RNA–Protein interactions for RNA: ENST00000376265.2

CACNA1F-203, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNA1F, Length 6,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-203ENST00000376265 MRS2Q9HD23 443 aa17.08■□□□□ 0.33
CACNA1F-203ENST00000376265 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
CACNA1F-203ENST00000376265 WDR43Q15061 677 aaKnown RBP eCLIP17.08■□□□□ 0.32
CACNA1F-203ENST00000376265 PLEKHD1A6NEE1 506 aa17.08■□□□□ 0.32
CACNA1F-203ENST00000376265 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
CACNA1F-203ENST00000376265 MIER1Q8N108 512 aa17.06■□□□□ 0.32
CACNA1F-203ENST00000376265 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
CACNA1F-203ENST00000376265 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
CACNA1F-203ENST00000376265 EIF4G2P78344 907 aaKnown RBP eCLIP17.04■□□□□ 0.32
CACNA1F-203ENST00000376265 ERCC6Q03468 1493 aa17■□□□□ 0.31
CACNA1F-203ENST00000376265 CCDC136Q96JN2 1154 aa16.99■□□□□ 0.31
CACNA1F-203ENST00000376265 CFDP1Q9UEE9 299 aaPredicted RBP16.98■□□□□ 0.31
CACNA1F-203ENST00000376265 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
CACNA1F-203ENST00000376265 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
CACNA1F-203ENST00000376265 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
CACNA1F-203ENST00000376265 IRX6P78412 446 aaPredicted RBP16.95■□□□□ 0.3
CACNA1F-203ENST00000376265 UPF2Q9HAU5 1272 aaKnown RBP16.95■□□□□ 0.3
CACNA1F-203ENST00000376265 PPP1R15AO75807 674 aaPredicted RBP16.93■□□□□ 0.3
CACNA1F-203ENST00000376265 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
CACNA1F-203ENST00000376265 SOGA1O94964 1423 aa16.89■□□□□ 0.29
CACNA1F-203ENST00000376265 ZBTB7CA1YPR0 619 aa16.88■□□□□ 0.29
CACNA1F-203ENST00000376265 CUX2O14529 1486 aa16.88■□□□□ 0.29
CACNA1F-203ENST00000376265 PLEKHG5O94827 1062 aa16.88■□□□□ 0.29
CACNA1F-203ENST00000376265 EIF5BO60841 1220 aaKnown RBP16.87■□□□□ 0.29
CACNA1F-203ENST00000376265 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
CACNA1F-203ENST00000376265 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
CACNA1F-203ENST00000376265 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
CACNA1F-203ENST00000376265 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
CACNA1F-203ENST00000376265 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
CACNA1F-203ENST00000376265 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
CACNA1F-203ENST00000376265 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.29
CACNA1F-203ENST00000376265 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.29
CACNA1F-203ENST00000376265 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.28
CACNA1F-203ENST00000376265 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
CACNA1F-203ENST00000376265 CCNB3Q8WWL7 1395 aa16.8■□□□□ 0.28
CACNA1F-203ENST00000376265 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
CACNA1F-203ENST00000376265 NBR1Q14596 966 aa16.77■□□□□ 0.28
CACNA1F-203ENST00000376265 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.28
CACNA1F-203ENST00000376265 KNSTRNQ9Y448 316 aa16.77■□□□□ 0.28
CACNA1F-203ENST00000376265 A0A0G2JS52 829 aa16.77■□□□□ 0.28
CACNA1F-203ENST00000376265 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
CACNA1F-203ENST00000376265 ANP32EQ9BTT0 268 aa16.74■□□□□ 0.27
CACNA1F-203ENST00000376265 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
CACNA1F-203ENST00000376265 CFAP53Q96M91 514 aa16.74■□□□□ 0.27
CACNA1F-203ENST00000376265 PPM1GO15355 546 aaPredicted RBP16.73■□□□□ 0.27
CACNA1F-203ENST00000376265 WIZO95785 1651 aa16.71■□□□□ 0.27
CACNA1F-203ENST00000376265 GLIPR1L2Q4G1C9 344 aa16.68■□□□□ 0.26
CACNA1F-203ENST00000376265 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
CACNA1F-203ENST00000376265 POGKQ9P215 609 aa16.67■□□□□ 0.26
CACNA1F-203ENST00000376265 ARXQ96QS3 562 aa16.66■□□□□ 0.26
CACNA1F-203ENST00000376265 SUPT16HQ9Y5B9 1047 aaKnown RBP16.66■□□□□ 0.26
CACNA1F-203ENST00000376265 VPS8Q8N3P4 1428 aa16.66■□□□□ 0.26
CACNA1F-203ENST00000376265 CC2D1BQ5T0F9 858 aaKnown RBP16.66■□□□□ 0.26
CACNA1F-203ENST00000376265 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
CACNA1F-203ENST00000376265 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
CACNA1F-203ENST00000376265 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
CACNA1F-203ENST00000376265 TNNT2P45379 298 aaPredicted RBP16.64■□□□□ 0.25
CACNA1F-203ENST00000376265 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
CACNA1F-203ENST00000376265 SETD5Q9C0A6 1442 aa16.63■□□□□ 0.25
CACNA1F-203ENST00000376265 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
CACNA1F-203ENST00000376265 KANK1Q14678 1352 aa16.62■□□□□ 0.25
CACNA1F-203ENST00000376265 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
CACNA1F-203ENST00000376265 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
CACNA1F-203ENST00000376265 MAPK8IP3Q9UPT6 1336 aa16.6■□□□□ 0.25
CACNA1F-203ENST00000376265 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
CACNA1F-203ENST00000376265 FTSJ3Q8IY81 847 aaKnown RBP16.59■□□□□ 0.25
CACNA1F-203ENST00000376265 TMF1P82094 1093 aa16.57■□□□□ 0.24
CACNA1F-203ENST00000376265 NUDCQ9Y266 331 aa16.57■□□□□ 0.24
CACNA1F-203ENST00000376265 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
CACNA1F-203ENST00000376265 MLECQ14165 292 aa16.56■□□□□ 0.24
CACNA1F-203ENST00000376265 FOXD1Q16676 465 aa16.56■□□□□ 0.24
CACNA1F-203ENST00000376265 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
CACNA1F-203ENST00000376265 LMOD2Q6P5Q4 547 aa16.55■□□□□ 0.24
CACNA1F-203ENST00000376265 BECN1Q14457 450 aa16.54■□□□□ 0.24
CACNA1F-203ENST00000376265 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
CACNA1F-203ENST00000376265 PKD2Q13563 968 aa16.52■□□□□ 0.24
CACNA1F-203ENST00000376265 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.23
CACNA1F-203ENST00000376265 FMN1Q68DA7 1419 aa16.51■□□□□ 0.23
CACNA1F-203ENST00000376265 FRAT1Q92837 279 aaPredicted RBP16.51■□□□□ 0.23
CACNA1F-203ENST00000376265 TIMELESSQ9UNS1 1208 aa16.49■□□□□ 0.23
CACNA1F-203ENST00000376265 SAFB2Q14151 953 aaKnown RBP eCLIP16.49■□□□□ 0.23
CACNA1F-203ENST00000376265 GGT6Q6P531 493 aa16.49■□□□□ 0.23
CACNA1F-203ENST00000376265 RAB3GAP2Q9H2M9 1393 aa16.49■□□□□ 0.23
CACNA1F-203ENST00000376265 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
CACNA1F-203ENST00000376265 SRPK2P78362 688 aaKnown RBP16.48■□□□□ 0.23
CACNA1F-203ENST00000376265 PPP4R2Q9NY27 417 aa16.47■□□□□ 0.23
CACNA1F-203ENST00000376265 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
CACNA1F-203ENST00000376265 RAPGEF2Q9Y4G8 1499 aa16.46■□□□□ 0.23
CACNA1F-203ENST00000376265 CASC1Q6TDU7 716 aa16.46■□□□□ 0.22
CACNA1F-203ENST00000376265 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
CACNA1F-203ENST00000376265 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
CACNA1F-203ENST00000376265 MPHOSPH9Q99550 1183 aa16.45■□□□□ 0.22
CACNA1F-203ENST00000376265 RGS3P49796 1198 aa16.44■□□□□ 0.22
CACNA1F-203ENST00000376265 STK26Q9P289 416 aa16.43■□□□□ 0.22
CACNA1F-203ENST00000376265 SOX12O15370 315 aa16.43■□□□□ 0.22
CACNA1F-203ENST00000376265 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
CACNA1F-203ENST00000376265 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
CACNA1F-203ENST00000376265 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
CACNA1F-203ENST00000376265 NCLP19338 710 aaKnown RBP16.42■□□□□ 0.22
CACNA1F-203ENST00000376265 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms