RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
KCNQ3-201ENST00000388996 A0A0G2JS52 829 aa16.35■□□□□ 0.21
KCNQ3-201ENST00000388996 CEP162Q5TB80 1403 aa16.31■□□□□ 0.2
KCNQ3-201ENST00000388996 C14orf37Q86TY3 774 aa16.31■□□□□ 0.2
KCNQ3-201ENST00000388996 ERCC6Q03468 1493 aa16.3■□□□□ 0.2
KCNQ3-201ENST00000388996 RRP7BPQ9NSQ0 103 aa16.28■□□□□ 0.2
KCNQ3-201ENST00000388996 EIF5BO60841 1220 aaKnown RBP16.28■□□□□ 0.2
KCNQ3-201ENST00000388996 KIF27Q86VH2 1401 aa16.27■□□□□ 0.2
KCNQ3-201ENST00000388996 NBR1Q14596 966 aa16.25■□□□□ 0.19
KCNQ3-201ENST00000388996 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
KCNQ3-201ENST00000388996 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
KCNQ3-201ENST00000388996 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
KCNQ3-201ENST00000388996 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
KCNQ3-201ENST00000388996 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
KCNQ3-201ENST00000388996 ARXQ96QS3 562 aa16.23■□□□□ 0.19
KCNQ3-201ENST00000388996 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
KCNQ3-201ENST00000388996 CDK11BP21127 795 aaKnown RBP16.22■□□□□ 0.19
KCNQ3-201ENST00000388996 KCNH8Q96L42 1107 aa16.22■□□□□ 0.19
KCNQ3-201ENST00000388996 PLEKHD1A6NEE1 506 aa16.21■□□□□ 0.19
KCNQ3-201ENST00000388996 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
KCNQ3-201ENST00000388996 BECN1Q14457 450 aa16.2■□□□□ 0.18
KCNQ3-201ENST00000388996 PLEKHG5O94827 1062 aa16.19■□□□□ 0.18
KCNQ3-201ENST00000388996 ARID4BQ4LE39 1312 aaPredicted RBP16.19■□□□□ 0.18
KCNQ3-201ENST00000388996 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
KCNQ3-201ENST00000388996 CDCA8Q53HL2 280 aa16.17■□□□□ 0.18
KCNQ3-201ENST00000388996 GLIPR1L2Q4G1C9 344 aa16.17■□□□□ 0.18
KCNQ3-201ENST00000388996 IRX6P78412 446 aaPredicted RBP16.16■□□□□ 0.18
KCNQ3-201ENST00000388996 KNSTRNQ9Y448 316 aa16.15■□□□□ 0.18
KCNQ3-201ENST00000388996 MYO15BQ96JP2 1530 aa16.15■□□□□ 0.18
KCNQ3-201ENST00000388996 HIRIP3Q9BW71 556 aaPredicted RBP16.14■□□□□ 0.17
KCNQ3-201ENST00000388996 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
KCNQ3-201ENST00000388996 CFDP1Q9UEE9 299 aaPredicted RBP16.13■□□□□ 0.17
KCNQ3-201ENST00000388996 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
KCNQ3-201ENST00000388996 HAP1P54257 671 aaPredicted RBP16.12■□□□□ 0.17
KCNQ3-201ENST00000388996 KAT6BQ8WYB5 2073 aa16.12■□□□□ 0.17
KCNQ3-201ENST00000388996 CASC1Q6TDU7 716 aa16.11■□□□□ 0.17
KCNQ3-201ENST00000388996 MIER1Q8N108 512 aa16.11■□□□□ 0.17
KCNQ3-201ENST00000388996 NCLP19338 710 aaKnown RBP16.1■□□□□ 0.17
KCNQ3-201ENST00000388996 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
KCNQ3-201ENST00000388996 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.17
KCNQ3-201ENST00000388996 RGL3Q3MIN7 710 aa16.08■□□□□ 0.17
KCNQ3-201ENST00000388996 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
KCNQ3-201ENST00000388996 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
KCNQ3-201ENST00000388996 KANK1Q14678 1352 aa16.05■□□□□ 0.16
KCNQ3-201ENST00000388996 ANP32EQ9BTT0 268 aa16.04■□□□□ 0.16
KCNQ3-201ENST00000388996 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
KCNQ3-201ENST00000388996 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
KCNQ3-201ENST00000388996 MAPK8IP3Q9UPT6 1336 aa16.03■□□□□ 0.16
KCNQ3-201ENST00000388996 POGKQ9P215 609 aa16.01■□□□□ 0.15
KCNQ3-201ENST00000388996 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
KCNQ3-201ENST00000388996 GON4LQ3T8J9 2241 aa16■□□□□ 0.15
KCNQ3-201ENST00000388996 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
KCNQ3-201ENST00000388996 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
KCNQ3-201ENST00000388996 PTMAP06454 111 aaKnown RBP15.95■□□□□ 0.14
KCNQ3-201ENST00000388996 TRIM44Q96DX7 344 aaPredicted RBP15.95■□□□□ 0.14
KCNQ3-201ENST00000388996 LAS1LQ9Y4W2 734 aaKnown RBP15.95■□□□□ 0.14
KCNQ3-201ENST00000388996 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
KCNQ3-201ENST00000388996 CUX2O14529 1486 aa15.94■□□□□ 0.14
KCNQ3-201ENST00000388996 NPHP1O15259 732 aa15.94■□□□□ 0.14
KCNQ3-201ENST00000388996 CHMP4BQ9H444 224 aaKnown RBP15.94■□□□□ 0.14
KCNQ3-201ENST00000388996 LMOD2Q6P5Q4 547 aa15.94■□□□□ 0.14
KCNQ3-201ENST00000388996 TNNT2P45379 298 aaPredicted RBP15.91■□□□□ 0.14
KCNQ3-201ENST00000388996 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
KCNQ3-201ENST00000388996 OS9Q13438 667 aaPredicted RBP15.91■□□□□ 0.14
KCNQ3-201ENST00000388996 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
KCNQ3-201ENST00000388996 NEUROD2Q15784 382 aa15.9■□□□□ 0.14
KCNQ3-201ENST00000388996 MS4A1P11836 297 aa15.88■□□□□ 0.13
KCNQ3-201ENST00000388996 PNNQ9H307 717 aaKnown RBP15.88■□□□□ 0.13
KCNQ3-201ENST00000388996 FGD1P98174 961 aa15.87■□□□□ 0.13
KCNQ3-201ENST00000388996 WIZO95785 1651 aa15.86■□□□□ 0.13
KCNQ3-201ENST00000388996 TPRNQ4KMQ1 711 aa15.86■□□□□ 0.13
KCNQ3-201ENST00000388996 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
KCNQ3-201ENST00000388996 CC2D1BQ5T0F9 858 aaKnown RBP15.85■□□□□ 0.13
KCNQ3-201ENST00000388996 RGS3P49796 1198 aa15.85■□□□□ 0.13
KCNQ3-201ENST00000388996 FRAT1Q92837 279 aaPredicted RBP15.84■□□□□ 0.13
KCNQ3-201ENST00000388996 U2SURPO15042 1029 aaKnown RBP15.83■□□□□ 0.13
KCNQ3-201ENST00000388996 GOLGA2Q08379 1002 aa15.83■□□□□ 0.13
KCNQ3-201ENST00000388996 KCNJ4P48050 445 aa15.83■□□□□ 0.12
KCNQ3-201ENST00000388996 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.12
KCNQ3-201ENST00000388996 GOLGA6L6A8MZA4 724 aa15.83■□□□□ 0.12
KCNQ3-201ENST00000388996 TMF1P82094 1093 aa15.81■□□□□ 0.12
KCNQ3-201ENST00000388996 TULP1O00294 542 aaPredicted RBP15.81■□□□□ 0.12
KCNQ3-201ENST00000388996 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
KCNQ3-201ENST00000388996 PPP4R2Q9NY27 417 aa15.79■□□□□ 0.12
KCNQ3-201ENST00000388996 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
KCNQ3-201ENST00000388996 HSP90AB1P08238 724 aaKnown RBP15.79■□□□□ 0.12
KCNQ3-201ENST00000388996 VPS8Q8N3P4 1428 aa15.79■□□□□ 0.12
KCNQ3-201ENST00000388996 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
KCNQ3-201ENST00000388996 EIF3AQ14152 1382 aaKnown RBP15.78■□□□□ 0.12
KCNQ3-201ENST00000388996 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
KCNQ3-201ENST00000388996 DNTTIP2Q5QJE6 756 aaKnown RBP15.78■□□□□ 0.12
KCNQ3-201ENST00000388996 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
KCNQ3-201ENST00000388996 DCAF11Q8TEB1 546 aa15.77■□□□□ 0.12
KCNQ3-201ENST00000388996 SRPK2P78362 688 aaKnown RBP15.77■□□□□ 0.12
KCNQ3-201ENST00000388996 KTN1Q86UP2 1357 aaKnown RBP15.77■□□□□ 0.11
KCNQ3-201ENST00000388996 FMN1Q68DA7 1419 aa15.77■□□□□ 0.11
KCNQ3-201ENST00000388996 NAP1L2Q9ULW6 460 aaPredicted RBP15.77■□□□□ 0.11
KCNQ3-201ENST00000388996 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
KCNQ3-201ENST00000388996 SIN3AQ96ST3 1273 aa15.76■□□□□ 0.11
KCNQ3-201ENST00000388996 MORC1Q86VD1 984 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms