RNA–Protein interactions for RNA: ENST00000382041.7

NIN-203, Transcript of ninein, humanhuman

TSL 1 (best) BASIC

Gene NIN, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-203ENST00000382041 CEP162Q5TB80 1403 aa20.9■□□□□ 0.94
NIN-203ENST00000382041 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
NIN-203ENST00000382041 PLEKHD1A6NEE1 506 aa20.87■□□□□ 0.93
NIN-203ENST00000382041 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
NIN-203ENST00000382041 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
NIN-203ENST00000382041 ZBTB7CA1YPR0 619 aa20.85■□□□□ 0.93
NIN-203ENST00000382041 HSP90AA1P07900 732 aaKnown RBP20.85■□□□□ 0.93
NIN-203ENST00000382041 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
NIN-203ENST00000382041 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
NIN-203ENST00000382041 A0A0G2JS52 829 aa20.8■□□□□ 0.92
NIN-203ENST00000382041 PPP1R15AO75807 674 aaPredicted RBP20.78■□□□□ 0.92
NIN-203ENST00000382041 C14orf37Q86TY3 774 aa20.78■□□□□ 0.92
NIN-203ENST00000382041 CFDP1Q9UEE9 299 aaPredicted RBP20.77■□□□□ 0.92
NIN-203ENST00000382041 UPF2Q9HAU5 1272 aaKnown RBP20.75■□□□□ 0.91
NIN-203ENST00000382041 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
NIN-203ENST00000382041 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
NIN-203ENST00000382041 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
NIN-203ENST00000382041 NACADO15069 1562 aa20.71■□□□□ 0.91
NIN-203ENST00000382041 EEA1Q15075 1411 aa20.71■□□□□ 0.91
NIN-203ENST00000382041 CECR2Q9BXF3 1484 aa20.67■□□□□ 0.9
NIN-203ENST00000382041 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
NIN-203ENST00000382041 ERCC6Q03468 1493 aa20.65■□□□□ 0.9
NIN-203ENST00000382041 NBR1Q14596 966 aa20.65■□□□□ 0.9
NIN-203ENST00000382041 ARXQ96QS3 562 aa20.65■□□□□ 0.9
NIN-203ENST00000382041 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
NIN-203ENST00000382041 TNIKQ9UKE5 1360 aa20.63■□□□□ 0.89
NIN-203ENST00000382041 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
NIN-203ENST00000382041 CARD11Q9BXL7 1154 aa20.61■□□□□ 0.89
NIN-203ENST00000382041 ANP32BQ92688 251 aaKnown RBP20.55■□□□□ 0.88
NIN-203ENST00000382041 NEUROD2Q15784 382 aa20.54■□□□□ 0.88
NIN-203ENST00000382041 SOGA1O94964 1423 aa20.54■□□□□ 0.88
NIN-203ENST00000382041 KNSTRNQ9Y448 316 aa20.53■□□□□ 0.88
NIN-203ENST00000382041 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
NIN-203ENST00000382041 TNNT2P45379 298 aaPredicted RBP20.52■□□□□ 0.88
NIN-203ENST00000382041 MYH16Q9H6N6 1097 aa20.52■□□□□ 0.88
NIN-203ENST00000382041 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.87
NIN-203ENST00000382041 CUX2O14529 1486 aa20.48■□□□□ 0.87
NIN-203ENST00000382041 HAP1P54257 671 aaPredicted RBP20.47■□□□□ 0.87
NIN-203ENST00000382041 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
NIN-203ENST00000382041 LMOD2Q6P5Q4 547 aa20.46■□□□□ 0.87
NIN-203ENST00000382041 LAS1LQ9Y4W2 734 aaKnown RBP20.45■□□□□ 0.86
NIN-203ENST00000382041 SUPT16HQ9Y5B9 1047 aaKnown RBP20.45■□□□□ 0.86
NIN-203ENST00000382041 CC2D1BQ5T0F9 858 aaKnown RBP20.45■□□□□ 0.86
NIN-203ENST00000382041 CCNB3Q8WWL7 1395 aa20.45■□□□□ 0.86
NIN-203ENST00000382041 EIF5BO60841 1220 aaKnown RBP20.45■□□□□ 0.86
NIN-203ENST00000382041 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
NIN-203ENST00000382041 POGKQ9P215 609 aa20.44■□□□□ 0.86
NIN-203ENST00000382041 MLECQ14165 292 aa20.44■□□□□ 0.86
NIN-203ENST00000382041 CDCA8Q53HL2 280 aa20.41■□□□□ 0.86
NIN-203ENST00000382041 DCAF11Q8TEB1 546 aa20.4■□□□□ 0.86
NIN-203ENST00000382041 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
NIN-203ENST00000382041 FOXD1Q16676 465 aa20.36■□□□□ 0.85
NIN-203ENST00000382041 SAFB2Q14151 953 aaKnown RBP eCLIP20.35■□□□□ 0.85
NIN-203ENST00000382041 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
NIN-203ENST00000382041 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
NIN-203ENST00000382041 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.85
NIN-203ENST00000382041 SOX12O15370 315 aa20.33■□□□□ 0.84
NIN-203ENST00000382041 FTSJ3Q8IY81 847 aaKnown RBP20.33■□□□□ 0.84
NIN-203ENST00000382041 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
NIN-203ENST00000382041 MAPK8IP3Q9UPT6 1336 aa20.32■□□□□ 0.84
NIN-203ENST00000382041 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
NIN-203ENST00000382041 U2SURPO15042 1029 aaKnown RBP20.32■□□□□ 0.84
NIN-203ENST00000382041 FRAT1Q92837 279 aaPredicted RBP20.32■□□□□ 0.84
NIN-203ENST00000382041 GGT6Q6P531 493 aa20.28■□□□□ 0.84
NIN-203ENST00000382041 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
NIN-203ENST00000382041 TPRNQ4KMQ1 711 aa20.26■□□□□ 0.83
NIN-203ENST00000382041 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
NIN-203ENST00000382041 RGS3P49796 1198 aa20.24■□□□□ 0.83
NIN-203ENST00000382041 SRPK2P78362 688 aaKnown RBP20.22■□□□□ 0.83
NIN-203ENST00000382041 TMF1P82094 1093 aa20.22■□□□□ 0.83
NIN-203ENST00000382041 PKD2Q13563 968 aa20.22■□□□□ 0.83
NIN-203ENST00000382041 STK26Q9P289 416 aa20.22■□□□□ 0.83
NIN-203ENST00000382041 BECN1Q14457 450 aa20.2■□□□□ 0.82
NIN-203ENST00000382041 KANK1Q14678 1352 aa20.19■□□□□ 0.82
NIN-203ENST00000382041 HSPA5P11021 654 aaKnown RBP20.18■□□□□ 0.82
NIN-203ENST00000382041 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
NIN-203ENST00000382041 SETD5Q9C0A6 1442 aa20.16■□□□□ 0.82
NIN-203ENST00000382041 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
NIN-203ENST00000382041 TAOK2Q9UL54 1235 aa20.16■□□□□ 0.82
NIN-203ENST00000382041 B4GALNT3Q6L9W6 998 aa20.16■□□□□ 0.82
NIN-203ENST00000382041 NCLP19338 710 aaKnown RBP20.15■□□□□ 0.82
NIN-203ENST00000382041 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
NIN-203ENST00000382041 MORC1Q86VD1 984 aa20.11■□□□□ 0.81
NIN-203ENST00000382041 PPP4R2Q9NY27 417 aa20.09■□□□□ 0.81
NIN-203ENST00000382041 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.81
NIN-203ENST00000382041 CASC1Q6TDU7 716 aa20.08■□□□□ 0.81
NIN-203ENST00000382041 WIZO95785 1651 aa20.08■□□□□ 0.8
NIN-203ENST00000382041 MPHOSPH9Q99550 1183 aa20.07■□□□□ 0.8
NIN-203ENST00000382041 CARMIL2Q6F5E8 1435 aa20.07■□□□□ 0.8
NIN-203ENST00000382041 OS9Q13438 667 aaPredicted RBP20.07■□□□□ 0.8
NIN-203ENST00000382041 NPHP1O15259 732 aa20.06■□□□□ 0.8
NIN-203ENST00000382041 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
NIN-203ENST00000382041 NUP155O75694 1391 aa20.06■□□□□ 0.8
NIN-203ENST00000382041 HNRNPMP52272 730 aaKnown RBP eCLIP20.05■□□□□ 0.8
NIN-203ENST00000382041 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
NIN-203ENST00000382041 NUTM2DQ5VT03 806 aaPredicted RBP20.05■□□□□ 0.8
NIN-203ENST00000382041 GOLGA6L22H0YM25 854 aa20.03■□□□□ 0.8
NIN-203ENST00000382041 FHOD3Q2V2M9 1422 aa20.02■□□□□ 0.8
NIN-203ENST00000382041 HDGFP51858 240 aaKnown RBP20.01■□□□□ 0.79
NIN-203ENST00000382041 ROCK2O75116 1388 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms