731 aaKnown RBP12.92□□□□□ -0.34
LAMA1-201ENST00000389658 CHMP7Q8WUX9 453 aaPredicted RBP12.91□□□□□ -0.34
LAMA1-201ENST00000389658 ARID4BQ4LE39 1312 aaPredicted RBP12.9□□□□□ -0.34
LAMA1-201ENST00000389658 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
LAMA1-201ENST00000389658 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
LAMA1-201ENST00000389658 CLIP1P30622 1438 aa12.89□□□□□ -0.35
LAMA1-201ENST00000389658 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
LAMA1-201ENST00000389658 ISY1Q9ULR0 285 aaKnown RBP12.87□□□□□ -0.35
LAMA1-201ENST00000389658 POGKQ9P215 609 aa12.87□□□□□ -0.35
LAMA1-201ENST00000389658 PTMSP20962 102 aa12.86□□□□□ -0.35
LAMA1-201ENST00000389658 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
LAMA1-201ENST00000389658 U2SURPO15042 1029 aaKnown RBP12.85□□□□□ -0.35
LAMA1-201ENST00000389658 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
LAMA1-201ENST00000389658 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
LAMA1-201ENST00000389658 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
LAMA1-201ENST00000389658 TNNT3P45378 269 aaPredicted RBP12.84□□□□□ -0.35
LAMA1-201ENST00000389658 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
LAMA1-201ENST00000389658 DEKP35659 375 aaKnown RBP12.82□□□□□ -0.36
LAMA1-201ENST00000389658 KIAA1211Q6ZU35 1233 aa12.82□□□□□ -0.36
LAMA1-201ENST00000389658 PRM3Q9NNZ6 103 aa12.82□□□□□ -0.36
LAMA1-201ENST00000389658 GOLGA6L1Q8N7Z2 621 aa12.81□□□□□ -0.36
LAMA1-201ENST00000389658 GBP4Q96PP9 640 aa12.81□□□□□ -0.36
LAMA1-201ENST00000389658 B4GALNT3Q6L9W6 998 aa12.81□□□□□ -0.36
LAMA1-201ENST00000389658 A0A0U1RQG5 324 aaPredicted RBP12.81□□□□□ -0.36
LAMA1-201ENST00000389658 TPM4P67936 248 aa12.8□□□□□ -0.36
LAMA1-201ENST00000389658 HTATSF1O43719 755 aaKnown RBP12.79□□□□□ -0.36
LAMA1-201ENST00000389658 SYAP1Q96A49 352 aaPredicted RBP12.79□□□□□ -0.36
LAMA1-201ENST00000389658 ARID3AQ99856 593 aa12.79□□□□□ -0.36
LAMA1-201ENST00000389658 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
LAMA1-201ENST00000389658 CFDP1Q9UEE9 299 aaPredicted RBP12.76□□□□□ -0.37
LAMA1-201ENST00000389658 USP35Q9P2H5 1018 aa12.76□□□□□ -0.37
LAMA1-201ENST00000389658 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
LAMA1-201ENST00000389658 TMF1P82094 1093 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms