RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 RGL3Q3MIN7 710 aa9.48□□□□□ -0.89
SPTA1-201ENST00000368147 ANP32AP39687 249 aaKnown RBP9.47□□□□□ -0.89
SPTA1-201ENST00000368147 TONSLQ96HA7 1378 aa9.47□□□□□ -0.89
SPTA1-201ENST00000368147 SOX12O15370 315 aa9.46□□□□□ -0.89
SPTA1-201ENST00000368147 WDR43Q15061 677 aaKnown RBP eCLIP9.46□□□□□ -0.893e-6■□□□□ 11.1
SPTA1-201ENST00000368147 TSPY4P0CV99 314 aa9.46□□□□□ -0.9
SPTA1-201ENST00000368147 TSPY10P0CW01 314 aa9.46□□□□□ -0.9
SPTA1-201ENST00000368147 LAS1LQ9Y4W2 734 aaKnown RBP9.45□□□□□ -0.9
SPTA1-201ENST00000368147 RRP7BPQ9NSQ0 103 aa9.45□□□□□ -0.9
SPTA1-201ENST00000368147 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
SPTA1-201ENST00000368147 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
SPTA1-201ENST00000368147 GTF3C3Q9Y5Q9 886 aa9.43□□□□□ -0.9
SPTA1-201ENST00000368147 DDX10Q13206 875 aaKnown RBP9.42□□□□□ -0.9
SPTA1-201ENST00000368147 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
SPTA1-201ENST00000368147 HNRNPUQ00839 825 aaKnown RBP eCLIP9.4□□□□□ -0.9
SPTA1-201ENST00000368147 AEBP2Q6ZN18 517 aaPredicted RBP9.4□□□□□ -0.9
SPTA1-201ENST00000368147 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
SPTA1-201ENST00000368147 CCDC9Q9Y3X0 531 aaKnown RBP9.38□□□□□ -0.91
SPTA1-201ENST00000368147 MTUS2Q5JR59 1369 aa9.38□□□□□ -0.91
SPTA1-201ENST00000368147 MYH16Q9H6N6 1097 aa9.38□□□□□ -0.91
SPTA1-201ENST00000368147 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
SPTA1-201ENST00000368147 FKBP8Q14318 412 aa9.36□□□□□ -0.91
SPTA1-201ENST00000368147 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
SPTA1-201ENST00000368147 SAFB2Q14151 953 aaKnown RBP eCLIP9.36□□□□□ -0.91
SPTA1-201ENST00000368147 AMER1Q5JTC6 1135 aaPredicted RBP9.35□□□□□ -0.91
SPTA1-201ENST00000368147 POGKQ9P215 609 aa9.35□□□□□ -0.91
SPTA1-201ENST00000368147 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
SPTA1-201ENST00000368147 PLEKHD1A6NEE1 506 aa9.34□□□□□ -0.91
SPTA1-201ENST00000368147 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
SPTA1-201ENST00000368147 CLSTN1O94985 981 aa9.33□□□□□ -0.92
SPTA1-201ENST00000368147 PAK3O75914 559 aaPredicted RBP9.33□□□□□ -0.92
SPTA1-201ENST00000368147 GOLGA2Q08379 1002 aa9.32□□□□□ -0.92
SPTA1-201ENST00000368147 NBR1Q14596 966 aa9.31□□□□□ -0.92
SPTA1-201ENST00000368147 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
SPTA1-201ENST00000368147 CALRP27797 417 aaKnown RBP9.31□□□□□ -0.92
SPTA1-201ENST00000368147 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.3□□□□□ -0.92
SPTA1-201ENST00000368147 NAP1L2Q9ULW6 460 aaPredicted RBP9.3□□□□□ -0.92
SPTA1-201ENST00000368147 ANP32EQ9BTT0 268 aa9.3□□□□□ -0.92
SPTA1-201ENST00000368147 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
SPTA1-201ENST00000368147 STK26Q9P289 416 aa9.29□□□□□ -0.92
SPTA1-201ENST00000368147 MRS2Q9HD23 443 aa9.27□□□□□ -0.92
SPTA1-201ENST00000368147 OS9Q13438 667 aaPredicted RBP9.27□□□□□ -0.93
SPTA1-201ENST00000368147 PHF23Q9BUL5 403 aaPredicted RBP9.26□□□□□ -0.93
SPTA1-201ENST00000368147 CCDC136Q96JN2 1154 aa9.26□□□□□ -0.93
SPTA1-201ENST00000368147 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
SPTA1-201ENST00000368147 CC2D1BQ5T0F9 858 aaKnown RBP9.25□□□□□ -0.93
SPTA1-201ENST00000368147 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
SPTA1-201ENST00000368147 ZCCHC6Q5VYS8 1495 aaKnown RBP9.25□□□□□ -0.93
SPTA1-201ENST00000368147 GGT6Q6P531 493 aa9.24□□□□□ -0.93
SPTA1-201ENST00000368147 CSB-PGBD3P0DP91 1061 aa9.23□□□□□ -0.93
SPTA1-201ENST00000368147 NUTM2DQ5VT03 806 aaPredicted RBP9.23□□□□□ -0.93
SPTA1-201ENST00000368147 FTSJ3Q8IY81 847 aaKnown RBP9.22□□□□□ -0.93
SPTA1-201ENST00000368147 SRPK2P78362 688 aaKnown RBP9.22□□□□□ -0.93
SPTA1-201ENST00000368147 KNSTRNQ9Y448 316 aa9.21□□□□□ -0.93
SPTA1-201ENST00000368147 CFAP53Q96M91 514 aa9.21□□□□□ -0.94
SPTA1-201ENST00000368147 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
SPTA1-201ENST00000368147 ANO8Q9HCE9 1232 aaPredicted RBP9.2□□□□□ -0.94
SPTA1-201ENST00000368147 BAZ1BQ9UIG0 1483 aaKnown RBP9.2□□□□□ -0.94
SPTA1-201ENST00000368147 MEX3CQ5U5Q3 659 aaKnown RBP9.2□□□□□ -0.94
SPTA1-201ENST00000368147 MAPK8IP3Q9UPT6 1336 aa9.2□□□□□ -0.94
SPTA1-201ENST00000368147 NUTM2FA1L443 756 aa9.19□□□□□ -0.94
SPTA1-201ENST00000368147 MSH5O43196 834 aa9.19□□□□□ -0.94
SPTA1-201ENST00000368147 FRAT1Q92837 279 aaPredicted RBP9.18□□□□□ -0.94
SPTA1-201ENST00000368147 CARD11Q9BXL7 1154 aa9.18□□□□□ -0.94
SPTA1-201ENST00000368147 L1TD1Q5T7N2 865 aaKnown RBP9.18□□□□□ -0.94
SPTA1-201ENST00000368147 G3V3G9 751 aa9.17□□□□□ -0.94
SPTA1-201ENST00000368147 DCAF8Q5TAQ9 597 aa9.17□□□□□ -0.94
SPTA1-201ENST00000368147 FGD1P98174 961 aa9.17□□□□□ -0.94
SPTA1-201ENST00000368147 PTMSP20962 102 aa9.17□□□□□ -0.94
SPTA1-201ENST00000368147 ZRSR1Q15695 479 aaKnown RBP9.17□□□□□ -0.94
SPTA1-201ENST00000368147 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
SPTA1-201ENST00000368147 EIF4G2P78344 907 aaKnown RBP eCLIP9.16□□□□□ -0.945e-12■■■□□ 17.2
SPTA1-201ENST00000368147 TMX4Q9H1E5 349 aaPredicted RBP9.16□□□□□ -0.94
SPTA1-201ENST00000368147 KCNJ4P48050 445 aa9.16□□□□□ -0.94
SPTA1-201ENST00000368147 APBB1O00213 710 aa9.14□□□□□ -0.95
SPTA1-201ENST00000368147 ERICH6BQ5W0A0 696 aa9.14□□□□□ -0.95
SPTA1-201ENST00000368147 DNTTIP2Q5QJE6 756 aaKnown RBP9.14□□□□□ -0.95
SPTA1-201ENST00000368147 GOLGA6L6A8MZA4 724 aa9.14□□□□□ -0.95
SPTA1-201ENST00000368147 CHMP3Q9Y3E7 222 aa9.14□□□□□ -0.95
SPTA1-201ENST00000368147 CCDC180Q9P1Z9 1646 aa9.13□□□□□ -0.95
SPTA1-201ENST00000368147 RSF1Q96T23 1441 aaPredicted RBP9.13□□□□□ -0.95
SPTA1-201ENST00000368147 KANK1Q14678 1352 aa9.13□□□□□ -0.95
SPTA1-201ENST00000368147 PLCB2Q00722 1185 aa9.13□□□□□ -0.95
SPTA1-201ENST00000368147 GOLGA6L22H0YM25 854 aa9.13□□□□□ -0.95
SPTA1-201ENST00000368147 PRM3Q9NNZ6 103 aa9.13□□□□□ -0.95
SPTA1-201ENST00000368147 NRDCO43847 1150 aa9.12□□□□□ -0.95
SPTA1-201ENST00000368147 LTV1Q96GA3 475 aaPredicted RBP9.12□□□□□ -0.95
SPTA1-201ENST00000368147 CLIP1P30622 1438 aa9.12□□□□□ -0.95
SPTA1-201ENST00000368147 DCAF11Q8TEB1 546 aa9.12□□□□□ -0.95
SPTA1-201ENST00000368147 HDGFP51858 240 aaKnown RBP9.11□□□□□ -0.95
SPTA1-201ENST00000368147 RTF1Q92541 710 aaKnown RBP9.11□□□□□ -0.95
SPTA1-201ENST00000368147 NUDCQ9Y266 331 aa9.11□□□□□ -0.95
SPTA1-201ENST00000368147 USP35Q9P2H5 1018 aa9.1□□□□□ -0.95
SPTA1-201ENST00000368147 CHAF1AQ13111 956 aaPredicted RBP9.1□□□□□ -0.95
SPTA1-201ENST00000368147 FOXD1Q16676 465 aa9.1□□□□□ -0.95
SPTA1-201ENST00000368147 PDE4CQ08493 712 aa9.1□□□□□ -0.95
SPTA1-201ENST00000368147 TNNT3P45378 269 aaPredicted RBP9.09□□□□□ -0.95
SPTA1-201ENST00000368147 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
SPTA1-201ENST00000368147 EVA1CP58658 441 aa9.09□□□□□ -0.95
SPTA1-201ENST00000368147 SPRYD3Q8NCJ5 442 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms