RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 NRDCO43847 1150 aa14.9□□□□□ -0.02
ITM2B-202ENST00000378565 CASC1Q6TDU7 716 aa14.9□□□□□ -0.02
ITM2B-202ENST00000378565 L1TD1Q5T7N2 865 aaKnown RBP14.9□□□□□ -0.02
ITM2B-202ENST00000378565 TNNT3P45378 269 aaPredicted RBP14.8□□□□□ -0.04
ITM2B-202ENST00000378565 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
ITM2B-202ENST00000378565 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.77□□□□□ -0.04
ITM2B-202ENST00000378565 PPP4R2Q9NY27 417 aa14.76□□□□□ -0.05
ITM2B-202ENST00000378565 ARID4BQ4LE39 1312 aaPredicted RBP14.76□□□□□ -0.05
ITM2B-202ENST00000378565 TPRNQ4KMQ1 711 aa14.74□□□□□ -0.05
ITM2B-202ENST00000378565 HSP90AB1P08238 724 aaKnown RBP14.74□□□□□ -0.05
ITM2B-202ENST00000378565 SUPT16HQ9Y5B9 1047 aaKnown RBP14.74□□□□□ -0.05
ITM2B-202ENST00000378565 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
ITM2B-202ENST00000378565 PNNQ9H307 717 aaKnown RBP14.73□□□□□ -0.05
ITM2B-202ENST00000378565 ZNF777Q9ULD5 760 aaPredicted RBP14.69□□□□□ -0.06
ITM2B-202ENST00000378565 HSCBQ8IWL3 235 aa14.69□□□□□ -0.06
ITM2B-202ENST00000378565 DRC7Q8IY82 874 aa14.68□□□□□ -0.06
ITM2B-202ENST00000378565 KIAA2012Q0VF49 1180 aa14.67□□□□□ -0.06
ITM2B-202ENST00000378565 PTMSP20962 102 aa14.67□□□□□ -0.06
ITM2B-202ENST00000378565 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.06
ITM2B-202ENST00000378565 HSP90AA2PQ14568 343 aaPredicted RBP14.65□□□□□ -0.06
ITM2B-202ENST00000378565 ARID3AQ99856 593 aa14.65□□□□□ -0.06
ITM2B-202ENST00000378565 RGS3P49796 1198 aa14.65□□□□□ -0.06
ITM2B-202ENST00000378565 GOLGA6L4A6NEF3 574 aa14.64□□□□□ -0.07
ITM2B-202ENST00000378565 RSPH6AQ9H0K4 717 aa14.64□□□□□ -0.07
ITM2B-202ENST00000378565 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
ITM2B-202ENST00000378565 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
ITM2B-202ENST00000378565 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
ITM2B-202ENST00000378565 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
ITM2B-202ENST00000378565 ARID3CA6NKF2 412 aa14.6□□□□□ -0.07
ITM2B-202ENST00000378565 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
ITM2B-202ENST00000378565 GOLGA6L1Q8N7Z2 621 aa14.59□□□□□ -0.07
ITM2B-202ENST00000378565 GBP4Q96PP9 640 aa14.58□□□□□ -0.08
ITM2B-202ENST00000378565 ESF1Q9H501 851 aaKnown RBP14.58□□□□□ -0.08
ITM2B-202ENST00000378565 CHGAP10645 457 aaKnown RBP14.57□□□□□ -0.08
ITM2B-202ENST00000378565 FGD1P98174 961 aa14.56□□□□□ -0.08
ITM2B-202ENST00000378565 HIRIP3Q9BW71 556 aaPredicted RBP14.56□□□□□ -0.08
ITM2B-202ENST00000378565 NOC3LQ8WTT2 800 aaKnown RBP14.56□□□□□ -0.08
ITM2B-202ENST00000378565 FBLN2P98095 1184 aa14.55□□□□□ -0.08
ITM2B-202ENST00000378565 B4GALNT3Q6L9W6 998 aa14.55□□□□□ -0.08
ITM2B-202ENST00000378565 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
ITM2B-202ENST00000378565 SYAP1Q96A49 352 aaPredicted RBP14.53□□□□□ -0.08
ITM2B-202ENST00000378565 USP35Q9P2H5 1018 aa14.53□□□□□ -0.08
ITM2B-202ENST00000378565 MS4A1P11836 297 aa14.53□□□□□ -0.08
ITM2B-202ENST00000378565 CALRP27797 417 aaKnown RBP14.53□□□□□ -0.08
ITM2B-202ENST00000378565 CFAP53Q96M91 514 aa14.53□□□□□ -0.08
ITM2B-202ENST00000378565 TULP1O00294 542 aaPredicted RBP14.53□□□□□ -0.08
ITM2B-202ENST00000378565 KDM2AQ9Y2K7 1162 aa14.53□□□□□ -0.08
ITM2B-202ENST00000378565 CFAP44Q96MT7 982 aa14.51□□□□□ -0.09
ITM2B-202ENST00000378565 MCCP23508 829 aa14.51□□□□□ -0.09
ITM2B-202ENST00000378565 GOLGA6L3A6NEY3 463 aa14.51□□□□□ -0.09
ITM2B-202ENST00000378565 KCNJ4P48050 445 aa14.51□□□□□ -0.09
ITM2B-202ENST00000378565 KNSTRNQ9Y448 316 aa14.5□□□□□ -0.09
ITM2B-202ENST00000378565 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
ITM2B-202ENST00000378565 GZF1Q9H116 711 aaPredicted RBP14.49□□□□□ -0.09
ITM2B-202ENST00000378565 ZBTB7CA1YPR0 619 aa14.47□□□□□ -0.09
ITM2B-202ENST00000378565 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
ITM2B-202ENST00000378565 CDCA8Q53HL2 280 aa14.46□□□□□ -0.09
ITM2B-202ENST00000378565 CHIC2Q9UKJ5 165 aa14.45□□□□□ -0.1
ITM2B-202ENST00000378565 FRAT1Q92837 279 aaPredicted RBP14.45□□□□□ -0.1
ITM2B-202ENST00000378565 NAP1L2Q9ULW6 460 aaPredicted RBP14.44□□□□□ -0.1
ITM2B-202ENST00000378565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.15e-8■□□□□ 10.7
ITM2B-202ENST00000378565 MTUS2Q5JR59 1369 aa14.43□□□□□ -0.1
ITM2B-202ENST00000378565 PHF14O94880 888 aa14.42□□□□□ -0.1
ITM2B-202ENST00000378565 TAOK2Q9UL54 1235 aa14.42□□□□□ -0.1
ITM2B-202ENST00000378565 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
ITM2B-202ENST00000378565 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
ITM2B-202ENST00000378565 MAPK8IP3Q9UPT6 1336 aa14.41□□□□□ -0.1
ITM2B-202ENST00000378565 OS9Q13438 667 aaPredicted RBP14.41□□□□□ -0.1
ITM2B-202ENST00000378565 CLIP1P30622 1438 aa14.4□□□□□ -0.1
ITM2B-202ENST00000378565 GNL2Q13823 731 aaKnown RBP14.39□□□□□ -0.11
ITM2B-202ENST00000378565 SLKQ9H2G2 1235 aaPredicted RBP14.39□□□□□ -0.11
ITM2B-202ENST00000378565 TPM4P67936 248 aa14.39□□□□□ -0.11
ITM2B-202ENST00000378565 HTATSF1O43719 755 aaKnown RBP14.39□□□□□ -0.11
ITM2B-202ENST00000378565 SENP3-EIF4A1A0A087X0R7 540 aa14.38□□□□□ -0.11
ITM2B-202ENST00000378565 TCERG1O14776 1098 aaKnown RBP14.37□□□□□ -0.11
ITM2B-202ENST00000378565 ZNF771Q7L3S4 317 aaPredicted RBP14.36□□□□□ -0.11
ITM2B-202ENST00000378565 CLSTN1O94985 981 aa14.35□□□□□ -0.11
ITM2B-202ENST00000378565 A0A0G2JS52 829 aa14.35□□□□□ -0.11
ITM2B-202ENST00000378565 TSPY4P0CV99 314 aa14.35□□□□□ -0.11
ITM2B-202ENST00000378565 TSPY10P0CW01 314 aa14.35□□□□□ -0.11
ITM2B-202ENST00000378565 NEUROD2Q15784 382 aa14.34□□□□□ -0.11
ITM2B-202ENST00000378565 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
ITM2B-202ENST00000378565 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
ITM2B-202ENST00000378565 DDX11L8A8MPP1 907 aa14.33□□□□□ -0.12
ITM2B-202ENST00000378565 NUDCQ9Y266 331 aa14.32□□□□□ -0.12
ITM2B-202ENST00000378565 CCER2I3L3R5 266 aa14.32□□□□□ -0.12
ITM2B-202ENST00000378565 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
ITM2B-202ENST00000378565 GPS2Q13227 327 aa14.31□□□□□ -0.12
ITM2B-202ENST00000378565 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
ITM2B-202ENST00000378565 SCRIBQ14160 1630 aa14.31□□□□□ -0.12
ITM2B-202ENST00000378565 CCDC34Q96HJ3 373 aa14.31□□□□□ -0.12
ITM2B-202ENST00000378565 TEX35Q5T0J7 233 aa14.29□□□□□ -0.12
ITM2B-202ENST00000378565 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
ITM2B-202ENST00000378565 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
ITM2B-202ENST00000378565 C14orf37Q86TY3 774 aa14.29□□□□□ -0.12
ITM2B-202ENST00000378565 GSE1Q14687 1217 aa14.28□□□□□ -0.12
ITM2B-202ENST00000378565 CARD11Q9BXL7 1154 aa14.28□□□□□ -0.12
ITM2B-202ENST00000378565 NOM1Q5C9Z4 860 aaKnown RBP14.27□□□□□ -0.13
ITM2B-202ENST00000378565 CEP162Q5TB80 1403 aa14.27□□□□□ -0.13
ITM2B-202ENST00000378565 TPM3P06753 285 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms