RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 ZBTB47Q9UFB7 747 aaPredicted RBP7.32□□□□□ -1.24
RNU6-1249P-201ENST00000363237 CIZ1Q9ULV3 898 aaPredicted RBP7.32□□□□□ -1.24
RNU6-1249P-201ENST00000363237 PLEKHG5O94827 1062 aa7.3□□□□□ -1.24
RNU6-1249P-201ENST00000363237 HS6ST3Q8IZP7 471 aa7.3□□□□□ -1.24
RNU6-1249P-201ENST00000363237 TMEM132AQ24JP5 1023 aa7.27□□□□□ -1.25
RNU6-1249P-201ENST00000363237 DAXXQ9UER7 740 aaPredicted RBP7.27□□□□□ -1.25
RNU6-1249P-201ENST00000363237 SPDYE2BA6NHP3 402 aa7.26□□□□□ -1.25
RNU6-1249P-201ENST00000363237 SPDYE6P0CI01 402 aa7.26□□□□□ -1.25
RNU6-1249P-201ENST00000363237 SPDYE2Q495Y8 402 aa7.26□□□□□ -1.25
RNU6-1249P-201ENST00000363237 SSUH2Q9Y2M2 353 aa7.25□□□□□ -1.25
RNU6-1249P-201ENST00000363237 PIP4P2Q8N4L2 257 aa7.24□□□□□ -1.25
RNU6-1249P-201ENST00000363237 EVX2Q03828 476 aa7.23□□□□□ -1.25
RNU6-1249P-201ENST00000363237 ABCB7O75027 752 aa7.22□□□□□ -1.25
RNU6-1249P-201ENST00000363237 PABPN1Q86U42 306 aaKnown RBP eCLIP7.22□□□□□ -1.25
RNU6-1249P-201ENST00000363237 GSE1Q14687 1217 aa7.2□□□□□ -1.26
RNU6-1249P-201ENST00000363237 GTPBP6O43824 516 aaPredicted RBP7.17□□□□□ -1.26
RNU6-1249P-201ENST00000363237 HOMEZQ8IX15 550 aa7.16□□□□□ -1.26
RNU6-1249P-201ENST00000363237 RNF25Q96BH1 459 aaPredicted RBP7.16□□□□□ -1.26
RNU6-1249P-201ENST00000363237 NKX1-1Q15270 411 aaPredicted RBP7.15□□□□□ -1.26
RNU6-1249P-201ENST00000363237 OSCARQ8IYS5 282 aa7.15□□□□□ -1.26
RNU6-1249P-201ENST00000363237 RIOK3O14730 519 aaKnown RBP7.14□□□□□ -1.27
RNU6-1249P-201ENST00000363237 C14orf37Q86TY3 774 aa7.14□□□□□ -1.27
RNU6-1249P-201ENST00000363237 RYDENQ9NUL5 291 aaKnown RBP7.14□□□□□ -1.27
RNU6-1249P-201ENST00000363237 P3H3Q8IVL6 736 aa7.13□□□□□ -1.27
RNU6-1249P-201ENST00000363237 STK25O00506 426 aa7.1□□□□□ -1.27
RNU6-1249P-201ENST00000363237 VGFO15240 615 aaPredicted RBP7.1□□□□□ -1.27
RNU6-1249P-201ENST00000363237 NUBP1P53384 320 aa7.08□□□□□ -1.28
RNU6-1249P-201ENST00000363237 DCAF8Q5TAQ9 597 aa7.08□□□□□ -1.28
RNU6-1249P-201ENST00000363237 SGIP1Q9BQI5 828 aa7.08□□□□□ -1.28
RNU6-1249P-201ENST00000363237 FXR2P51116 673 aaKnown RBP eCLIP7.07□□□□□ -1.28
RNU6-1249P-201ENST00000363237 PCDH10Q9P2E7 1040 aa7.05□□□□□ -1.28
RNU6-1249P-201ENST00000363237 POTEMA6NI47 508 aa7.04□□□□□ -1.28
RNU6-1249P-201ENST00000363237 CHRM1P11229 460 aaPredicted RBP7.04□□□□□ -1.28
RNU6-1249P-201ENST00000363237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU6-1249P-201ENST00000363237 AKT1S1Q96B36 256 aa7.04□□□□□ -1.28
RNU6-1249P-201ENST00000363237 LMOD2Q6P5Q4 547 aa7.03□□□□□ -1.28
RNU6-1249P-201ENST00000363237 FAM212AQ96EL1 285 aa7.03□□□□□ -1.28
RNU6-1249P-201ENST00000363237 WDR70Q9NW82 654 aa7.03□□□□□ -1.28
RNU6-1249P-201ENST00000363237 GABBR2O75899 941 aa7.02□□□□□ -1.29
RNU6-1249P-201ENST00000363237 STK24Q9Y6E0 443 aa7.02□□□□□ -1.29
RNU6-1249P-201ENST00000363237 BCL11BQ9C0K0 894 aaPredicted RBP7□□□□□ -1.29
RNU6-1249P-201ENST00000363237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.99□□□□□ -1.29
RNU6-1249P-201ENST00000363237 ZFP91Q96JP5 570 aaPredicted RBP6.99□□□□□ -1.29
RNU6-1249P-201ENST00000363237 BRPF1P55201 1214 aaPredicted RBP6.98□□□□□ -1.29
RNU6-1249P-201ENST00000363237 POTEGQ6S5H5 508 aa6.98□□□□□ -1.29
RNU6-1249P-201ENST00000363237 KCNV2Q8TDN2 545 aa6.97□□□□□ -1.29
RNU6-1249P-201ENST00000363237 REM2Q8IYK8 340 aaPredicted RBP6.96□□□□□ -1.3
RNU6-1249P-201ENST00000363237 NEUROD2Q15784 382 aa6.91□□□□□ -1.3
RNU6-1249P-201ENST00000363237 ZC3H15Q8WU90 426 aaKnown RBP6.91□□□□□ -1.3
RNU6-1249P-201ENST00000363237 ARHGEF1Q92888 912 aaKnown RBP6.91□□□□□ -1.3
RNU6-1249P-201ENST00000363237 SPDYE1Q8NFV5 336 aaPredicted RBP6.9□□□□□ -1.3
RNU6-1249P-201ENST00000363237 SUPT5HO00267 1087 aaKnown RBP6.89□□□□□ -1.31
RNU6-1249P-201ENST00000363237 MNX1P50219 401 aaPredicted RBP6.89□□□□□ -1.31
RNU6-1249P-201ENST00000363237 CADPS2Q86UW7 1296 aa6.89□□□□□ -1.31
RNU6-1249P-201ENST00000363237 C19orf67A6NJJ6 358 aa6.88□□□□□ -1.31
RNU6-1249P-201ENST00000363237 PITPNM1O00562 1244 aa6.88□□□□□ -1.31
RNU6-1249P-201ENST00000363237 RASEFQ8IZ41 740 aa6.88□□□□□ -1.31
RNU6-1249P-201ENST00000363237 CREBZFQ9NS37 354 aa6.88□□□□□ -1.31
RNU6-1249P-201ENST00000363237 POTEIP0CG38 1075 aa6.87□□□□□ -1.31
RNU6-1249P-201ENST00000363237 PYGBP11216 843 aa6.87□□□□□ -1.31
RNU6-1249P-201ENST00000363237 SLC24A3Q9HC58 644 aa6.87□□□□□ -1.31
RNU6-1249P-201ENST00000363237 PRR29P0C7W0 189 aa6.86□□□□□ -1.31
RNU6-1249P-201ENST00000363237 TESPA1A2RU30 521 aaPredicted RBP6.84□□□□□ -1.31
RNU6-1249P-201ENST00000363237 E2F4Q16254 413 aa6.84□□□□□ -1.31
RNU6-1249P-201ENST00000363237 ZNF467Q7Z7K2 595 aaPredicted RBP6.84□□□□□ -1.31
RNU6-1249P-201ENST00000363237 SMYD5Q6GMV2 418 aa6.83□□□□□ -1.32
RNU6-1249P-201ENST00000363237 ZMYND10O75800 440 aa6.82□□□□□ -1.32
RNU6-1249P-201ENST00000363237 PDAP1Q13442 181 aaKnown RBP6.81□□□□□ -1.32
RNU6-1249P-201ENST00000363237 CLEC11AQ9Y240 323 aa6.81□□□□□ -1.32
RNU6-1249P-201ENST00000363237 SEMA3EO15041 775 aa6.8□□□□□ -1.32
RNU6-1249P-201ENST00000363237 OTUD5Q96G74 571 aa6.8□□□□□ -1.32
RNU6-1249P-201ENST00000363237 PODXL2Q9NZ53 605 aa6.8□□□□□ -1.32
RNU6-1249P-201ENST00000363237 MFRPQ9BY79 579 aa6.78□□□□□ -1.32
RNU6-1249P-201ENST00000363237 RANGAP1P46060 587 aaPredicted RBP6.77□□□□□ -1.33
RNU6-1249P-201ENST00000363237 BARGINQ6ZT62 677 aa6.77□□□□□ -1.33
RNU6-1249P-201ENST00000363237 ZMYND15Q9H091 742 aa6.77□□□□□ -1.33
RNU6-1249P-201ENST00000363237 AK7Q96M32 723 aa6.74□□□□□ -1.33
RNU6-1249P-201ENST00000363237 RSPH6AQ9H0K4 717 aa6.74□□□□□ -1.33
RNU6-1249P-201ENST00000363237 PSEN1P49768 467 aa6.73□□□□□ -1.33
RNU6-1249P-201ENST00000363237 NLRP6P59044 892 aa6.73□□□□□ -1.33
RNU6-1249P-201ENST00000363237 ARIH1Q9Y4X5 557 aaPredicted RBP6.73□□□□□ -1.33
RNU6-1249P-201ENST00000363237 UBTFP17480 764 aaKnown RBP6.72□□□□□ -1.33
RNU6-1249P-201ENST00000363237 PDE4AP27815 886 aa6.72□□□□□ -1.33
RNU6-1249P-201ENST00000363237 SOX12O15370 315 aa6.71□□□□□ -1.34
RNU6-1249P-201ENST00000363237 PPP1R37O75864 691 aa6.71□□□□□ -1.34
RNU6-1249P-201ENST00000363237 ZNF579Q8NAF0 562 aaKnown RBP6.71□□□□□ -1.34
RNU6-1249P-201ENST00000363237 TSPYL2Q9H2G4 693 aaPredicted RBP6.7□□□□□ -1.34
RNU6-1249P-201ENST00000363237 PCDHB8Q9UN66 801 aa6.7□□□□□ -1.34
RNU6-1249P-201ENST00000363237 PCDHB13Q9Y5F0 798 aa6.7□□□□□ -1.34
RNU6-1249P-201ENST00000363237 PRKAR2AP13861 404 aaKnown RBP6.69□□□□□ -1.34
RNU6-1249P-201ENST00000363237 KRI1Q8N9T8 703 aaKnown RBP6.69□□□□□ -1.34
RNU6-1249P-201ENST00000363237 FBXO22Q8NEZ5 403 aa6.69□□□□□ -1.34
RNU6-1249P-201ENST00000363237 MFSD10Q14728 455 aa6.68□□□□□ -1.34
RNU6-1249P-201ENST00000363237 IL27Q8NEV9 243 aa6.68□□□□□ -1.34
RNU6-1249P-201ENST00000363237 LARP6Q9BRS8 491 aaKnown RBP6.68□□□□□ -1.34
RNU6-1249P-201ENST00000363237 GPBP1L1Q9HC44 474 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1249P-201ENST00000363237 TRIM26Q12899 539 aaPredicted RBP6.66□□□□□ -1.34
RNU6-1249P-201ENST00000363237 GPIHBP1Q8IV16 184 aa6.66□□□□□ -1.34
RNU6-1249P-201ENST00000363237 EFCAB3Q8N7B9 438 aa6.66□□□□□ -1.34
RNU6-1249P-201ENST00000363237 KDM4CQ9H3R0 1056 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms