RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 USP35Q9P2H5 1018 aa15.64■□□□□ 0.09
GFRA1-203ENST00000369236 DDX10Q13206 875 aaKnown RBP15.62■□□□□ 0.09
GFRA1-203ENST00000369236 MRS2Q9HD23 443 aa15.61■□□□□ 0.09
GFRA1-203ENST00000369236 RSPH6AQ9H0K4 717 aa15.6■□□□□ 0.09
GFRA1-203ENST00000369236 SETQ01105 290 aaPredicted RBP15.6■□□□□ 0.09
GFRA1-203ENST00000369236 LAS1LQ9Y4W2 734 aaKnown RBP15.58■□□□□ 0.08
GFRA1-203ENST00000369236 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.08
GFRA1-203ENST00000369236 KIAA2012Q0VF49 1180 aa15.56■□□□□ 0.08
GFRA1-203ENST00000369236 GOLGA6L1Q8N7Z2 621 aa15.56■□□□□ 0.08
GFRA1-203ENST00000369236 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
GFRA1-203ENST00000369236 HSP90AA2PQ14568 343 aaPredicted RBP15.55■□□□□ 0.08
GFRA1-203ENST00000369236 ARID4BQ4LE39 1312 aaPredicted RBP15.53■□□□□ 0.08
GFRA1-203ENST00000369236 PPP4R2Q9NY27 417 aa15.53■□□□□ 0.08
GFRA1-203ENST00000369236 IRX6P78412 446 aaPredicted RBP15.52■□□□□ 0.08
GFRA1-203ENST00000369236 PLCB2Q00722 1185 aa15.52■□□□□ 0.08
GFRA1-203ENST00000369236 DRC7Q8IY82 874 aa15.51■□□□□ 0.07
GFRA1-203ENST00000369236 HSCBQ8IWL3 235 aa15.51■□□□□ 0.07
GFRA1-203ENST00000369236 CHMP4BQ9H444 224 aaKnown RBP15.5■□□□□ 0.07
GFRA1-203ENST00000369236 CFAP44Q96MT7 982 aa15.5■□□□□ 0.07
GFRA1-203ENST00000369236 SALL2Q9Y467 1007 aaPredicted RBP15.49■□□□□ 0.07
GFRA1-203ENST00000369236 MIER1Q8N108 512 aa15.49■□□□□ 0.07
GFRA1-203ENST00000369236 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.48■□□□□ 0.07
GFRA1-203ENST00000369236 FTSJ3Q8IY81 847 aaKnown RBP15.47■□□□□ 0.07
GFRA1-203ENST00000369236 GOLGA6L4A6NEF3 574 aa15.45■□□□□ 0.06
GFRA1-203ENST00000369236 NOC3LQ8WTT2 800 aaKnown RBP15.45■□□□□ 0.06
GFRA1-203ENST00000369236 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
GFRA1-203ENST00000369236 GBP4Q96PP9 640 aa15.44■□□□□ 0.06
GFRA1-203ENST00000369236 A0A0U1RQG5 324 aaPredicted RBP15.41■□□□□ 0.06
GFRA1-203ENST00000369236 MS4A1P11836 297 aa15.4■□□□□ 0.06
GFRA1-203ENST00000369236 SUPT16HQ9Y5B9 1047 aaKnown RBP15.39■□□□□ 0.05
GFRA1-203ENST00000369236 GOLGA6L3A6NEY3 463 aa15.37■□□□□ 0.05
GFRA1-203ENST00000369236 MCCP23508 829 aa15.37■□□□□ 0.05
GFRA1-203ENST00000369236 TPRNQ4KMQ1 711 aa15.34■□□□□ 0.05
GFRA1-203ENST00000369236 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
GFRA1-203ENST00000369236 PHF14O94880 888 aa15.34■□□□□ 0.05
GFRA1-203ENST00000369236 RBM19Q9Y4C8 960 aaKnown RBP15.32■□□□□ 0.04
GFRA1-203ENST00000369236 TPM4P67936 248 aa15.32■□□□□ 0.04
GFRA1-203ENST00000369236 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
GFRA1-203ENST00000369236 FGD1P98174 961 aa15.31■□□□□ 0.04
GFRA1-203ENST00000369236 ARID3AQ99856 593 aa15.3■□□□□ 0.04
GFRA1-203ENST00000369236 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
GFRA1-203ENST00000369236 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
GFRA1-203ENST00000369236 GPS2Q13227 327 aa15.28■□□□□ 0.04
GFRA1-203ENST00000369236 APPP05067 770 aa15.28■□□□□ 0.04
GFRA1-203ENST00000369236 CFAP53Q96M91 514 aa15.27■□□□□ 0.04
GFRA1-203ENST00000369236 RGS3P49796 1198 aa15.27■□□□□ 0.03
GFRA1-203ENST00000369236 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
GFRA1-203ENST00000369236 CSPP1Q1MSJ5 1256 aa15.25■□□□□ 0.03
GFRA1-203ENST00000369236 TEX35Q5T0J7 233 aa15.25■□□□□ 0.03
GFRA1-203ENST00000369236 CDCA8Q53HL2 280 aa15.24■□□□□ 0.03
GFRA1-203ENST00000369236 ZNF771Q7L3S4 317 aaPredicted RBP15.24■□□□□ 0.03
GFRA1-203ENST00000369236 KCNJ4P48050 445 aa15.24■□□□□ 0.03
GFRA1-203ENST00000369236 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
GFRA1-203ENST00000369236 ESF1Q9H501 851 aaKnown RBP15.22■□□□□ 0.03
GFRA1-203ENST00000369236 MTERF4Q7Z6M4 381 aaKnown RBP15.22■□□□□ 0.03
GFRA1-203ENST00000369236 CCDC34Q96HJ3 373 aa15.21■□□□□ 0.03
GFRA1-203ENST00000369236 ZNF777Q9ULD5 760 aaPredicted RBP15.19■□□□□ 0.02
GFRA1-203ENST00000369236 DDX11L8A8MPP1 907 aa15.18■□□□□ 0.02
GFRA1-203ENST00000369236 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
GFRA1-203ENST00000369236 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
GFRA1-203ENST00000369236 TULP1O00294 542 aaPredicted RBP15.18■□□□□ 0.02
GFRA1-203ENST00000369236 KNSTRNQ9Y448 316 aa15.17■□□□□ 0.02
GFRA1-203ENST00000369236 CCDC70Q6NSX1 233 aa15.16■□□□□ 0.02
GFRA1-203ENST00000369236 TCERG1O14776 1098 aaKnown RBP15.16■□□□□ 0.02
GFRA1-203ENST00000369236 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
GFRA1-203ENST00000369236 GZF1Q9H116 711 aaPredicted RBP15.15■□□□□ 0.02
GFRA1-203ENST00000369236 MAP7D2Q96T17 732 aa15.15■□□□□ 0.02
GFRA1-203ENST00000369236 PKNOX2Q96KN3 472 aa15.14■□□□□ 0.01
GFRA1-203ENST00000369236 CALD1Q05682 793 aaKnown RBP15.14■□□□□ 0.01
GFRA1-203ENST00000369236 NAP1L2Q9ULW6 460 aaPredicted RBP15.13■□□□□ 0.01
GFRA1-203ENST00000369236 TPM3P06753 285 aa15.12■□□□□ 0.01
GFRA1-203ENST00000369236 CWC15Q9P013 229 aaKnown RBP15.12■□□□□ 0.01
GFRA1-203ENST00000369236 MAPK8IP3Q9UPT6 1336 aa15.12■□□□□ 0.01
GFRA1-203ENST00000369236 OS9Q13438 667 aaPredicted RBP15.11■□□□□ 0.01
GFRA1-203ENST00000369236 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.11■□□□□ 0.01
GFRA1-203ENST00000369236 CHGAP10645 457 aaKnown RBP15.11■□□□□ 0.01
GFRA1-203ENST00000369236 RRP12Q5JTH9 1297 aaKnown RBP15.11■□□□□ 0.01
GFRA1-203ENST00000369236 SKOR2Q2VWA4 1001 aaPredicted RBP15.09■□□□□ 0.01
GFRA1-203ENST00000369236 KIAA1211Q6ZU35 1233 aa15.09■□□□□ 0.01
GFRA1-203ENST00000369236 CLSTN1O94985 981 aa15.09■□□□□ 0.01
GFRA1-203ENST00000369236 CCDC66A2RUB6 948 aa15.09■□□□□ 0.01
GFRA1-203ENST00000369236 PODXL2Q9NZ53 605 aa15.08■□□□□ 0
GFRA1-203ENST00000369236 ZBTB7CA1YPR0 619 aa15.08■□□□□ 0
GFRA1-203ENST00000369236 SPRYD3Q8NCJ5 442 aa15.08■□□□□ 0
GFRA1-203ENST00000369236 GSE1Q14687 1217 aa15.07■□□□□ 0
GFRA1-203ENST00000369236 CCER2I3L3R5 266 aa15.07■□□□□ 0
GFRA1-203ENST00000369236 KIF16BQ96L93 1317 aa15.06■□□□□ 0
GFRA1-203ENST00000369236 FRAT1Q92837 279 aaPredicted RBP15.06■□□□□ 0
GFRA1-203ENST00000369236 NUDCQ9Y266 331 aa15.05■□□□□ 0
GFRA1-203ENST00000369236 HAP1P54257 671 aaPredicted RBP15.05■□□□□ -0
GFRA1-203ENST00000369236 HMMRO75330 724 aa15.04■□□□□ -0
GFRA1-203ENST00000369236 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
GFRA1-203ENST00000369236 GOLGA2Q08379 1002 aa15.03■□□□□ -0
GFRA1-203ENST00000369236 SLKQ9H2G2 1235 aaPredicted RBP15.03■□□□□ -0
GFRA1-203ENST00000369236 MTUS2Q5JR59 1369 aa15.02□□□□□ -0.01
GFRA1-203ENST00000369236 ACBD3Q9H3P7 528 aa15.02□□□□□ -0.01
GFRA1-203ENST00000369236 RDXP35241 583 aaKnown RBP15.01□□□□□ -0.01
GFRA1-203ENST00000369236 TAF3Q5VWG9 929 aa15.01□□□□□ -0.01
GFRA1-203ENST00000369236 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
GFRA1-203ENST00000369236 TSR1Q2NL82 804 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms