RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CEP162Q5TB80 1403 aa14.58□□□□□ -0.08
TRERF1-203ENST00000372917 IPO9Q96P70 1041 aaKnown RBP14.58□□□□□ -0.08
TRERF1-203ENST00000372917 WASHC2AQ641Q2 1341 aa14.54□□□□□ -0.08
TRERF1-203ENST00000372917 CECR2Q9BXF3 1484 aa14.51□□□□□ -0.09
TRERF1-203ENST00000372917 WASHC2CQ9Y4E1 1318 aa14.51□□□□□ -0.09
TRERF1-203ENST00000372917 TNIKQ9UKE5 1360 aa14.51□□□□□ -0.09
TRERF1-203ENST00000372917 B4GALNT3Q6L9W6 998 aa14.51□□□□□ -0.09
TRERF1-203ENST00000372917 NPM2Q86SE8 214 aaKnown RBP14.5□□□□□ -0.09
TRERF1-203ENST00000372917 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
TRERF1-203ENST00000372917 ATP1B4Q9UN42 357 aaPredicted RBP14.49□□□□□ -0.09
TRERF1-203ENST00000372917 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
TRERF1-203ENST00000372917 NAP1L5Q96NT1 182 aaPredicted RBP14.48□□□□□ -0.09
TRERF1-203ENST00000372917 PPP4R2Q9NY27 417 aa14.47□□□□□ -0.09
TRERF1-203ENST00000372917 HSP90AA1P07900 732 aaKnown RBP14.47□□□□□ -0.09
TRERF1-203ENST00000372917 GSE1Q14687 1217 aa14.47□□□□□ -0.09
TRERF1-203ENST00000372917 FAM43AQ8N2R8 423 aa14.46□□□□□ -0.09
TRERF1-203ENST00000372917 USP35Q9P2H5 1018 aa14.46□□□□□ -0.09
TRERF1-203ENST00000372917 EEA1Q15075 1411 aa14.45□□□□□ -0.1
TRERF1-203ENST00000372917 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
TRERF1-203ENST00000372917 DDX10Q13206 875 aaKnown RBP14.44□□□□□ -0.1
TRERF1-203ENST00000372917 RRP9O43818 475 aaKnown RBP14.43□□□□□ -0.1
TRERF1-203ENST00000372917 WIZO95785 1651 aa14.42□□□□□ -0.1
TRERF1-203ENST00000372917 NACADO15069 1562 aa14.4□□□□□ -0.1
TRERF1-203ENST00000372917 TAF7LQ5H9L4 462 aa14.39□□□□□ -0.11
TRERF1-203ENST00000372917 FRAT1Q92837 279 aaPredicted RBP14.38□□□□□ -0.11
TRERF1-203ENST00000372917 ARID4BQ4LE39 1312 aaPredicted RBP14.38□□□□□ -0.11
TRERF1-203ENST00000372917 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
TRERF1-203ENST00000372917 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
TRERF1-203ENST00000372917 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
TRERF1-203ENST00000372917 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
TRERF1-203ENST00000372917 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
TRERF1-203ENST00000372917 HNRNPUQ00839 825 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRERF1-203ENST00000372917 RGS3P49796 1198 aa14.35□□□□□ -0.11
TRERF1-203ENST00000372917 SOGA1O94964 1423 aa14.35□□□□□ -0.11
TRERF1-203ENST00000372917 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
TRERF1-203ENST00000372917 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
TRERF1-203ENST00000372917 ANP32CO43423 234 aa14.31□□□□□ -0.12
TRERF1-203ENST00000372917 CHMP4BQ9H444 224 aaKnown RBP14.3□□□□□ -0.12
TRERF1-203ENST00000372917 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
TRERF1-203ENST00000372917 PNNQ9H307 717 aaKnown RBP14.29□□□□□ -0.12
TRERF1-203ENST00000372917 CLIP1P30622 1438 aa14.27□□□□□ -0.12
TRERF1-203ENST00000372917 RRAGDQ9NQL2 400 aaPredicted RBP14.27□□□□□ -0.13
TRERF1-203ENST00000372917 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
TRERF1-203ENST00000372917 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
TRERF1-203ENST00000372917 TOP2AP11388 1531 aaKnown RBP14.23□□□□□ -0.13
TRERF1-203ENST00000372917 NFKBIBQ15653 356 aa14.22□□□□□ -0.13
TRERF1-203ENST00000372917 EIF4G1Q04637 1599 aaKnown RBP14.21□□□□□ -0.13
TRERF1-203ENST00000372917 CCER2I3L3R5 266 aa14.21□□□□□ -0.14
TRERF1-203ENST00000372917 VPS8Q8N3P4 1428 aa14.2□□□□□ -0.14
TRERF1-203ENST00000372917 SIN3AQ96ST3 1273 aa14.19□□□□□ -0.14
TRERF1-203ENST00000372917 ARXQ96QS3 562 aa14.19□□□□□ -0.14
TRERF1-203ENST00000372917 PRDM4Q9UKN5 801 aa14.18□□□□□ -0.14
TRERF1-203ENST00000372917 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
TRERF1-203ENST00000372917 CANXP27824 592 aaKnown RBP14.18□□□□□ -0.14
TRERF1-203ENST00000372917 CALD1Q05682 793 aaKnown RBP14.17□□□□□ -0.14
TRERF1-203ENST00000372917 HIRIP3Q9BW71 556 aaPredicted RBP14.16□□□□□ -0.14
TRERF1-203ENST00000372917 CNGB1Q14028 1251 aaPredicted RBP14.16□□□□□ -0.14
TRERF1-203ENST00000372917 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
TRERF1-203ENST00000372917 DHX37Q8IY37 1157 aaKnown RBP14.12□□□□□ -0.15
TRERF1-203ENST00000372917 SMARCA2P51531 1590 aa14.12□□□□□ -0.15
TRERF1-203ENST00000372917 FAM50AQ14320 339 aaKnown RBP14.12□□□□□ -0.15
TRERF1-203ENST00000372917 GTF2E1P29083 439 aaPredicted RBP14.12□□□□□ -0.15
TRERF1-203ENST00000372917 SLC4A3P48751 1232 aa14.11□□□□□ -0.15
TRERF1-203ENST00000372917 DHX57Q6P158 1386 aaKnown RBP14.1□□□□□ -0.15
TRERF1-203ENST00000372917 PDCL3Q9H2J4 239 aa14.1□□□□□ -0.15
TRERF1-203ENST00000372917 ZHX1Q9UKY1 873 aaPredicted RBP14.09□□□□□ -0.15
TRERF1-203ENST00000372917 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
TRERF1-203ENST00000372917 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
TRERF1-203ENST00000372917 NCBP3Q53F19 620 aaKnown RBP14.08□□□□□ -0.16
TRERF1-203ENST00000372917 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
TRERF1-203ENST00000372917 SMARCA4P51532 1647 aa14.06□□□□□ -0.16
TRERF1-203ENST00000372917 FRAT2O75474 233 aaPredicted RBP14.06□□□□□ -0.16
TRERF1-203ENST00000372917 STAC3Q96MF2 364 aa14.06□□□□□ -0.16
TRERF1-203ENST00000372917 IPO4Q8TEX9 1081 aaKnown RBP14.05□□□□□ -0.16
TRERF1-203ENST00000372917 ARID3AQ99856 593 aa14.05□□□□□ -0.16
TRERF1-203ENST00000372917 KIF21BO75037 1637 aa14.05□□□□□ -0.16
TRERF1-203ENST00000372917 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
TRERF1-203ENST00000372917 DDRGK1Q96HY6 314 aa14.04□□□□□ -0.16
TRERF1-203ENST00000372917 PDE4AP27815 886 aa14.02□□□□□ -0.16
TRERF1-203ENST00000372917 CLCN1P35523 988 aa14.02□□□□□ -0.17
TRERF1-203ENST00000372917 POLR3GLQ9BT43 218 aa14.01□□□□□ -0.17
TRERF1-203ENST00000372917 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
TRERF1-203ENST00000372917 VGLL3A8MV65 326 aa13.99□□□□□ -0.17
TRERF1-203ENST00000372917 L1TD1Q5T7N2 865 aaKnown RBP13.99□□□□□ -0.17
TRERF1-203ENST00000372917 P3H3Q8IVL6 736 aa13.99□□□□□ -0.17
TRERF1-203ENST00000372917 NCLP19338 710 aaKnown RBP13.97□□□□□ -0.17
TRERF1-203ENST00000372917 FOXD1Q16676 465 aa13.97□□□□□ -0.17
TRERF1-203ENST00000372917 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
TRERF1-203ENST00000372917 RAPGEF2Q9Y4G8 1499 aa13.97□□□□□ -0.17
TRERF1-203ENST00000372917 FAM9BQ8IZU0 186 aa13.97□□□□□ -0.17
TRERF1-203ENST00000372917 CENPJQ9HC77 1338 aaPredicted RBP13.97□□□□□ -0.17
TRERF1-203ENST00000372917 CHMP4AQ9BY43 222 aa13.96□□□□□ -0.17
TRERF1-203ENST00000372917 POGKQ9P215 609 aa13.95□□□□□ -0.18
TRERF1-203ENST00000372917 TPM2P07951 284 aa13.95□□□□□ -0.18
TRERF1-203ENST00000372917 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
TRERF1-203ENST00000372917 BRD2P25440 801 aaKnown RBP13.94□□□□□ -0.18
TRERF1-203ENST00000372917 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
TRERF1-203ENST00000372917 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
TRERF1-203ENST00000372917 ANP32BQ92688 251 aaKnown RBP13.92□□□□□ -0.18
TRERF1-203ENST00000372917 FAM13BQ9NYF5 915 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms