RNA–Protein interactions for RNA: ENST00000367424.4

CFHR1-202, Transcript of complement factor H related 1, humanhuman

TSL 5 BASIC

Gene CFHR1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-202ENST00000367424 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
CFHR1-202ENST00000367424 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
CFHR1-202ENST00000367424 ATMINO43313 823 aaPredicted RBP12.9□□□□□ -0.34
CFHR1-202ENST00000367424 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
CFHR1-202ENST00000367424 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
CFHR1-202ENST00000367424 C7P10643 843 aa12.84□□□□□ -0.35
CFHR1-202ENST00000367424 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
CFHR1-202ENST00000367424 NPM1P06748 294 aaKnown RBP eCLIP12.81□□□□□ -0.36
CFHR1-202ENST00000367424 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
CFHR1-202ENST00000367424 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
CFHR1-202ENST00000367424 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
CFHR1-202ENST00000367424 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
CFHR1-202ENST00000367424 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
CFHR1-202ENST00000367424 PROM2Q8N271 834 aa12.67□□□□□ -0.38
CFHR1-202ENST00000367424 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
CFHR1-202ENST00000367424 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
CFHR1-202ENST00000367424 CCDC61Q9Y6R9 512 aa12.66□□□□□ -0.38
CFHR1-202ENST00000367424 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
CFHR1-202ENST00000367424 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
CFHR1-202ENST00000367424 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
CFHR1-202ENST00000367424 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
CFHR1-202ENST00000367424 MAP3K13O43283 966 aa12.52□□□□□ -0.41
CFHR1-202ENST00000367424 TIE1P35590 1138 aa12.48□□□□□ -0.41
CFHR1-202ENST00000367424 TTLL13PA6NNM8 815 aa12.46□□□□□ -0.41
CFHR1-202ENST00000367424 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
CFHR1-202ENST00000367424 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
CFHR1-202ENST00000367424 ST18O60284 1047 aa12.42□□□□□ -0.42
CFHR1-202ENST00000367424 SEC24BO95487 1268 aa12.41□□□□□ -0.42
CFHR1-202ENST00000367424 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
CFHR1-202ENST00000367424 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
CFHR1-202ENST00000367424 MMRN1Q13201 1228 aa12.33□□□□□ -0.44
CFHR1-202ENST00000367424 IER5LQ5T953 404 aa12.32□□□□□ -0.44
CFHR1-202ENST00000367424 VASPP50552 380 aaPredicted RBP12.3□□□□□ -0.44
CFHR1-202ENST00000367424 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
CFHR1-202ENST00000367424 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
CFHR1-202ENST00000367424 MIER1Q8N108 512 aa12.23□□□□□ -0.45
CFHR1-202ENST00000367424 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
CFHR1-202ENST00000367424 PLCD3Q8N3E9 789 aa12.21□□□□□ -0.45
CFHR1-202ENST00000367424 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
CFHR1-202ENST00000367424 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
CFHR1-202ENST00000367424 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
CFHR1-202ENST00000367424 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
CFHR1-202ENST00000367424 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
CFHR1-202ENST00000367424 PLCG2P16885 1265 aa12.16□□□□□ -0.46
CFHR1-202ENST00000367424 NUBP1P53384 320 aa12.15□□□□□ -0.46
CFHR1-202ENST00000367424 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
CFHR1-202ENST00000367424 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
CFHR1-202ENST00000367424 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
CFHR1-202ENST00000367424 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
CFHR1-202ENST00000367424 OCEL1Q9H607 264 aa12.05□□□□□ -0.48
CFHR1-202ENST00000367424 POTEB3A0JP26 581 aa12.04□□□□□ -0.48
CFHR1-202ENST00000367424 POTEBQ6S5H4 581 aa12.04□□□□□ -0.48
CFHR1-202ENST00000367424 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
CFHR1-202ENST00000367424 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
CFHR1-202ENST00000367424 SNPHO15079 494 aa12.01□□□□□ -0.49
CFHR1-202ENST00000367424 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
CFHR1-202ENST00000367424 SPOCK2Q92563 424 aa11.97□□□□□ -0.49
CFHR1-202ENST00000367424 EMP3P54852 163 aa11.95□□□□□ -0.5
CFHR1-202ENST00000367424 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
CFHR1-202ENST00000367424 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
CFHR1-202ENST00000367424 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
CFHR1-202ENST00000367424 PCDHB8Q9UN66 801 aa11.92□□□□□ -0.5
CFHR1-202ENST00000367424 PYGBP11216 843 aa11.9□□□□□ -0.5
CFHR1-202ENST00000367424 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
CFHR1-202ENST00000367424 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
CFHR1-202ENST00000367424 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
CFHR1-202ENST00000367424 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
CFHR1-202ENST00000367424 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
CFHR1-202ENST00000367424 GSE1Q14687 1217 aa11.77□□□□□ -0.53
CFHR1-202ENST00000367424 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
CFHR1-202ENST00000367424 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
CFHR1-202ENST00000367424 HOXB3P14651 431 aaPredicted RBP11.72□□□□□ -0.53
CFHR1-202ENST00000367424 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
CFHR1-202ENST00000367424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
CFHR1-202ENST00000367424 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
CFHR1-202ENST00000367424 PKD2Q13563 968 aa11.7□□□□□ -0.54
CFHR1-202ENST00000367424 ILDR1Q86SU0 546 aaPredicted RBP11.68□□□□□ -0.54
CFHR1-202ENST00000367424 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
CFHR1-202ENST00000367424 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
CFHR1-202ENST00000367424 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
CFHR1-202ENST00000367424 RNF166Q96A37 237 aaPredicted RBP11.63□□□□□ -0.55
CFHR1-202ENST00000367424 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
CFHR1-202ENST00000367424 ZNF467Q7Z7K2 595 aaPredicted RBP11.62□□□□□ -0.55
CFHR1-202ENST00000367424 PSEN1P49768 467 aa11.61□□□□□ -0.55
CFHR1-202ENST00000367424 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
CFHR1-202ENST00000367424 ERBB3P21860 1342 aa11.57□□□□□ -0.56
CFHR1-202ENST00000367424 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
CFHR1-202ENST00000367424 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
CFHR1-202ENST00000367424 RGL2O15211 777 aa11.53□□□□□ -0.56
CFHR1-202ENST00000367424 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
CFHR1-202ENST00000367424 ZNF710Q8N1W2 664 aa11.53□□□□□ -0.56
CFHR1-202ENST00000367424 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
CFHR1-202ENST00000367424 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
CFHR1-202ENST00000367424 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
CFHR1-202ENST00000367424 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
CFHR1-202ENST00000367424 PDAP1Q13442 181 aaKnown RBP11.46□□□□□ -0.57
CFHR1-202ENST00000367424 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
CFHR1-202ENST00000367424 G3V3G9 751 aa11.43□□□□□ -0.58
CFHR1-202ENST00000367424 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
CFHR1-202ENST00000367424 ZNF687Q8N1G0 1237 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms