RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 CHIC2Q9UKJ5 165 aa13.94□□□□□ -0.18
HIPK1-202ENST00000361587 CASC1Q6TDU7 716 aa13.92□□□□□ -0.18
HIPK1-202ENST00000361587 PPM1GO15355 546 aaPredicted RBP13.91□□□□□ -0.18
HIPK1-202ENST00000361587 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
HIPK1-202ENST00000361587 KDM2AQ9Y2K7 1162 aa13.9□□□□□ -0.18
HIPK1-202ENST00000361587 CDCA8Q53HL2 280 aa13.9□□□□□ -0.18
HIPK1-202ENST00000361587 ZRSR1Q15695 479 aaKnown RBP13.89□□□□□ -0.19
HIPK1-202ENST00000361587 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
HIPK1-202ENST00000361587 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
HIPK1-202ENST00000361587 MIER1Q8N108 512 aa13.88□□□□□ -0.19
HIPK1-202ENST00000361587 CLIP1P30622 1438 aa13.87□□□□□ -0.19
HIPK1-202ENST00000361587 ERICH6BQ5W0A0 696 aa13.86□□□□□ -0.19
HIPK1-202ENST00000361587 PTMAP06454 111 aaKnown RBP13.86□□□□□ -0.19
HIPK1-202ENST00000361587 EEA1Q15075 1411 aa13.85□□□□□ -0.19
HIPK1-202ENST00000361587 IRX6P78412 446 aaPredicted RBP13.85□□□□□ -0.19
HIPK1-202ENST00000361587 SCAF1Q9H7N4 1312 aaKnown RBP13.84□□□□□ -0.19
HIPK1-202ENST00000361587 CHMP4BQ9H444 224 aaKnown RBP13.83□□□□□ -0.2
HIPK1-202ENST00000361587 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
HIPK1-202ENST00000361587 FTSJ3Q8IY81 847 aaKnown RBP13.79□□□□□ -0.2
HIPK1-202ENST00000361587 PPP1R15AO75807 674 aaPredicted RBP13.79□□□□□ -0.2
HIPK1-202ENST00000361587 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
HIPK1-202ENST00000361587 GOLGA3Q08378 1498 aa13.79□□□□□ -0.2
HIPK1-202ENST00000361587 GOLGA6L6A8MZA4 724 aa13.79□□□□□ -0.2
HIPK1-202ENST00000361587 DNTTIP2Q5QJE6 756 aaKnown RBP13.79□□□□□ -0.2
HIPK1-202ENST00000361587 MS4A1P11836 297 aa13.78□□□□□ -0.2
HIPK1-202ENST00000361587 PPP4R2Q9NY27 417 aa13.76□□□□□ -0.21
HIPK1-202ENST00000361587 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
HIPK1-202ENST00000361587 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
HIPK1-202ENST00000361587 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
HIPK1-202ENST00000361587 NRDCO43847 1150 aa13.74□□□□□ -0.21
HIPK1-202ENST00000361587 MAPK8IP3Q9UPT6 1336 aa13.74□□□□□ -0.21
HIPK1-202ENST00000361587 MYO15BQ96JP2 1530 aa13.73□□□□□ -0.21
HIPK1-202ENST00000361587 PLEKHD1A6NEE1 506 aa13.72□□□□□ -0.21
HIPK1-202ENST00000361587 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
HIPK1-202ENST00000361587 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.21
HIPK1-202ENST00000361587 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.21
HIPK1-202ENST00000361587 A0A0G2JS52 829 aa13.71□□□□□ -0.22
HIPK1-202ENST00000361587 PNNQ9H307 717 aaKnown RBP13.7□□□□□ -0.22
HIPK1-202ENST00000361587 NAP1L5Q96NT1 182 aaPredicted RBP13.7□□□□□ -0.22
HIPK1-202ENST00000361587 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
HIPK1-202ENST00000361587 CEP162Q5TB80 1403 aa13.7□□□□□ -0.22
HIPK1-202ENST00000361587 CFAP44Q96MT7 982 aa13.69□□□□□ -0.22
HIPK1-202ENST00000361587 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
HIPK1-202ENST00000361587 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
HIPK1-202ENST00000361587 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
HIPK1-202ENST00000361587 L1TD1Q5T7N2 865 aaKnown RBP13.66□□□□□ -0.22
HIPK1-202ENST00000361587 NACADO15069 1562 aa13.65□□□□□ -0.22
HIPK1-202ENST00000361587 CHAF1AQ13111 956 aaPredicted RBP13.65□□□□□ -0.22
HIPK1-202ENST00000361587 RGL3Q3MIN7 710 aa13.64□□□□□ -0.23
HIPK1-202ENST00000361587 CFDP1Q9UEE9 299 aaPredicted RBP13.63□□□□□ -0.23
HIPK1-202ENST00000361587 HAP1P54257 671 aaPredicted RBP13.63□□□□□ -0.23
HIPK1-202ENST00000361587 HSCBQ8IWL3 235 aa13.62□□□□□ -0.23
HIPK1-202ENST00000361587 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
HIPK1-202ENST00000361587 LAS1LQ9Y4W2 734 aaKnown RBP13.61□□□□□ -0.23
HIPK1-202ENST00000361587 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
HIPK1-202ENST00000361587 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
HIPK1-202ENST00000361587 PTMSP20962 102 aa13.61□□□□□ -0.23
HIPK1-202ENST00000361587 FGD1P98174 961 aa13.61□□□□□ -0.23
HIPK1-202ENST00000361587 RGS3P49796 1198 aa13.6□□□□□ -0.23
HIPK1-202ENST00000361587 MCCP23508 829 aa13.6□□□□□ -0.23
HIPK1-202ENST00000361587 PLCB2Q00722 1185 aa13.6□□□□□ -0.23
HIPK1-202ENST00000361587 OS9Q13438 667 aaPredicted RBP13.59□□□□□ -0.23
HIPK1-202ENST00000361587 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
HIPK1-202ENST00000361587 GOLGA6L4A6NEF3 574 aa13.59□□□□□ -0.23
HIPK1-202ENST00000361587 KIF27Q86VH2 1401 aa13.59□□□□□ -0.23
HIPK1-202ENST00000361587 FRAT1Q92837 279 aaPredicted RBP13.58□□□□□ -0.24
HIPK1-202ENST00000361587 KCNH8Q96L42 1107 aa13.58□□□□□ -0.24
HIPK1-202ENST00000361587 MSNP26038 577 aaKnown RBP13.58□□□□□ -0.24
HIPK1-202ENST00000361587 KCNJ4P48050 445 aa13.58□□□□□ -0.24
HIPK1-202ENST00000361587 POGKQ9P215 609 aa13.57□□□□□ -0.24
HIPK1-202ENST00000361587 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
HIPK1-202ENST00000361587 TMF1P82094 1093 aa13.56□□□□□ -0.24
HIPK1-202ENST00000361587 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
HIPK1-202ENST00000361587 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
HIPK1-202ENST00000361587 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
HIPK1-202ENST00000361587 FHAD1B1AJZ9 1412 aa13.52□□□□□ -0.25
HIPK1-202ENST00000361587 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
HIPK1-202ENST00000361587 KANK1Q14678 1352 aa13.51□□□□□ -0.25
HIPK1-202ENST00000361587 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
HIPK1-202ENST00000361587 U2SURPO15042 1029 aaKnown RBP13.5□□□□□ -0.25
HIPK1-202ENST00000361587 ARID4BQ4LE39 1312 aaPredicted RBP13.5□□□□□ -0.25
HIPK1-202ENST00000361587 CC2D1BQ5T0F9 858 aaKnown RBP13.5□□□□□ -0.25
HIPK1-202ENST00000361587 NAP1L2Q9ULW6 460 aaPredicted RBP13.49□□□□□ -0.25
HIPK1-202ENST00000361587 NPHP1O15259 732 aa13.48□□□□□ -0.25
HIPK1-202ENST00000361587 HDGFP51858 240 aaKnown RBP13.48□□□□□ -0.25
HIPK1-202ENST00000361587 GBP4Q96PP9 640 aa13.48□□□□□ -0.25
HIPK1-202ENST00000361587 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
HIPK1-202ENST00000361587 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
HIPK1-202ENST00000361587 DRC7Q8IY82 874 aa13.47□□□□□ -0.25
HIPK1-202ENST00000361587 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
HIPK1-202ENST00000361587 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
HIPK1-202ENST00000361587 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
HIPK1-202ENST00000361587 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
HIPK1-202ENST00000361587 SENP3Q9H4L4 574 aaPredicted RBP13.46□□□□□ -0.25
HIPK1-202ENST00000361587 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
HIPK1-202ENST00000361587 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
HIPK1-202ENST00000361587 DEKP35659 375 aaKnown RBP13.44□□□□□ -0.26
HIPK1-202ENST00000361587 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
HIPK1-202ENST00000361587 KIAA2012Q0VF49 1180 aa13.44□□□□□ -0.26
HIPK1-202ENST00000361587 SYAP1Q96A49 352 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms