RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ZRSR1Q15695 479 aaKnown RBP16.4■□□□□ 0.22
HCFC1-202ENST00000369984 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
HCFC1-202ENST00000369984 KDM2AQ9Y2K7 1162 aa16.38■□□□□ 0.21
HCFC1-202ENST00000369984 A0A0G2JS52 829 aa16.36■□□□□ 0.21
HCFC1-202ENST00000369984 TPRNQ4KMQ1 711 aa16.35■□□□□ 0.21
HCFC1-202ENST00000369984 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
HCFC1-202ENST00000369984 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.21
HCFC1-202ENST00000369984 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
HCFC1-202ENST00000369984 MIER1Q8N108 512 aa16.32■□□□□ 0.2
HCFC1-202ENST00000369984 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
HCFC1-202ENST00000369984 TULP1O00294 542 aaPredicted RBP16.28■□□□□ 0.2
HCFC1-202ENST00000369984 ERICH6BQ5W0A0 696 aa16.28■□□□□ 0.2
HCFC1-202ENST00000369984 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.19
HCFC1-202ENST00000369984 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
HCFC1-202ENST00000369984 C14orf37Q86TY3 774 aa16.23■□□□□ 0.19
HCFC1-202ENST00000369984 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
HCFC1-202ENST00000369984 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
HCFC1-202ENST00000369984 EIF4G2P78344 907 aaKnown RBP eCLIP16.22■□□□□ 0.19
HCFC1-202ENST00000369984 GOLGA6L6A8MZA4 724 aa16.2■□□□□ 0.18
HCFC1-202ENST00000369984 PPM1GO15355 546 aaPredicted RBP16.2■□□□□ 0.18
HCFC1-202ENST00000369984 PLCB2Q00722 1185 aa16.2■□□□□ 0.18
HCFC1-202ENST00000369984 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
HCFC1-202ENST00000369984 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
HCFC1-202ENST00000369984 SENP3Q9H4L4 574 aaPredicted RBP16.18■□□□□ 0.18
HCFC1-202ENST00000369984 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
HCFC1-202ENST00000369984 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
HCFC1-202ENST00000369984 ARID4BQ4LE39 1312 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-202ENST00000369984 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
HCFC1-202ENST00000369984 SUPT16HQ9Y5B9 1047 aaKnown RBP16.16■□□□□ 0.18
HCFC1-202ENST00000369984 HSP90AB1P08238 724 aaKnown RBP16.14■□□□□ 0.17
HCFC1-202ENST00000369984 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
HCFC1-202ENST00000369984 NOP58Q9Y2X3 529 aaKnown RBP16.14■□□□□ 0.17
HCFC1-202ENST00000369984 SENP3-EIF4A1A0A087X0R7 540 aa16.13■□□□□ 0.17
HCFC1-202ENST00000369984 CHAF1AQ13111 956 aaPredicted RBP16.12■□□□□ 0.17
HCFC1-202ENST00000369984 CFAP53Q96M91 514 aa16.12■□□□□ 0.17
HCFC1-202ENST00000369984 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
HCFC1-202ENST00000369984 KNSTRNQ9Y448 316 aa16.1■□□□□ 0.17
HCFC1-202ENST00000369984 NRDCO43847 1150 aa16.09■□□□□ 0.17
HCFC1-202ENST00000369984 PPP1R15AO75807 674 aaPredicted RBP16.08■□□□□ 0.17
HCFC1-202ENST00000369984 ARID3AQ99856 593 aa16.08■□□□□ 0.16
HCFC1-202ENST00000369984 TNNT3P45378 269 aaPredicted RBP16.07■□□□□ 0.16
HCFC1-202ENST00000369984 MSNP26038 577 aaKnown RBP16.07■□□□□ 0.16
HCFC1-202ENST00000369984 RGS3P49796 1198 aa16.07■□□□□ 0.16
HCFC1-202ENST00000369984 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
HCFC1-202ENST00000369984 FGD1P98174 961 aa16.06■□□□□ 0.16
HCFC1-202ENST00000369984 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
HCFC1-202ENST00000369984 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
HCFC1-202ENST00000369984 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.16
HCFC1-202ENST00000369984 CDCA8Q53HL2 280 aa16.02■□□□□ 0.16
HCFC1-202ENST00000369984 KCNJ4P48050 445 aa16.02■□□□□ 0.16
HCFC1-202ENST00000369984 DRC7Q8IY82 874 aa16.02■□□□□ 0.16
HCFC1-202ENST00000369984 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
HCFC1-202ENST00000369984 L1TD1Q5T7N2 865 aaKnown RBP16.02■□□□□ 0.16
HCFC1-202ENST00000369984 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.15
HCFC1-202ENST00000369984 OS9Q13438 667 aaPredicted RBP16.02■□□□□ 0.15
HCFC1-202ENST00000369984 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
HCFC1-202ENST00000369984 FRAT1Q92837 279 aaPredicted RBP16.01■□□□□ 0.15
HCFC1-202ENST00000369984 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
HCFC1-202ENST00000369984 HSCBQ8IWL3 235 aa16■□□□□ 0.15
HCFC1-202ENST00000369984 GOLGA6L4A6NEF3 574 aa16■□□□□ 0.15
HCFC1-202ENST00000369984 CLIP1P30622 1438 aa15.99■□□□□ 0.15
HCFC1-202ENST00000369984 NPHP1O15259 732 aa15.99■□□□□ 0.15
HCFC1-202ENST00000369984 CHMP4BQ9H444 224 aaKnown RBP15.98■□□□□ 0.15
HCFC1-202ENST00000369984 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
HCFC1-202ENST00000369984 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
HCFC1-202ENST00000369984 ZCCHC6Q5VYS8 1495 aaKnown RBP15.95■□□□□ 0.14
HCFC1-202ENST00000369984 SPRYD3Q8NCJ5 442 aa15.94■□□□□ 0.14
HCFC1-202ENST00000369984 CARD11Q9BXL7 1154 aa15.94■□□□□ 0.14
HCFC1-202ENST00000369984 CLSTN1O94985 981 aa15.93■□□□□ 0.14
HCFC1-202ENST00000369984 B4GALNT3Q6L9W6 998 aa15.93■□□□□ 0.14
HCFC1-202ENST00000369984 DEKP35659 375 aaKnown RBP15.93■□□□□ 0.14
HCFC1-202ENST00000369984 CALRP27797 417 aaKnown RBP15.93■□□□□ 0.14
HCFC1-202ENST00000369984 MS4A1P11836 297 aa15.93■□□□□ 0.14
HCFC1-202ENST00000369984 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
HCFC1-202ENST00000369984 MCCP23508 829 aa15.91■□□□□ 0.14
HCFC1-202ENST00000369984 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
HCFC1-202ENST00000369984 CC2D1BQ5T0F9 858 aaKnown RBP15.9■□□□□ 0.14
HCFC1-202ENST00000369984 PNNQ9H307 717 aaKnown RBP15.89■□□□□ 0.13
HCFC1-202ENST00000369984 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
HCFC1-202ENST00000369984 KIAA2012Q0VF49 1180 aa15.87■□□□□ 0.13
HCFC1-202ENST00000369984 PRM3Q9NNZ6 103 aa15.87■□□□□ 0.13
HCFC1-202ENST00000369984 GOLGA3Q08378 1498 aa15.87■□□□□ 0.13
HCFC1-202ENST00000369984 GNL2Q13823 731 aaKnown RBP15.86■□□□□ 0.13
HCFC1-202ENST00000369984 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
HCFC1-202ENST00000369984 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
HCFC1-202ENST00000369984 LMOD2Q6P5Q4 547 aa15.83■□□□□ 0.13
HCFC1-202ENST00000369984 CEP162Q5TB80 1403 aa15.83■□□□□ 0.12
HCFC1-202ENST00000369984 POGKQ9P215 609 aa15.83■□□□□ 0.12
HCFC1-202ENST00000369984 PTMSP20962 102 aa15.81■□□□□ 0.12
HCFC1-202ENST00000369984 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
HCFC1-202ENST00000369984 PLEKHD1A6NEE1 506 aa15.79■□□□□ 0.12
HCFC1-202ENST00000369984 GBP4Q96PP9 640 aa15.79■□□□□ 0.12
HCFC1-202ENST00000369984 GZF1Q9H116 711 aaPredicted RBP15.79■□□□□ 0.12
HCFC1-202ENST00000369984 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
HCFC1-202ENST00000369984 KIAA1211Q6ZU35 1233 aa15.77■□□□□ 0.11
HCFC1-202ENST00000369984 ISY1Q9ULR0 285 aaKnown RBP15.77■□□□□ 0.11
HCFC1-202ENST00000369984 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
HCFC1-202ENST00000369984 RBM19Q9Y4C8 960 aaKnown RBP15.75■□□□□ 0.11
HCFC1-202ENST00000369984 A0A0U1RQG5 324 aaPredicted RBP15.74■□□□□ 0.11
HCFC1-202ENST00000369984 SYAP1Q96A49 352 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms