RNA–Protein interactions for RNA: ENST00000377967.8

KDM6A-201, Transcript of lysine demethylase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM6A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-201ENST00000377967 GOLGA3Q08378 1498 aa16.51■□□□□ 0.23
KDM6A-201ENST00000377967 CECR2Q9BXF3 1484 aa16.51■□□□□ 0.23
KDM6A-201ENST00000377967 MLECQ14165 292 aa16.48■□□□□ 0.23
KDM6A-201ENST00000377967 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
KDM6A-201ENST00000377967 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
KDM6A-201ENST00000377967 RGL3Q3MIN7 710 aa16.46■□□□□ 0.23
KDM6A-201ENST00000377967 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
KDM6A-201ENST00000377967 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
KDM6A-201ENST00000377967 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
KDM6A-201ENST00000377967 CUX2O14529 1486 aa16.44■□□□□ 0.22
KDM6A-201ENST00000377967 LMOD2Q6P5Q4 547 aa16.43■□□□□ 0.22
KDM6A-201ENST00000377967 CDCA8Q53HL2 280 aa16.43■□□□□ 0.22
KDM6A-201ENST00000377967 CCNB3Q8WWL7 1395 aa16.42■□□□□ 0.22
KDM6A-201ENST00000377967 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
KDM6A-201ENST00000377967 KANK1Q14678 1352 aa16.42■□□□□ 0.22
KDM6A-201ENST00000377967 POGKQ9P215 609 aa16.42■□□□□ 0.22
KDM6A-201ENST00000377967 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
KDM6A-201ENST00000377967 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
KDM6A-201ENST00000377967 SOGA1O94964 1423 aa16.38■□□□□ 0.21
KDM6A-201ENST00000377967 MYT1Q01538 1121 aa16.36■□□□□ 0.21
KDM6A-201ENST00000377967 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
KDM6A-201ENST00000377967 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.212e-7■■■■■ 35.3
KDM6A-201ENST00000377967 TDRD9Q8NDG6 1382 aaKnown RBP16.33■□□□□ 0.21
KDM6A-201ENST00000377967 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
KDM6A-201ENST00000377967 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
KDM6A-201ENST00000377967 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
KDM6A-201ENST00000377967 GGT6Q6P531 493 aa16.32■□□□□ 0.2
KDM6A-201ENST00000377967 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
KDM6A-201ENST00000377967 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
KDM6A-201ENST00000377967 CEP162Q5TB80 1403 aa16.3■□□□□ 0.2
KDM6A-201ENST00000377967 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
KDM6A-201ENST00000377967 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
KDM6A-201ENST00000377967 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
KDM6A-201ENST00000377967 ARXQ96QS3 562 aa16.28■□□□□ 0.2
KDM6A-201ENST00000377967 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
KDM6A-201ENST00000377967 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
KDM6A-201ENST00000377967 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
KDM6A-201ENST00000377967 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
KDM6A-201ENST00000377967 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
KDM6A-201ENST00000377967 HNRNPUQ00839 825 aaKnown RBP eCLIP16.23■□□□□ 0.19
KDM6A-201ENST00000377967 MYH16Q9H6N6 1097 aa16.23■□□□□ 0.19
KDM6A-201ENST00000377967 CARD11Q9BXL7 1154 aa16.22■□□□□ 0.19
KDM6A-201ENST00000377967 NPHP1O15259 732 aa16.22■□□□□ 0.19
KDM6A-201ENST00000377967 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
KDM6A-201ENST00000377967 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
KDM6A-201ENST00000377967 UPF2Q9HAU5 1272 aaKnown RBP16.19■□□□□ 0.18
KDM6A-201ENST00000377967 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
KDM6A-201ENST00000377967 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
KDM6A-201ENST00000377967 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
KDM6A-201ENST00000377967 EID1Q9Y6B2 187 aa16.16■□□□□ 0.18
KDM6A-201ENST00000377967 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
KDM6A-201ENST00000377967 MROH2BQ7Z745 1585 aa16.15■□□□□ 0.18
KDM6A-201ENST00000377967 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
KDM6A-201ENST00000377967 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
KDM6A-201ENST00000377967 FMN1Q68DA7 1419 aa16.11■□□□□ 0.17
KDM6A-201ENST00000377967 RSPH4AQ5TD94 716 aa16.11■□□□□ 0.17
KDM6A-201ENST00000377967 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
KDM6A-201ENST00000377967 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
KDM6A-201ENST00000377967 KIF3BO15066 747 aa16.08■□□□□ 0.16
KDM6A-201ENST00000377967 PNNQ9H307 717 aaKnown RBP16.08■□□□□ 0.16
KDM6A-201ENST00000377967 DCAF11Q8TEB1 546 aa16.08■□□□□ 0.16
KDM6A-201ENST00000377967 SPAG9O60271 1321 aaKnown RBP16.07■□□□□ 0.16
KDM6A-201ENST00000377967 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
KDM6A-201ENST00000377967 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
KDM6A-201ENST00000377967 TMF1P82094 1093 aa16.05■□□□□ 0.16
KDM6A-201ENST00000377967 HIRIP3Q9BW71 556 aaPredicted RBP16.05■□□□□ 0.16
KDM6A-201ENST00000377967 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
KDM6A-201ENST00000377967 STK26Q9P289 416 aa16.04■□□□□ 0.16
KDM6A-201ENST00000377967 PTPRGP23470 1445 aa16.03■□□□□ 0.16
KDM6A-201ENST00000377967 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
KDM6A-201ENST00000377967 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.15
KDM6A-201ENST00000377967 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.15
KDM6A-201ENST00000377967 SOX12O15370 315 aa16.01■□□□□ 0.15
KDM6A-201ENST00000377967 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
KDM6A-201ENST00000377967 ANKRD30AQ9BXX3 1397 aa16.01■□□□□ 0.15
KDM6A-201ENST00000377967 CSB-PGBD3P0DP91 1061 aa16.01■□□□□ 0.15
KDM6A-201ENST00000377967 TOP2AP11388 1531 aaKnown RBP16■□□□□ 0.15
KDM6A-201ENST00000377967 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
KDM6A-201ENST00000377967 U2SURPO15042 1029 aaKnown RBP15.99■□□□□ 0.15
KDM6A-201ENST00000377967 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
KDM6A-201ENST00000377967 TNNT2P45379 298 aaPredicted RBP15.98■□□□□ 0.15
KDM6A-201ENST00000377967 PKD2Q13563 968 aa15.98■□□□□ 0.15
KDM6A-201ENST00000377967 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
KDM6A-201ENST00000377967 FAM69CQ0P6D2 419 aa15.97■□□□□ 0.15
KDM6A-201ENST00000377967 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
KDM6A-201ENST00000377967 HNRNPMP52272 730 aaKnown RBP eCLIP15.95■□□□□ 0.147e-7■■■■□ 24.2
KDM6A-201ENST00000377967 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
KDM6A-201ENST00000377967 GTF3C3Q9Y5Q9 886 aa15.95■□□□□ 0.14
KDM6A-201ENST00000377967 NUP155O75694 1391 aa15.95■□□□□ 0.14
KDM6A-201ENST00000377967 GOLGA2Q08379 1002 aa15.92■□□□□ 0.14
KDM6A-201ENST00000377967 CHMP4BQ9H444 224 aaKnown RBP15.92■□□□□ 0.14
KDM6A-201ENST00000377967 CCDC18Q5T9S5 1454 aa15.92■□□□□ 0.14
KDM6A-201ENST00000377967 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
KDM6A-201ENST00000377967 RTF1Q92541 710 aaKnown RBP15.91■□□□□ 0.14
KDM6A-201ENST00000377967 ANP32BQ92688 251 aaKnown RBP15.91■□□□□ 0.14
KDM6A-201ENST00000377967 FTSJ3Q8IY81 847 aaKnown RBP15.91■□□□□ 0.14
KDM6A-201ENST00000377967 FKBP8Q14318 412 aa15.9■□□□□ 0.14
KDM6A-201ENST00000377967 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
KDM6A-201ENST00000377967 SIN3AQ96ST3 1273 aa15.88■□□□□ 0.13
KDM6A-201ENST00000377967 TMX4Q9H1E5 349 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms