RNA–Protein interactions for RNA: ENST00000375398.6

SVIL-202, Transcript of supervillin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SVIL, Length 8,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-202ENST00000375398 MYH16Q9H6N6 1097 aa12.03□□□□□ -0.48
SVIL-202ENST00000375398 GOLGA6L6A8MZA4 724 aa12.01□□□□□ -0.49
SVIL-202ENST00000375398 PPM1GO15355 546 aaPredicted RBP12□□□□□ -0.49
SVIL-202ENST00000375398 TMC1Q8TDI8 760 aa12□□□□□ -0.49
SVIL-202ENST00000375398 NOP58Q9Y2X3 529 aaKnown RBP11.99□□□□□ -0.49
SVIL-202ENST00000375398 DRC7Q8IY82 874 aa11.98□□□□□ -0.49
SVIL-202ENST00000375398 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
SVIL-202ENST00000375398 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
SVIL-202ENST00000375398 NRDCO43847 1150 aa11.93□□□□□ -0.5
SVIL-202ENST00000375398 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
SVIL-202ENST00000375398 NOC3LQ8WTT2 800 aaKnown RBP11.93□□□□□ -0.5
SVIL-202ENST00000375398 A0A0G2JS52 829 aa11.92□□□□□ -0.5
SVIL-202ENST00000375398 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
SVIL-202ENST00000375398 SPRYD3Q8NCJ5 442 aa11.91□□□□□ -0.5
SVIL-202ENST00000375398 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
SVIL-202ENST00000375398 CLSTN1O94985 981 aa11.9□□□□□ -0.5
SVIL-202ENST00000375398 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
SVIL-202ENST00000375398 CASC1Q6TDU7 716 aa11.89□□□□□ -0.51
SVIL-202ENST00000375398 PTMSP20962 102 aa11.88□□□□□ -0.51
SVIL-202ENST00000375398 L1TD1Q5T7N2 865 aaKnown RBP11.88□□□□□ -0.51
SVIL-202ENST00000375398 HSP90AA2PQ14568 343 aaPredicted RBP11.87□□□□□ -0.51
SVIL-202ENST00000375398 MIER1Q8N108 512 aa11.86□□□□□ -0.51
SVIL-202ENST00000375398 PATL2C9JE40 543 aaKnown RBP11.86□□□□□ -0.51
SVIL-202ENST00000375398 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
SVIL-202ENST00000375398 PRM3Q9NNZ6 103 aa11.86□□□□□ -0.51
SVIL-202ENST00000375398 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
SVIL-202ENST00000375398 PDE4CQ08493 712 aa11.85□□□□□ -0.51
SVIL-202ENST00000375398 SETQ01105 290 aaPredicted RBP11.84□□□□□ -0.51
SVIL-202ENST00000375398 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
SVIL-202ENST00000375398 RGS3P49796 1198 aa11.84□□□□□ -0.51
SVIL-202ENST00000375398 PLPPR3Q6T4P5 718 aa11.84□□□□□ -0.51
SVIL-202ENST00000375398 GOLGA6L1Q8N7Z2 621 aa11.84□□□□□ -0.51
SVIL-202ENST00000375398 SUPT16HQ9Y5B9 1047 aaKnown RBP11.84□□□□□ -0.51
SVIL-202ENST00000375398 CHGAP10645 457 aaKnown RBP11.83□□□□□ -0.52
SVIL-202ENST00000375398 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
SVIL-202ENST00000375398 GOLGA6L4A6NEF3 574 aa11.82□□□□□ -0.52
SVIL-202ENST00000375398 TONSLQ96HA7 1378 aa11.82□□□□□ -0.52
SVIL-202ENST00000375398 APPP05067 770 aa11.82□□□□□ -0.52
SVIL-202ENST00000375398 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
SVIL-202ENST00000375398 ARID3CA6NKF2 412 aa11.82□□□□□ -0.52
SVIL-202ENST00000375398 FGD1P98174 961 aa11.8□□□□□ -0.52
SVIL-202ENST00000375398 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
SVIL-202ENST00000375398 KIAA2012Q0VF49 1180 aa11.79□□□□□ -0.52
SVIL-202ENST00000375398 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
SVIL-202ENST00000375398 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
SVIL-202ENST00000375398 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
SVIL-202ENST00000375398 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
SVIL-202ENST00000375398 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
SVIL-202ENST00000375398 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
SVIL-202ENST00000375398 ZNF771Q7L3S4 317 aaPredicted RBP11.75□□□□□ -0.53
SVIL-202ENST00000375398 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
SVIL-202ENST00000375398 HSCBQ8IWL3 235 aa11.75□□□□□ -0.53
SVIL-202ENST00000375398 KCNJ4P48050 445 aa11.74□□□□□ -0.53
SVIL-202ENST00000375398 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
SVIL-202ENST00000375398 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.53
SVIL-202ENST00000375398 PODXL2Q9NZ53 605 aa11.71□□□□□ -0.54
SVIL-202ENST00000375398 P3H3Q8IVL6 736 aa11.7□□□□□ -0.54
SVIL-202ENST00000375398 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
SVIL-202ENST00000375398 RBM19Q9Y4C8 960 aaKnown RBP11.67□□□□□ -0.54
SVIL-202ENST00000375398 FRAT1Q92837 279 aaPredicted RBP11.66□□□□□ -0.54
SVIL-202ENST00000375398 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
SVIL-202ENST00000375398 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
SVIL-202ENST00000375398 GNL2Q13823 731 aaKnown RBP11.65□□□□□ -0.54
SVIL-202ENST00000375398 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
SVIL-202ENST00000375398 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
SVIL-202ENST00000375398 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
SVIL-202ENST00000375398 GOLGA6L3A6NEY3 463 aa11.64□□□□□ -0.55
SVIL-202ENST00000375398 FBLN2P98095 1184 aa11.64□□□□□ -0.55
SVIL-202ENST00000375398 CREBRFQ8IUR6 639 aa11.64□□□□□ -0.55
SVIL-202ENST00000375398 NEUROD2Q15784 382 aa11.63□□□□□ -0.55
SVIL-202ENST00000375398 ESF1Q9H501 851 aaKnown RBP11.63□□□□□ -0.55
SVIL-202ENST00000375398 CCAR2Q8N163 923 aaKnown RBP11.62□□□□□ -0.55
SVIL-202ENST00000375398 RRP12Q5JTH9 1297 aaKnown RBP11.62□□□□□ -0.55
SVIL-202ENST00000375398 PKNOX2Q96KN3 472 aa11.61□□□□□ -0.55
SVIL-202ENST00000375398 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
SVIL-202ENST00000375398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.6□□□□□ -0.55
SVIL-202ENST00000375398 GBP4Q96PP9 640 aa11.6□□□□□ -0.55
SVIL-202ENST00000375398 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
SVIL-202ENST00000375398 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
SVIL-202ENST00000375398 FAM13BQ9NYF5 915 aa11.57□□□□□ -0.56
SVIL-202ENST00000375398 MCCP23508 829 aa11.57□□□□□ -0.56
SVIL-202ENST00000375398 TPM4P67936 248 aa11.57□□□□□ -0.56
SVIL-202ENST00000375398 NPHP1O15259 732 aa11.56□□□□□ -0.56
SVIL-202ENST00000375398 HSP90B1P14625 803 aaKnown RBP11.55□□□□□ -0.56
SVIL-202ENST00000375398 SYAP1Q96A49 352 aaPredicted RBP11.55□□□□□ -0.56
SVIL-202ENST00000375398 PLCD4Q9BRC7 762 aa11.55□□□□□ -0.56
SVIL-202ENST00000375398 MAP7D2Q96T17 732 aa11.54□□□□□ -0.56
SVIL-202ENST00000375398 ZNF592Q92610 1267 aa11.54□□□□□ -0.56
SVIL-202ENST00000375398 BCL11BQ9C0K0 894 aaPredicted RBP11.54□□□□□ -0.56
SVIL-202ENST00000375398 MEX3CQ5U5Q3 659 aaKnown RBP11.53□□□□□ -0.56
SVIL-202ENST00000375398 CHIC2Q9UKJ5 165 aa11.53□□□□□ -0.56
SVIL-202ENST00000375398 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
SVIL-202ENST00000375398 TPM3P06753 285 aa11.52□□□□□ -0.56
SVIL-202ENST00000375398 WWC1Q8IX03 1113 aa11.52□□□□□ -0.56
SVIL-202ENST00000375398 TEX35Q5T0J7 233 aa11.52□□□□□ -0.57
SVIL-202ENST00000375398 CEP89Q96ST8 783 aa11.51□□□□□ -0.57
SVIL-202ENST00000375398 APBB1O00213 710 aa11.51□□□□□ -0.57
SVIL-202ENST00000375398 GPS2Q13227 327 aa11.51□□□□□ -0.57
SVIL-202ENST00000375398 MAPK8IP2Q13387 824 aaPredicted RBP11.51□□□□□ -0.57
SVIL-202ENST00000375398 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms