RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
RNU4-4P-201ENST00000364588 CLCN6P51797 869 aa12.62□□□□□ -0.39
RNU4-4P-201ENST00000364588 GSE1Q14687 1217 aa12.58□□□□□ -0.4
RNU4-4P-201ENST00000364588 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
RNU4-4P-201ENST00000364588 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
RNU4-4P-201ENST00000364588 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
RNU4-4P-201ENST00000364588 GABBR2O75899 941 aa12.48□□□□□ -0.41
RNU4-4P-201ENST00000364588 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
RNU4-4P-201ENST00000364588 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
RNU4-4P-201ENST00000364588 KIF12Q96FN5 646 aa12.44□□□□□ -0.42
RNU4-4P-201ENST00000364588 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
RNU4-4P-201ENST00000364588 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
RNU4-4P-201ENST00000364588 MAP3K13O43283 966 aa12.39□□□□□ -0.43
RNU4-4P-201ENST00000364588 PYGBP11216 843 aa12.39□□□□□ -0.43
RNU4-4P-201ENST00000364588 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
RNU4-4P-201ENST00000364588 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
RNU4-4P-201ENST00000364588 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
RNU4-4P-201ENST00000364588 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
RNU4-4P-201ENST00000364588 DCBLD2Q96PD2 775 aa12.33□□□□□ -0.44
RNU4-4P-201ENST00000364588 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
RNU4-4P-201ENST00000364588 TIE1P35590 1138 aa12.27□□□□□ -0.45
RNU4-4P-201ENST00000364588 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
RNU4-4P-201ENST00000364588 PKD2Q13563 968 aa12.24□□□□□ -0.45
RNU4-4P-201ENST00000364588 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
RNU4-4P-201ENST00000364588 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
RNU4-4P-201ENST00000364588 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
RNU4-4P-201ENST00000364588 PDAP1Q13442 181 aaKnown RBP12.19□□□□□ -0.46
RNU4-4P-201ENST00000364588 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
RNU4-4P-201ENST00000364588 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
RNU4-4P-201ENST00000364588 TRPC6Q9Y210 931 aa12.19□□□□□ -0.46
RNU4-4P-201ENST00000364588 TTLL13PA6NNM8 815 aa12.17□□□□□ -0.46
RNU4-4P-201ENST00000364588 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
RNU4-4P-201ENST00000364588 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
RNU4-4P-201ENST00000364588 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
RNU4-4P-201ENST00000364588 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
RNU4-4P-201ENST00000364588 RNF25Q96BH1 459 aaPredicted RBP12.15□□□□□ -0.46
RNU4-4P-201ENST00000364588 VGFO15240 615 aaPredicted RBP12.14□□□□□ -0.47
RNU4-4P-201ENST00000364588 PSEN1P49768 467 aa12.14□□□□□ -0.47
RNU4-4P-201ENST00000364588 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
RNU4-4P-201ENST00000364588 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
RNU4-4P-201ENST00000364588 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
RNU4-4P-201ENST00000364588 RGL2O15211 777 aa12.09□□□□□ -0.47
RNU4-4P-201ENST00000364588 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
RNU4-4P-201ENST00000364588 C7P10643 843 aa12.06□□□□□ -0.48
RNU4-4P-201ENST00000364588 IER5LQ5T953 404 aa12.06□□□□□ -0.48
RNU4-4P-201ENST00000364588 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
RNU4-4P-201ENST00000364588 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
RNU4-4P-201ENST00000364588 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
RNU4-4P-201ENST00000364588 ZFP91Q96JP5 570 aaPredicted RBP12.03□□□□□ -0.48
RNU4-4P-201ENST00000364588 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
RNU4-4P-201ENST00000364588 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
RNU4-4P-201ENST00000364588 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
RNU4-4P-201ENST00000364588 STK25O00506 426 aa11.97□□□□□ -0.49
RNU4-4P-201ENST00000364588 SEC24BO95487 1268 aa11.96□□□□□ -0.49
RNU4-4P-201ENST00000364588 BCL11BQ9C0K0 894 aaPredicted RBP11.96□□□□□ -0.49
RNU4-4P-201ENST00000364588 PLCG2P16885 1265 aa11.94□□□□□ -0.5
RNU4-4P-201ENST00000364588 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
RNU4-4P-201ENST00000364588 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
RNU4-4P-201ENST00000364588 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
RNU4-4P-201ENST00000364588 HS6ST3Q8IZP7 471 aa11.91□□□□□ -0.5
RNU4-4P-201ENST00000364588 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
RNU4-4P-201ENST00000364588 EFCAB3Q8N7B9 438 aa11.88□□□□□ -0.51
RNU4-4P-201ENST00000364588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.51
RNU4-4P-201ENST00000364588 SOX12O15370 315 aa11.87□□□□□ -0.51
RNU4-4P-201ENST00000364588 LHX8Q68G74 356 aa11.87□□□□□ -0.51
RNU4-4P-201ENST00000364588 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
RNU4-4P-201ENST00000364588 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
RNU4-4P-201ENST00000364588 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
RNU4-4P-201ENST00000364588 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
RNU4-4P-201ENST00000364588 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
RNU4-4P-201ENST00000364588 MAMSTRQ6ZN01 415 aa11.81□□□□□ -0.52
RNU4-4P-201ENST00000364588 NLRP6P59044 892 aa11.8□□□□□ -0.52
RNU4-4P-201ENST00000364588 DNAJC5Q9H3Z4 198 aa11.79□□□□□ -0.52
RNU4-4P-201ENST00000364588 POTEB2H3BUK9 544 aa11.77□□□□□ -0.53
RNU4-4P-201ENST00000364588 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.53
RNU4-4P-201ENST00000364588 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
RNU4-4P-201ENST00000364588 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
RNU4-4P-201ENST00000364588 G3V3G9 751 aa11.75□□□□□ -0.53
RNU4-4P-201ENST00000364588 MFRPQ9BY79 579 aa11.74□□□□□ -0.53
RNU4-4P-201ENST00000364588 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
RNU4-4P-201ENST00000364588 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
RNU4-4P-201ENST00000364588 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
RNU4-4P-201ENST00000364588 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
RNU4-4P-201ENST00000364588 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
RNU4-4P-201ENST00000364588 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
RNU4-4P-201ENST00000364588 ABCC9O60706 1549 aa11.67□□□□□ -0.54
RNU4-4P-201ENST00000364588 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
RNU4-4P-201ENST00000364588 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
RNU4-4P-201ENST00000364588 NKX1-1Q15270 411 aaPredicted RBP11.65□□□□□ -0.54
RNU4-4P-201ENST00000364588 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
RNU4-4P-201ENST00000364588 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
RNU4-4P-201ENST00000364588 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
RNU4-4P-201ENST00000364588 TMEM121BQ9BXQ6 578 aaPredicted RBP11.62□□□□□ -0.55
RNU4-4P-201ENST00000364588 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
RNU4-4P-201ENST00000364588 CCDC180Q9P1Z9 1646 aa11.59□□□□□ -0.55
RNU4-4P-201ENST00000364588 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
RNU4-4P-201ENST00000364588 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
RNU4-4P-201ENST00000364588 PPP1R37O75864 691 aa11.51□□□□□ -0.57
RNU4-4P-201ENST00000364588 SPRYD3Q8NCJ5 442 aa11.47□□□□□ -0.57
RNU4-4P-201ENST00000364588 SNPHO15079 494 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms