RNA–Protein interactions for RNA: ENST00000373857.7

PTAFR-202, Transcript of platelet activating factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTAFR, Length 4,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFR-202ENST00000373857 CUX2O14529 1486 aa12.14□□□□□ -0.47
PTAFR-202ENST00000373857 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
PTAFR-202ENST00000373857 FAM9BQ8IZU0 186 aa12.12□□□□□ -0.47
PTAFR-202ENST00000373857 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
PTAFR-202ENST00000373857 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
PTAFR-202ENST00000373857 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
PTAFR-202ENST00000373857 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTAFR-202ENST00000373857 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
PTAFR-202ENST00000373857 HIRIP3Q9BW71 556 aaPredicted RBP12.09□□□□□ -0.47
PTAFR-202ENST00000373857 SCAF1Q9H7N4 1312 aaKnown RBP12.09□□□□□ -0.47
PTAFR-202ENST00000373857 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.47
PTAFR-202ENST00000373857 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTAFR-202ENST00000373857 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
PTAFR-202ENST00000373857 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
PTAFR-202ENST00000373857 SMARCA2P51531 1590 aa12.07□□□□□ -0.48
PTAFR-202ENST00000373857 CCDC88BA6NC98 1476 aa12.06□□□□□ -0.48
PTAFR-202ENST00000373857 TDRD9Q8NDG6 1382 aaKnown RBP12.06□□□□□ -0.48
PTAFR-202ENST00000373857 SOGA1O94964 1423 aa12.06□□□□□ -0.48
PTAFR-202ENST00000373857 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
PTAFR-202ENST00000373857 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTAFR-202ENST00000373857 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
PTAFR-202ENST00000373857 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
PTAFR-202ENST00000373857 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
PTAFR-202ENST00000373857 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
PTAFR-202ENST00000373857 A0A0G2JS52 829 aa11.99□□□□□ -0.49
PTAFR-202ENST00000373857 CADPSQ9ULU8 1353 aa11.99□□□□□ -0.49
PTAFR-202ENST00000373857 ZBTB7CA1YPR0 619 aa11.99□□□□□ -0.49
PTAFR-202ENST00000373857 MLECQ14165 292 aa11.97□□□□□ -0.49
PTAFR-202ENST00000373857 CARMIL2Q6F5E8 1435 aa11.97□□□□□ -0.49
PTAFR-202ENST00000373857 CARD11Q9BXL7 1154 aa11.96□□□□□ -0.5
PTAFR-202ENST00000373857 FKBP8Q14318 412 aa11.95□□□□□ -0.5
PTAFR-202ENST00000373857 CDCA8Q53HL2 280 aa11.95□□□□□ -0.5
PTAFR-202ENST00000373857 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
PTAFR-202ENST00000373857 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
PTAFR-202ENST00000373857 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
PTAFR-202ENST00000373857 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
PTAFR-202ENST00000373857 POGKQ9P215 609 aa11.93□□□□□ -0.5
PTAFR-202ENST00000373857 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
PTAFR-202ENST00000373857 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
PTAFR-202ENST00000373857 GGT6Q6P531 493 aa11.92□□□□□ -0.5
PTAFR-202ENST00000373857 KNSTRNQ9Y448 316 aa11.9□□□□□ -0.5
PTAFR-202ENST00000373857 ANP32AP39687 249 aaKnown RBP11.9□□□□□ -0.5
PTAFR-202ENST00000373857 AEBP2Q6ZN18 517 aaPredicted RBP11.9□□□□□ -0.5
PTAFR-202ENST00000373857 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.51
PTAFR-202ENST00000373857 MIER1Q8N108 512 aa11.9□□□□□ -0.51
PTAFR-202ENST00000373857 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
PTAFR-202ENST00000373857 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
PTAFR-202ENST00000373857 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
PTAFR-202ENST00000373857 KANK1Q14678 1352 aa11.88□□□□□ -0.51
PTAFR-202ENST00000373857 TOP2AP11388 1531 aaKnown RBP11.88□□□□□ -0.51
PTAFR-202ENST00000373857 WIZO95785 1651 aa11.87□□□□□ -0.51
PTAFR-202ENST00000373857 VPS8Q8N3P4 1428 aa11.87□□□□□ -0.51
PTAFR-202ENST00000373857 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
PTAFR-202ENST00000373857 CCDC136Q96JN2 1154 aa11.87□□□□□ -0.51
PTAFR-202ENST00000373857 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
PTAFR-202ENST00000373857 DCAF11Q8TEB1 546 aa11.86□□□□□ -0.51
PTAFR-202ENST00000373857 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
PTAFR-202ENST00000373857 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
PTAFR-202ENST00000373857 UPF2Q9HAU5 1272 aaKnown RBP11.84□□□□□ -0.51
PTAFR-202ENST00000373857 HSP90AA1P07900 732 aaKnown RBP11.83□□□□□ -0.52
PTAFR-202ENST00000373857 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
PTAFR-202ENST00000373857 PKD2Q13563 968 aa11.82□□□□□ -0.52
PTAFR-202ENST00000373857 ARHGAP35Q9NRY4 1499 aa11.81□□□□□ -0.52
PTAFR-202ENST00000373857 TNNT2P45379 298 aaPredicted RBP11.79□□□□□ -0.52
PTAFR-202ENST00000373857 FANCD2Q9BXW9 1451 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 MYH16Q9H6N6 1097 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 NUDCQ9Y266 331 aa11.79□□□□□ -0.52
PTAFR-202ENST00000373857 IRX6P78412 446 aaPredicted RBP11.78□□□□□ -0.52
PTAFR-202ENST00000373857 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTAFR-202ENST00000373857 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
PTAFR-202ENST00000373857 KIF3BO15066 747 aa11.77□□□□□ -0.52
PTAFR-202ENST00000373857 TMF1P82094 1093 aa11.77□□□□□ -0.52
PTAFR-202ENST00000373857 FHOD3Q2V2M9 1422 aa11.77□□□□□ -0.53
PTAFR-202ENST00000373857 FOXD1Q16676 465 aa11.77□□□□□ -0.53
PTAFR-202ENST00000373857 ARXQ96QS3 562 aa11.77□□□□□ -0.53
PTAFR-202ENST00000373857 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 SRPK2P78362 688 aaKnown RBP11.76□□□□□ -0.53
PTAFR-202ENST00000373857 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 CYB5RLQ6IPT4 315 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 NUP155O75694 1391 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 HNRNPMP52272 730 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTAFR-202ENST00000373857 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
PTAFR-202ENST00000373857 STK26Q9P289 416 aa11.75□□□□□ -0.53
PTAFR-202ENST00000373857 ANKRD30AQ9BXX3 1397 aa11.74□□□□□ -0.53
PTAFR-202ENST00000373857 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
PTAFR-202ENST00000373857 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
PTAFR-202ENST00000373857 OSCARQ8IYS5 282 aa11.74□□□□□ -0.53
PTAFR-202ENST00000373857 U2SURPO15042 1029 aaKnown RBP11.73□□□□□ -0.53
PTAFR-202ENST00000373857 SOX12O15370 315 aa11.73□□□□□ -0.53
PTAFR-202ENST00000373857 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
PTAFR-202ENST00000373857 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
PTAFR-202ENST00000373857 MPHOSPH9Q99550 1183 aa11.72□□□□□ -0.53
PTAFR-202ENST00000373857 PTPRGP23470 1445 aa11.7□□□□□ -0.54
PTAFR-202ENST00000373857 WASHC2CQ9Y4E1 1318 aa11.69□□□□□ -0.54
PTAFR-202ENST00000373857 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
PTAFR-202ENST00000373857 CCDC18Q5T9S5 1454 aa11.67□□□□□ -0.54
PTAFR-202ENST00000373857 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
PTAFR-202ENST00000373857 FTSJ3Q8IY81 847 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms