RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
FREM1-201ENST00000380875 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.31□□□□□ -0.44
FREM1-201ENST00000380875 AEBP2Q6ZN18 517 aaPredicted RBP12.31□□□□□ -0.44
FREM1-201ENST00000380875 RGL3Q3MIN7 710 aa12.3□□□□□ -0.44
FREM1-201ENST00000380875 POGKQ9P215 609 aa12.29□□□□□ -0.44
FREM1-201ENST00000380875 RRP7BPQ9NSQ0 103 aa12.28□□□□□ -0.44
FREM1-201ENST00000380875 TAOK2Q9UL54 1235 aa12.27□□□□□ -0.45
FREM1-201ENST00000380875 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.456e-7■■■■□ 23
FREM1-201ENST00000380875 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
FREM1-201ENST00000380875 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
FREM1-201ENST00000380875 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
FREM1-201ENST00000380875 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
FREM1-201ENST00000380875 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
FREM1-201ENST00000380875 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
FREM1-201ENST00000380875 SOX12O15370 315 aa12.21□□□□□ -0.46
FREM1-201ENST00000380875 RB1CC1Q8TDY2 1594 aa12.2□□□□□ -0.46
FREM1-201ENST00000380875 CLSTN1O94985 981 aa12.19□□□□□ -0.46
FREM1-201ENST00000380875 CFDP1Q9UEE9 299 aaPredicted RBP12.18□□□□□ -0.46
FREM1-201ENST00000380875 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
FREM1-201ENST00000380875 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
FREM1-201ENST00000380875 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
FREM1-201ENST00000380875 TPRNQ4KMQ1 711 aa12.16□□□□□ -0.46
FREM1-201ENST00000380875 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
FREM1-201ENST00000380875 MRS2Q9HD23 443 aa12.15□□□□□ -0.46
FREM1-201ENST00000380875 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.46
FREM1-201ENST00000380875 TMX4Q9H1E5 349 aaPredicted RBP12.14□□□□□ -0.47
FREM1-201ENST00000380875 RSF1Q96T23 1441 aaPredicted RBP12.14□□□□□ -0.47
FREM1-201ENST00000380875 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
FREM1-201ENST00000380875 FKBP8Q14318 412 aa12.14□□□□□ -0.47
FREM1-201ENST00000380875 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
FREM1-201ENST00000380875 PAK3O75914 559 aaPredicted RBP12.12□□□□□ -0.47
FREM1-201ENST00000380875 NCLP19338 710 aaKnown RBP12.12□□□□□ -0.47
FREM1-201ENST00000380875 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
FREM1-201ENST00000380875 KNSTRNQ9Y448 316 aa12.12□□□□□ -0.47
FREM1-201ENST00000380875 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
FREM1-201ENST00000380875 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
FREM1-201ENST00000380875 ZRSR1Q15695 479 aaKnown RBP12.12□□□□□ -0.47
FREM1-201ENST00000380875 CASC1Q6TDU7 716 aa12.12□□□□□ -0.47
FREM1-201ENST00000380875 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
FREM1-201ENST00000380875 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
FREM1-201ENST00000380875 KANK1Q14678 1352 aa12.11□□□□□ -0.47
FREM1-201ENST00000380875 CDCA8Q53HL2 280 aa12.11□□□□□ -0.47
FREM1-201ENST00000380875 ZNF330Q9Y3S2 320 aaPredicted RBP12.1□□□□□ -0.47
FREM1-201ENST00000380875 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
FREM1-201ENST00000380875 FTSJ3Q8IY81 847 aaKnown RBP12.09□□□□□ -0.47
FREM1-201ENST00000380875 NUDCQ9Y266 331 aa12.09□□□□□ -0.47
FREM1-201ENST00000380875 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
FREM1-201ENST00000380875 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
FREM1-201ENST00000380875 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
FREM1-201ENST00000380875 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
FREM1-201ENST00000380875 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
FREM1-201ENST00000380875 SRPK2P78362 688 aaKnown RBP12.06□□□□□ -0.48
FREM1-201ENST00000380875 GGT6Q6P531 493 aa12.06□□□□□ -0.48
FREM1-201ENST00000380875 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
FREM1-201ENST00000380875 CARD11Q9BXL7 1154 aa12.05□□□□□ -0.48
FREM1-201ENST00000380875 FGD1P98174 961 aa12.05□□□□□ -0.48
FREM1-201ENST00000380875 G3V3G9 751 aa12.04□□□□□ -0.48
FREM1-201ENST00000380875 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
FREM1-201ENST00000380875 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
FREM1-201ENST00000380875 STK26Q9P289 416 aa12.04□□□□□ -0.48
FREM1-201ENST00000380875 PHF23Q9BUL5 403 aaPredicted RBP12.04□□□□□ -0.48
FREM1-201ENST00000380875 KCNJ4P48050 445 aa12.01□□□□□ -0.49
FREM1-201ENST00000380875 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
FREM1-201ENST00000380875 CLIP1P30622 1438 aa12.01□□□□□ -0.49
FREM1-201ENST00000380875 MSH5O43196 834 aa11.99□□□□□ -0.49
FREM1-201ENST00000380875 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
FREM1-201ENST00000380875 CC2D1BQ5T0F9 858 aaKnown RBP11.98□□□□□ -0.49
FREM1-201ENST00000380875 CCNB3Q8WWL7 1395 aa11.98□□□□□ -0.49
FREM1-201ENST00000380875 PNNQ9H307 717 aaKnown RBP11.98□□□□□ -0.49
FREM1-201ENST00000380875 EIF5BO60841 1220 aaKnown RBP11.97□□□□□ -0.49
FREM1-201ENST00000380875 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.5
FREM1-201ENST00000380875 EID1Q9Y6B2 187 aa11.95□□□□□ -0.5
FREM1-201ENST00000380875 NBR1Q14596 966 aa11.95□□□□□ -0.5
FREM1-201ENST00000380875 BECN1Q14457 450 aa11.95□□□□□ -0.5
FREM1-201ENST00000380875 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
FREM1-201ENST00000380875 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
FREM1-201ENST00000380875 DCAF8L1A6NGE4 600 aa11.94□□□□□ -0.5
FREM1-201ENST00000380875 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
FREM1-201ENST00000380875 PRM3Q9NNZ6 103 aa11.93□□□□□ -0.5
FREM1-201ENST00000380875 HDGFL2Q7Z4V5 671 aaPredicted RBP11.92□□□□□ -0.5
FREM1-201ENST00000380875 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
FREM1-201ENST00000380875 PTMAP06454 111 aaKnown RBP11.9□□□□□ -0.5
FREM1-201ENST00000380875 CHMP3Q9Y3E7 222 aa11.9□□□□□ -0.51
FREM1-201ENST00000380875 DCAF11Q8TEB1 546 aa11.89□□□□□ -0.51
FREM1-201ENST00000380875 MORC1Q86VD1 984 aa11.89□□□□□ -0.51
FREM1-201ENST00000380875 GOLGA3Q08378 1498 aa11.88□□□□□ -0.51
FREM1-201ENST00000380875 GNL2Q13823 731 aaKnown RBP11.88□□□□□ -0.51
FREM1-201ENST00000380875 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
FREM1-201ENST00000380875 TMF1P82094 1093 aa11.88□□□□□ -0.51
FREM1-201ENST00000380875 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
FREM1-201ENST00000380875 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
FREM1-201ENST00000380875 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
FREM1-201ENST00000380875 EVA1CP58658 441 aa11.87□□□□□ -0.51
FREM1-201ENST00000380875 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
FREM1-201ENST00000380875 NUTM2DQ5VT03 806 aaPredicted RBP11.87□□□□□ -0.51
FREM1-201ENST00000380875 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
FREM1-201ENST00000380875 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
FREM1-201ENST00000380875 CARMIL2Q6F5E8 1435 aa11.86□□□□□ -0.51
FREM1-201ENST00000380875 NGDNQ8NEJ9 315 aaKnown RBP11.85□□□□□ -0.51
FREM1-201ENST00000380875 GORABQ5T7V8 394 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms