RNA–Protein interactions for RNA: ENST00000361762.3

PCDH7-201, Transcript of protocadherin 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH7, Length 6,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-201ENST00000361762 WDR43Q15061 677 aaKnown RBP eCLIP23.25■■□□□ 1.31
PCDH7-201ENST00000361762 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
PCDH7-201ENST00000361762 TSPY4P0CV99 314 aa23.22■■□□□ 1.31
PCDH7-201ENST00000361762 TSPY10P0CW01 314 aa23.22■■□□□ 1.31
PCDH7-201ENST00000361762 MTUS2Q5JR59 1369 aa23.17■■□□□ 1.3
PCDH7-201ENST00000361762 MRS2Q9HD23 443 aa23.16■■□□□ 1.3
PCDH7-201ENST00000361762 RGL3Q3MIN7 710 aa23.11■■□□□ 1.29
PCDH7-201ENST00000361762 PPP1R15AO75807 674 aaPredicted RBP23.11■■□□□ 1.29
PCDH7-201ENST00000361762 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
PCDH7-201ENST00000361762 LAS1LQ9Y4W2 734 aaKnown RBP23.08■■□□□ 1.29
PCDH7-201ENST00000361762 TRIM44Q96DX7 344 aaPredicted RBP23.08■■□□□ 1.29
PCDH7-201ENST00000361762 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.07■■□□□ 1.28
PCDH7-201ENST00000361762 ARID4BQ4LE39 1312 aaPredicted RBP23.06■■□□□ 1.28
PCDH7-201ENST00000361762 SUPT16HQ9Y5B9 1047 aaKnown RBP23.05■■□□□ 1.28
PCDH7-201ENST00000361762 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
PCDH7-201ENST00000361762 PPM1GO15355 546 aaPredicted RBP23■■□□□ 1.27
PCDH7-201ENST00000361762 DEKP35659 375 aaKnown RBP22.99■■□□□ 1.27
PCDH7-201ENST00000361762 TNNT2P45379 298 aaPredicted RBP22.98■■□□□ 1.27
PCDH7-201ENST00000361762 HAP1P54257 671 aaPredicted RBP22.97■■□□□ 1.27
PCDH7-201ENST00000361762 DDRGK1Q96HY6 314 aa22.97■■□□□ 1.27
PCDH7-201ENST00000361762 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.95■■□□□ 1.26
PCDH7-201ENST00000361762 TPRNQ4KMQ1 711 aa22.94■■□□□ 1.26
PCDH7-201ENST00000361762 MYH16Q9H6N6 1097 aa22.94■■□□□ 1.26
PCDH7-201ENST00000361762 ERICH6BQ5W0A0 696 aa22.93■■□□□ 1.26
PCDH7-201ENST00000361762 NOP58Q9Y2X3 529 aaKnown RBP22.93■■□□□ 1.26
PCDH7-201ENST00000361762 CLIP1P30622 1438 aa22.92■■□□□ 1.26
PCDH7-201ENST00000361762 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
PCDH7-201ENST00000361762 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
PCDH7-201ENST00000361762 EIF4G2P78344 907 aaKnown RBP eCLIP22.9■■□□□ 1.26
PCDH7-201ENST00000361762 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
PCDH7-201ENST00000361762 LMOD2Q6P5Q4 547 aa22.86■■□□□ 1.25
PCDH7-201ENST00000361762 BECN1Q14457 450 aa22.85■■□□□ 1.25
PCDH7-201ENST00000361762 NCLP19338 710 aaKnown RBP22.84■■□□□ 1.25
PCDH7-201ENST00000361762 NEUROD2Q15784 382 aa22.84■■□□□ 1.25
PCDH7-201ENST00000361762 DNTTIP2Q5QJE6 756 aaKnown RBP22.83■■□□□ 1.24
PCDH7-201ENST00000361762 TULP1O00294 542 aaPredicted RBP22.81■■□□□ 1.24
PCDH7-201ENST00000361762 TAOK2Q9UL54 1235 aa22.81■■□□□ 1.24
PCDH7-201ENST00000361762 RBM19Q9Y4C8 960 aaKnown RBP22.79■■□□□ 1.24
PCDH7-201ENST00000361762 PTMAP06454 111 aaKnown RBP22.78■■□□□ 1.24
PCDH7-201ENST00000361762 B4GALNT3Q6L9W6 998 aa22.78■■□□□ 1.24
PCDH7-201ENST00000361762 CFDP1Q9UEE9 299 aaPredicted RBP22.76■■□□□ 1.23
PCDH7-201ENST00000361762 CDK11BP21127 795 aaKnown RBP22.73■■□□□ 1.23
PCDH7-201ENST00000361762 PPP4R2Q9NY27 417 aa22.73■■□□□ 1.23
PCDH7-201ENST00000361762 CARD11Q9BXL7 1154 aa22.71■■□□□ 1.23
PCDH7-201ENST00000361762 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
PCDH7-201ENST00000361762 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
PCDH7-201ENST00000361762 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
PCDH7-201ENST00000361762 CEP162Q5TB80 1403 aa22.68■■□□□ 1.22
PCDH7-201ENST00000361762 CC2D1BQ5T0F9 858 aaKnown RBP22.68■■□□□ 1.22
PCDH7-201ENST00000361762 MLECQ14165 292 aa22.67■■□□□ 1.22
PCDH7-201ENST00000361762 CFAP53Q96M91 514 aa22.67■■□□□ 1.22
PCDH7-201ENST00000361762 GOLGA6L22H0YM25 854 aa22.67■■□□□ 1.22
PCDH7-201ENST00000361762 POGKQ9P215 609 aa22.67■■□□□ 1.22
PCDH7-201ENST00000361762 SOX12O15370 315 aa22.66■■□□□ 1.22
PCDH7-201ENST00000361762 SIN3AQ96ST3 1273 aa22.66■■□□□ 1.22
PCDH7-201ENST00000361762 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
PCDH7-201ENST00000361762 RGS3P49796 1198 aa22.65■■□□□ 1.22
PCDH7-201ENST00000361762 GOLGA3Q08378 1498 aa22.64■■□□□ 1.22
PCDH7-201ENST00000361762 FTSJ3Q8IY81 847 aaKnown RBP22.64■■□□□ 1.22
PCDH7-201ENST00000361762 TRHP20396 242 aaPredicted RBP22.63■■□□□ 1.21
PCDH7-201ENST00000361762 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
PCDH7-201ENST00000361762 NPHP1O15259 732 aa22.62■■□□□ 1.21
PCDH7-201ENST00000361762 ARID3AQ99856 593 aa22.61■■□□□ 1.21
PCDH7-201ENST00000361762 FRAT1Q92837 279 aaPredicted RBP22.59■■□□□ 1.21
PCDH7-201ENST00000361762 TSHZ2Q9NRE2 1034 aa22.59■■□□□ 1.21
PCDH7-201ENST00000361762 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
PCDH7-201ENST00000361762 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
PCDH7-201ENST00000361762 SAFB2Q14151 953 aaKnown RBP eCLIP22.57■■□□□ 1.2
PCDH7-201ENST00000361762 U2SURPO15042 1029 aaKnown RBP22.57■■□□□ 1.2
PCDH7-201ENST00000361762 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
PCDH7-201ENST00000361762 PLCB2Q00722 1185 aa22.55■■□□□ 1.2
PCDH7-201ENST00000361762 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
PCDH7-201ENST00000361762 SPRYD3Q8NCJ5 442 aa22.5■■□□□ 1.19
PCDH7-201ENST00000361762 CDCA8Q53HL2 280 aa22.5■■□□□ 1.19
PCDH7-201ENST00000361762 CASC1Q6TDU7 716 aa22.48■■□□□ 1.19
PCDH7-201ENST00000361762 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
PCDH7-201ENST00000361762 OS9Q13438 667 aaPredicted RBP22.46■■□□□ 1.19
PCDH7-201ENST00000361762 DCAF11Q8TEB1 546 aa22.45■■□□□ 1.18
PCDH7-201ENST00000361762 NAP1L2Q9ULW6 460 aaPredicted RBP22.44■■□□□ 1.18
PCDH7-201ENST00000361762 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
PCDH7-201ENST00000361762 ZRSR1Q15695 479 aaKnown RBP22.41■■□□□ 1.18
PCDH7-201ENST00000361762 STK26Q9P289 416 aa22.41■■□□□ 1.18
PCDH7-201ENST00000361762 MSNP26038 577 aaKnown RBP22.4■■□□□ 1.18
PCDH7-201ENST00000361762 SRPK2P78362 688 aaKnown RBP22.4■■□□□ 1.18
PCDH7-201ENST00000361762 HSP90AB1P08238 724 aaKnown RBP22.38■■□□□ 1.17
PCDH7-201ENST00000361762 CCNB3Q8WWL7 1395 aa22.38■■□□□ 1.17
PCDH7-201ENST00000361762 L1TD1Q5T7N2 865 aaKnown RBP22.38■■□□□ 1.17
PCDH7-201ENST00000361762 FOXD1Q16676 465 aa22.37■■□□□ 1.17
PCDH7-201ENST00000361762 GGT6Q6P531 493 aa22.35■■□□□ 1.17
PCDH7-201ENST00000361762 GZF1Q9H116 711 aaPredicted RBP22.33■■□□□ 1.17
PCDH7-201ENST00000361762 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.17
PCDH7-201ENST00000361762 FGD1P98174 961 aa22.32■■□□□ 1.16
PCDH7-201ENST00000361762 GOLGA2Q08379 1002 aa22.32■■□□□ 1.16
PCDH7-201ENST00000361762 EEA1Q15075 1411 aa22.31■■□□□ 1.16
PCDH7-201ENST00000361762 KCNJ4P48050 445 aa22.31■■□□□ 1.16
PCDH7-201ENST00000361762 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
PCDH7-201ENST00000361762 TMF1P82094 1093 aa22.28■■□□□ 1.16
PCDH7-201ENST00000361762 PAK3O75914 559 aaPredicted RBP22.28■■□□□ 1.16
PCDH7-201ENST00000361762 TNIKQ9UKE5 1360 aa22.27■■□□□ 1.16
PCDH7-201ENST00000361762 APBB1O00213 710 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms