RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 DNTTIP2Q5QJE6 756 aaKnown RBP11.92□□□□□ -0.5
CSMD2-205ENST00000373381 FGD1P98174 961 aa11.92□□□□□ -0.5
CSMD2-205ENST00000373381 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
CSMD2-205ENST00000373381 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
CSMD2-205ENST00000373381 CCDC136Q96JN2 1154 aa11.91□□□□□ -0.5
CSMD2-205ENST00000373381 TONSLQ96HA7 1378 aa11.9□□□□□ -0.5
CSMD2-205ENST00000373381 LOC105371045A0A1W2PR82 267 aa11.89□□□□□ -0.51
CSMD2-205ENST00000373381 CHAF1AQ13111 956 aaPredicted RBP11.89□□□□□ -0.51
CSMD2-205ENST00000373381 P3H3Q8IVL6 736 aa11.88□□□□□ -0.51
CSMD2-205ENST00000373381 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSMD2-205ENST00000373381 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
CSMD2-205ENST00000373381 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
CSMD2-205ENST00000373381 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
CSMD2-205ENST00000373381 NOC3LQ8WTT2 800 aaKnown RBP11.85□□□□□ -0.51
CSMD2-205ENST00000373381 TAOK2Q9UL54 1235 aa11.84□□□□□ -0.51
CSMD2-205ENST00000373381 OS9Q13438 667 aaPredicted RBP11.84□□□□□ -0.51
CSMD2-205ENST00000373381 DDRGK1Q96HY6 314 aa11.84□□□□□ -0.51
CSMD2-205ENST00000373381 CFAP53Q96M91 514 aa11.83□□□□□ -0.52
CSMD2-205ENST00000373381 NAP1L2Q9ULW6 460 aaPredicted RBP11.83□□□□□ -0.52
CSMD2-205ENST00000373381 KCNJ4P48050 445 aa11.82□□□□□ -0.52
CSMD2-205ENST00000373381 FAM9BQ8IZU0 186 aa11.82□□□□□ -0.52
CSMD2-205ENST00000373381 NBR1Q14596 966 aa11.82□□□□□ -0.52
CSMD2-205ENST00000373381 PNNQ9H307 717 aaKnown RBP11.82□□□□□ -0.52
CSMD2-205ENST00000373381 HNRNPUQ00839 825 aaKnown RBP eCLIP11.81□□□□□ -0.52
CSMD2-205ENST00000373381 TSPY4P0CV99 314 aa11.81□□□□□ -0.52
CSMD2-205ENST00000373381 TSPY10P0CW01 314 aa11.81□□□□□ -0.52
CSMD2-205ENST00000373381 FTSJ3Q8IY81 847 aaKnown RBP11.81□□□□□ -0.52
CSMD2-205ENST00000373381 TPRNQ4KMQ1 711 aa11.81□□□□□ -0.52
CSMD2-205ENST00000373381 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
CSMD2-205ENST00000373381 PPM1GO15355 546 aaPredicted RBP11.78□□□□□ -0.52
CSMD2-205ENST00000373381 GNL2Q13823 731 aaKnown RBP11.77□□□□□ -0.53
CSMD2-205ENST00000373381 GOLGA6L4A6NEF3 574 aa11.76□□□□□ -0.53
CSMD2-205ENST00000373381 CDCA8Q53HL2 280 aa11.75□□□□□ -0.53
CSMD2-205ENST00000373381 SENP3Q9H4L4 574 aaPredicted RBP11.75□□□□□ -0.53
CSMD2-205ENST00000373381 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
CSMD2-205ENST00000373381 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
CSMD2-205ENST00000373381 FKBP8Q14318 412 aa11.73□□□□□ -0.53
CSMD2-205ENST00000373381 A0A0U1RQG5 324 aaPredicted RBP11.72□□□□□ -0.53
CSMD2-205ENST00000373381 MAPK8IP3Q9UPT6 1336 aa11.71□□□□□ -0.54
CSMD2-205ENST00000373381 G3V3G9 751 aa11.71□□□□□ -0.54
CSMD2-205ENST00000373381 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.54
CSMD2-205ENST00000373381 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
CSMD2-205ENST00000373381 MRS2Q9HD23 443 aa11.69□□□□□ -0.54
CSMD2-205ENST00000373381 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
CSMD2-205ENST00000373381 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
CSMD2-205ENST00000373381 USP35Q9P2H5 1018 aa11.68□□□□□ -0.54
CSMD2-205ENST00000373381 MCCP23508 829 aa11.67□□□□□ -0.54
CSMD2-205ENST00000373381 CCDC34Q96HJ3 373 aa11.67□□□□□ -0.54
CSMD2-205ENST00000373381 CEP89Q96ST8 783 aa11.66□□□□□ -0.54
CSMD2-205ENST00000373381 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
CSMD2-205ENST00000373381 DRC7Q8IY82 874 aa11.66□□□□□ -0.54
CSMD2-205ENST00000373381 KNSTRNQ9Y448 316 aa11.66□□□□□ -0.54
CSMD2-205ENST00000373381 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
CSMD2-205ENST00000373381 HDGFP51858 240 aaKnown RBP11.66□□□□□ -0.54
CSMD2-205ENST00000373381 ACIN1Q9UKV3 1341 aaKnown RBP11.66□□□□□ -0.54
CSMD2-205ENST00000373381 POGKQ9P215 609 aa11.66□□□□□ -0.54
CSMD2-205ENST00000373381 ABCC9O60706 1549 aa11.66□□□□□ -0.54
CSMD2-205ENST00000373381 MS4A1P11836 297 aa11.65□□□□□ -0.54
CSMD2-205ENST00000373381 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
CSMD2-205ENST00000373381 HSP90AB1P08238 724 aaKnown RBP11.63□□□□□ -0.55
CSMD2-205ENST00000373381 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
CSMD2-205ENST00000373381 NAP1L5Q96NT1 182 aaPredicted RBP11.61□□□□□ -0.55
CSMD2-205ENST00000373381 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
CSMD2-205ENST00000373381 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
CSMD2-205ENST00000373381 KIAA1211Q6ZU35 1233 aa11.61□□□□□ -0.55
CSMD2-205ENST00000373381 KAT6BQ8WYB5 2073 aa11.61□□□□□ -0.55
CSMD2-205ENST00000373381 GOLGA6L1Q8N7Z2 621 aa11.59□□□□□ -0.55
CSMD2-205ENST00000373381 DDX10Q13206 875 aaKnown RBP11.59□□□□□ -0.55
CSMD2-205ENST00000373381 KCNH8Q96L42 1107 aa11.59□□□□□ -0.55
CSMD2-205ENST00000373381 PDE4CQ08493 712 aa11.59□□□□□ -0.55
CSMD2-205ENST00000373381 HTATSF1O43719 755 aaKnown RBP11.59□□□□□ -0.55
CSMD2-205ENST00000373381 VPS53Q5VIR6 699 aa11.59□□□□□ -0.55
CSMD2-205ENST00000373381 TCEAL9Q9UHQ7 104 aa11.58□□□□□ -0.56
CSMD2-205ENST00000373381 TPM4P67936 248 aa11.58□□□□□ -0.56
CSMD2-205ENST00000373381 MTUS2Q5JR59 1369 aa11.57□□□□□ -0.56
CSMD2-205ENST00000373381 CCDC9Q9Y3X0 531 aaKnown RBP11.56□□□□□ -0.56
CSMD2-205ENST00000373381 MSNP26038 577 aaKnown RBP11.56□□□□□ -0.56
CSMD2-205ENST00000373381 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
CSMD2-205ENST00000373381 CHMP4AQ9BY43 222 aa11.55□□□□□ -0.56
CSMD2-205ENST00000373381 RASSF8Q8NHQ8 419 aa11.55□□□□□ -0.56
CSMD2-205ENST00000373381 GPATCH3Q96I76 525 aa11.55□□□□□ -0.56
CSMD2-205ENST00000373381 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-205ENST00000373381 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
CSMD2-205ENST00000373381 MARCH6O60337 910 aa11.52□□□□□ -0.56
CSMD2-205ENST00000373381 CSB-PGBD3P0DP91 1061 aa11.52□□□□□ -0.57
CSMD2-205ENST00000373381 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.57
CSMD2-205ENST00000373381 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
CSMD2-205ENST00000373381 CTDP1Q9Y5B0 961 aaPredicted RBP11.51□□□□□ -0.57
CSMD2-205ENST00000373381 GORABQ5T7V8 394 aa11.51□□□□□ -0.57
CSMD2-205ENST00000373381 CWC22Q9HCG8 908 aaKnown RBP11.51□□□□□ -0.57
CSMD2-205ENST00000373381 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
CSMD2-205ENST00000373381 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
CSMD2-205ENST00000373381 TNNT3P45378 269 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-205ENST00000373381 CSRNP3Q8WYN3 585 aa11.49□□□□□ -0.57
CSMD2-205ENST00000373381 FRAT2O75474 233 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-205ENST00000373381 TPM3P06753 285 aa11.49□□□□□ -0.57
CSMD2-205ENST00000373381 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
CSMD2-205ENST00000373381 U2SURPO15042 1029 aaKnown RBP11.48□□□□□ -0.57
CSMD2-205ENST00000373381 KANK1Q14678 1352 aa11.48□□□□□ -0.57
CSMD2-205ENST00000373381 TRIM34Q9BYJ4 488 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms