RNA–Protein interactions for RNA: ENST00000373857.7

PTAFR-202, Transcript of platelet activating factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTAFR, Length 4,491 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFR-202ENST00000373857 CUX2O14529 1486 aa12.14□□□□□ -0.47
PTAFR-202ENST00000373857 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
PTAFR-202ENST00000373857 FAM9BQ8IZU0 186 aa12.12□□□□□ -0.47
PTAFR-202ENST00000373857 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
PTAFR-202ENST00000373857 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
PTAFR-202ENST00000373857 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
PTAFR-202ENST00000373857 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTAFR-202ENST00000373857 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
PTAFR-202ENST00000373857 HIRIP3Q9BW71 556 aaPredicted RBP12.09□□□□□ -0.47
PTAFR-202ENST00000373857 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
PTAFR-202ENST00000373857 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.47
PTAFR-202ENST00000373857 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTAFR-202ENST00000373857 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
PTAFR-202ENST00000373857 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
PTAFR-202ENST00000373857 SMARCA2P51531 1590 aa12.07□□□□□ -0.48
PTAFR-202ENST00000373857 CCDC88BA6NC98 1476 aa12.06□□□□□ -0.48
PTAFR-202ENST00000373857 TDRD9Q8NDG6 1382 aaKnown RBP12.06□□□□□ -0.48
PTAFR-202ENST00000373857 SOGA1O94964 1423 aa12.06□□□□□ -0.48
PTAFR-202ENST00000373857 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
PTAFR-202ENST00000373857 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTAFR-202ENST00000373857 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
PTAFR-202ENST00000373857 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
PTAFR-202ENST00000373857 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
PTAFR-202ENST00000373857 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
PTAFR-202ENST00000373857 A0A0G2JS52 829 aa11.99□□□□□ -0.49
PTAFR-202ENST00000373857 CADPSQ9ULU8 1353 aa11.99□□□□□ -0.49
PTAFR-202ENST00000373857 ZBTB7CA1YPR0 619 aa11.99□□□□□ -0.49
PTAFR-202ENST00000373857 MLECQ14165 292 aa11.97□□□□□ -0.49
PTAFR-202ENST00000373857 CARMIL2Q6F5E8 1435 aa11.97□□□□□ -0.49
PTAFR-202ENST00000373857 CARD11Q9BXL7 1154 aa11.96□□□□□ -0.5
PTAFR-202ENST00000373857 FKBP8Q14318 412 aa11.95□□□□□ -0.5
PTAFR-202ENST00000373857 CDCA8Q53HL2 280 aa11.95□□□□□ -0.5
PTAFR-202ENST00000373857 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
PTAFR-202ENST00000373857 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
PTAFR-202ENST00000373857 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
PTAFR-202ENST00000373857 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
PTAFR-202ENST00000373857 POGKQ9P215 609 aa11.93□□□□□ -0.5
PTAFR-202ENST00000373857 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
PTAFR-202ENST00000373857 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
PTAFR-202ENST00000373857 GGT6Q6P531 493 aa11.92□□□□□ -0.5
PTAFR-202ENST00000373857 KNSTRNQ9Y448 316 aa11.9□□□□□ -0.5
PTAFR-202ENST00000373857 ANP32AP39687 249 aaKnown RBP11.9□□□□□ -0.5
PTAFR-202ENST00000373857 AEBP2Q6ZN18 517 aaPredicted RBP11.9□□□□□ -0.5
PTAFR-202ENST00000373857 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.51
PTAFR-202ENST00000373857 MIER1Q8N108 512 aa11.9□□□□□ -0.51
PTAFR-202ENST00000373857 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
PTAFR-202ENST00000373857 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
PTAFR-202ENST00000373857 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
PTAFR-202ENST00000373857 KANK1Q14678 1352 aa11.88□□□□□ -0.51
PTAFR-202ENST00000373857 TOP2AP11388 1531 aaKnown RBP11.88□□□□□ -0.51
PTAFR-202ENST00000373857 WIZO95785 1651 aa11.87□□□□□ -0.51
PTAFR-202ENST00000373857 VPS8Q8N3P4 1428 aa11.87□□□□□ -0.51
PTAFR-202ENST00000373857 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
PTAFR-202ENST00000373857 CCDC136Q96JN2 1154 aa11.87□□□□□ -0.51
PTAFR-202ENST00000373857 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
PTAFR-202ENST00000373857 DCAF11Q8TEB1 546 aa11.86□□□□□ -0.51
PTAFR-202ENST00000373857 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
PTAFR-202ENST00000373857 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
PTAFR-202ENST00000373857 UPF2Q9HAU5 1272 aaKnown RBP11.84□□□□□ -0.51
PTAFR-202ENST00000373857 HSP90AA1P07900 732 aaKnown RBP11.83□□□□□ -0.52
PTAFR-202ENST00000373857 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
PTAFR-202ENST00000373857 PKD2Q13563 968 aa11.82□□□□□ -0.52
PTAFR-202ENST00000373857 ARHGAP35Q9NRY4 1499 aa11.81□□□□□ -0.52
PTAFR-202ENST00000373857 TNNT2P45379 298 aaPredicted RBP11.79□□□□□ -0.52
PTAFR-202ENST00000373857 FANCD2Q9BXW9 1451 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 MYH16Q9H6N6 1097 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 NUDCQ9Y266 331 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 IRX6P78412 446 aaPredicted RBP11.78□□□□□ -0.52
PTAFR-202ENST00000373857 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTAFR-202ENST00000373857 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
PTAFR-202ENST00000373857 KIF3BO15066 747 aa11.77□□□□□ -0.52
PTAFR-202ENST00000373857 TMF1P82094 1093 aa11.77□□□□□ -0.52
PTAFR-202ENST00000373857 FHOD3Q2V2M9 1422 aa11.77□□□□□ -0.53
PTAFR-202ENST00000373857 FOXD1Q16676 465 aa11.77□□□□□ -0.53
PTAFR-202ENST00000373857 ARXQ96QS3 562 aa11.77□□□□□ -0.53
PTAFR-202ENST00000373857 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 SRPK2P78362 688 aaKnown RBP11.76□□□□□ -0.53
PTAFR-202ENST00000373857 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 CYB5RLQ6IPT4 315 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 NUP155O75694 1391 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 HNRNPMP52272 730 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTAFR-202ENST00000373857 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 STK26Q9P289 416 aa11.75□□□□□ -0.53
PTAFR-202ENST00000373857 ANKRD30AQ9BXX3 1397 aa11.74□□□□□ -0.53
PTAFR-202ENST00000373857 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
PTAFR-202ENST00000373857 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
PTAFR-202ENST00000373857 OSCARQ8IYS5 282 aa11.74□□□□□ -0.53
PTAFR-202ENST00000373857 U2SURPO15042 1029 aaKnown RBP11.73□□□□□ -0.53
PTAFR-202ENST00000373857 SOX12O15370 315 aa11.73□□□□□ -0.53
PTAFR-202ENST00000373857 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
PTAFR-202ENST00000373857 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
PTAFR-202ENST00000373857 MPHOSPH9Q99550 1183 aa11.72□□□□□ -0.53
PTAFR-202ENST00000373857 PTPRGP23470 1445 aa11.7□□□□□ -0.54
PTAFR-202ENST00000373857 WASHC2CQ9Y4E1 1318 aa11.69□□□□□ -0.54
PTAFR-202ENST00000373857 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
PTAFR-202ENST00000373857 CCDC18Q5T9S5 1454 aa11.67□□□□□ -0.54
PTAFR-202ENST00000373857 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
PTAFR-202ENST00000373857 FTSJ3Q8IY81 847 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms