RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 PLEKHD1A6NEE1 506 aa23.82■■□□□ 1.4
CNTNAP3-204ENST00000377656 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
CNTNAP3-204ENST00000377656 MIER1Q8N108 512 aa23.79■■□□□ 1.4
CNTNAP3-204ENST00000377656 KCNH8Q96L42 1107 aa23.78■■□□□ 1.4
CNTNAP3-204ENST00000377656 NACADO15069 1562 aa23.77■■□□□ 1.39
CNTNAP3-204ENST00000377656 ANP32BQ92688 251 aaKnown RBP23.77■■□□□ 1.39
CNTNAP3-204ENST00000377656 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
CNTNAP3-204ENST00000377656 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
CNTNAP3-204ENST00000377656 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
CNTNAP3-204ENST00000377656 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
CNTNAP3-204ENST00000377656 CFDP1Q9UEE9 299 aaPredicted RBP23.65■■□□□ 1.38
CNTNAP3-204ENST00000377656 RGL3Q3MIN7 710 aa23.64■■□□□ 1.38
CNTNAP3-204ENST00000377656 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.37
CNTNAP3-204ENST00000377656 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
CNTNAP3-204ENST00000377656 IRX6P78412 446 aaPredicted RBP23.58■■□□□ 1.36
CNTNAP3-204ENST00000377656 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
CNTNAP3-204ENST00000377656 MYH16Q9H6N6 1097 aa23.56■■□□□ 1.36
CNTNAP3-204ENST00000377656 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
CNTNAP3-204ENST00000377656 CDCA8Q53HL2 280 aa23.53■■□□□ 1.36
CNTNAP3-204ENST00000377656 CECR2Q9BXF3 1484 aa23.52■■□□□ 1.36
CNTNAP3-204ENST00000377656 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
CNTNAP3-204ENST00000377656 CFAP53Q96M91 514 aa23.48■■□□□ 1.35
CNTNAP3-204ENST00000377656 KNSTRNQ9Y448 316 aa23.47■■□□□ 1.35
CNTNAP3-204ENST00000377656 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
CNTNAP3-204ENST00000377656 ZBTB7CA1YPR0 619 aa23.45■■□□□ 1.34
CNTNAP3-204ENST00000377656 A0A0G2JS52 829 aa23.43■■□□□ 1.34
CNTNAP3-204ENST00000377656 NBR1Q14596 966 aa23.43■■□□□ 1.34
CNTNAP3-204ENST00000377656 PLEKHG5O94827 1062 aa23.43■■□□□ 1.34
CNTNAP3-204ENST00000377656 EIF5BO60841 1220 aaKnown RBP23.41■■□□□ 1.34
CNTNAP3-204ENST00000377656 ARID4BQ4LE39 1312 aaPredicted RBP23.4■■□□□ 1.34
CNTNAP3-204ENST00000377656 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
CNTNAP3-204ENST00000377656 PPM1GO15355 546 aaPredicted RBP23.34■■□□□ 1.33
CNTNAP3-204ENST00000377656 SOGA1O94964 1423 aa23.33■■□□□ 1.33
CNTNAP3-204ENST00000377656 ARXQ96QS3 562 aa23.33■■□□□ 1.32
CNTNAP3-204ENST00000377656 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
CNTNAP3-204ENST00000377656 SENP3-EIF4A1A0A087X0R7 540 aa23.31■■□□□ 1.32
CNTNAP3-204ENST00000377656 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
CNTNAP3-204ENST00000377656 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
CNTNAP3-204ENST00000377656 BECN1Q14457 450 aa23.3■■□□□ 1.32
CNTNAP3-204ENST00000377656 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
CNTNAP3-204ENST00000377656 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
CNTNAP3-204ENST00000377656 POGKQ9P215 609 aa23.27■■□□□ 1.32
CNTNAP3-204ENST00000377656 DDRGK1Q96HY6 314 aa23.26■■□□□ 1.31
CNTNAP3-204ENST00000377656 NUDCQ9Y266 331 aa23.26■■□□□ 1.31
CNTNAP3-204ENST00000377656 SUPT16HQ9Y5B9 1047 aaKnown RBP23.26■■□□□ 1.31
CNTNAP3-204ENST00000377656 NEUROD2Q15784 382 aa23.25■■□□□ 1.31
CNTNAP3-204ENST00000377656 HAP1P54257 671 aaPredicted RBP23.25■■□□□ 1.31
CNTNAP3-204ENST00000377656 MAPK8IP3Q9UPT6 1336 aa23.25■■□□□ 1.31
CNTNAP3-204ENST00000377656 FTSJ3Q8IY81 847 aaKnown RBP23.23■■□□□ 1.31
CNTNAP3-204ENST00000377656 CUX2O14529 1486 aa23.22■■□□□ 1.31
CNTNAP3-204ENST00000377656 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
CNTNAP3-204ENST00000377656 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
CNTNAP3-204ENST00000377656 TIMELESSQ9UNS1 1208 aa23.17■■□□□ 1.3
CNTNAP3-204ENST00000377656 DCAF11Q8TEB1 546 aa23.16■■□□□ 1.3
CNTNAP3-204ENST00000377656 NCLP19338 710 aaKnown RBP23.16■■□□□ 1.3
CNTNAP3-204ENST00000377656 LAS1LQ9Y4W2 734 aaKnown RBP23.15■■□□□ 1.3
CNTNAP3-204ENST00000377656 GOLGA6L22H0YM25 854 aa23.14■■□□□ 1.3
CNTNAP3-204ENST00000377656 TNNT2P45379 298 aaPredicted RBP23.14■■□□□ 1.29
CNTNAP3-204ENST00000377656 ANP32EQ9BTT0 268 aa23.13■■□□□ 1.29
CNTNAP3-204ENST00000377656 TMF1P82094 1093 aa23.13■■□□□ 1.29
CNTNAP3-204ENST00000377656 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
CNTNAP3-204ENST00000377656 LMOD2Q6P5Q4 547 aa23.12■■□□□ 1.29
CNTNAP3-204ENST00000377656 ABCC8Q09428 1581 aa23.12■■□□□ 1.29
CNTNAP3-204ENST00000377656 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
CNTNAP3-204ENST00000377656 KANK1Q14678 1352 aa23.1■■□□□ 1.29
CNTNAP3-204ENST00000377656 CASC1Q6TDU7 716 aa23.09■■□□□ 1.29
CNTNAP3-204ENST00000377656 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
CNTNAP3-204ENST00000377656 FRAT1Q92837 279 aaPredicted RBP23.09■■□□□ 1.29
CNTNAP3-204ENST00000377656 U2SURPO15042 1029 aaKnown RBP23.08■■□□□ 1.29
CNTNAP3-204ENST00000377656 CHMP4BQ9H444 224 aaKnown RBP23.05■■□□□ 1.28
CNTNAP3-204ENST00000377656 MS4A1P11836 297 aa23.04■■□□□ 1.28
CNTNAP3-204ENST00000377656 PNNQ9H307 717 aaKnown RBP23.03■■□□□ 1.28
CNTNAP3-204ENST00000377656 RGS3P49796 1198 aa23.03■■□□□ 1.28
CNTNAP3-204ENST00000377656 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
CNTNAP3-204ENST00000377656 CDK11BP21127 795 aaKnown RBP23.02■■□□□ 1.28
CNTNAP3-204ENST00000377656 GLIPR1L2Q4G1C9 344 aa23.01■■□□□ 1.27
CNTNAP3-204ENST00000377656 SETD5Q9C0A6 1442 aa23.01■■□□□ 1.27
CNTNAP3-204ENST00000377656 TRIM44Q96DX7 344 aaPredicted RBP23.01■■□□□ 1.27
CNTNAP3-204ENST00000377656 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
CNTNAP3-204ENST00000377656 SRPK2P78362 688 aaKnown RBP22.98■■□□□ 1.27
CNTNAP3-204ENST00000377656 PKD2Q13563 968 aa22.98■■□□□ 1.27
CNTNAP3-204ENST00000377656 ARHGAP35Q9NRY4 1499 aa22.98■■□□□ 1.27
CNTNAP3-204ENST00000377656 MLECQ14165 292 aa22.97■■□□□ 1.27
CNTNAP3-204ENST00000377656 WIZO95785 1651 aa22.95■■□□□ 1.26
CNTNAP3-204ENST00000377656 KANK4Q5T7N3 995 aaPredicted RBP22.95■■□□□ 1.26
CNTNAP3-204ENST00000377656 GGT6Q6P531 493 aa22.95■■□□□ 1.26
CNTNAP3-204ENST00000377656 CARMIL2Q6F5E8 1435 aa22.94■■□□□ 1.26
CNTNAP3-204ENST00000377656 CCER2I3L3R5 266 aa22.94■■□□□ 1.26
CNTNAP3-204ENST00000377656 ZRSR1Q15695 479 aaKnown RBP22.94■■□□□ 1.26
CNTNAP3-204ENST00000377656 MORC1Q86VD1 984 aa22.93■■□□□ 1.26
CNTNAP3-204ENST00000377656 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
CNTNAP3-204ENST00000377656 SAFB2Q14151 953 aaKnown RBP eCLIP22.9■■□□□ 1.26
CNTNAP3-204ENST00000377656 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
CNTNAP3-204ENST00000377656 B4GALNT3Q6L9W6 998 aa22.89■■□□□ 1.26
CNTNAP3-204ENST00000377656 OS9Q13438 667 aaPredicted RBP22.89■■□□□ 1.25
CNTNAP3-204ENST00000377656 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
CNTNAP3-204ENST00000377656 TRHP20396 242 aaPredicted RBP22.87■■□□□ 1.25
CNTNAP3-204ENST00000377656 FMN1Q68DA7 1419 aa22.87■■□□□ 1.25
CNTNAP3-204ENST00000377656 SOX12O15370 315 aa22.87■■□□□ 1.25
CNTNAP3-204ENST00000377656 FOXD1Q16676 465 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms