RNA–Protein interactions for RNA: ENST00000361427.5

HMGN2-201, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-201ENST00000361427 POTEB2H3BUK9 544 aa14.11□□□□□ -0.15
HMGN2-201ENST00000361427 PLSCR2Q9NRY7 297 aa14.11□□□□□ -0.15
HMGN2-201ENST00000361427 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
HMGN2-201ENST00000361427 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
HMGN2-201ENST00000361427 MNX1P50219 401 aaPredicted RBP14.03□□□□□ -0.16
HMGN2-201ENST00000361427 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
HMGN2-201ENST00000361427 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
HMGN2-201ENST00000361427 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
HMGN2-201ENST00000361427 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
HMGN2-201ENST00000361427 POTEMA6NI47 508 aa13.88□□□□□ -0.19
HMGN2-201ENST00000361427 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
HMGN2-201ENST00000361427 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
HMGN2-201ENST00000361427 POTEJP0CG39 1038 aa13.85□□□□□ -0.19
HMGN2-201ENST00000361427 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
HMGN2-201ENST00000361427 ATMINO43313 823 aaPredicted RBP13.84□□□□□ -0.19
HMGN2-201ENST00000361427 POTEGQ6S5H5 508 aa13.84□□□□□ -0.19
HMGN2-201ENST00000361427 METRNQ9UJH8 293 aa13.83□□□□□ -0.2
HMGN2-201ENST00000361427 C7P10643 843 aa13.81□□□□□ -0.2
HMGN2-201ENST00000361427 SLC39A7Q92504 469 aa13.79□□□□□ -0.2
HMGN2-201ENST00000361427 FKBP8Q14318 412 aa13.78□□□□□ -0.2
HMGN2-201ENST00000361427 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
HMGN2-201ENST00000361427 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
HMGN2-201ENST00000361427 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
HMGN2-201ENST00000361427 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
HMGN2-201ENST00000361427 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
HMGN2-201ENST00000361427 PROM2Q8N271 834 aa13.7□□□□□ -0.22
HMGN2-201ENST00000361427 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
HMGN2-201ENST00000361427 PCDH10Q9P2E7 1040 aa13.69□□□□□ -0.22
HMGN2-201ENST00000361427 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
HMGN2-201ENST00000361427 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
HMGN2-201ENST00000361427 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
HMGN2-201ENST00000361427 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
HMGN2-201ENST00000361427 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
HMGN2-201ENST00000361427 BMP2KQ9NSY1 1161 aaPredicted RBP13.59□□□□□ -0.23
HMGN2-201ENST00000361427 SCUBE2Q9NQ36 999 aa13.58□□□□□ -0.24
HMGN2-201ENST00000361427 MAP3K13O43283 966 aa13.55□□□□□ -0.24
HMGN2-201ENST00000361427 TIE1P35590 1138 aa13.52□□□□□ -0.25
HMGN2-201ENST00000361427 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
HMGN2-201ENST00000361427 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
HMGN2-201ENST00000361427 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
HMGN2-201ENST00000361427 MIER1Q8N108 512 aa13.46□□□□□ -0.25
HMGN2-201ENST00000361427 TTLL13PA6NNM8 815 aa13.44□□□□□ -0.26
HMGN2-201ENST00000361427 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
HMGN2-201ENST00000361427 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
HMGN2-201ENST00000361427 SEC24BO95487 1268 aa13.38□□□□□ -0.27
HMGN2-201ENST00000361427 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
HMGN2-201ENST00000361427 IER5LQ5T953 404 aa13.34□□□□□ -0.27
HMGN2-201ENST00000361427 TRIM35Q9UPQ4 493 aa13.34□□□□□ -0.27
HMGN2-201ENST00000361427 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
HMGN2-201ENST00000361427 PCDHB13Q9Y5F0 798 aa13.31□□□□□ -0.28
HMGN2-201ENST00000361427 CDAN1Q8IWY9 1227 aa13.3□□□□□ -0.28
HMGN2-201ENST00000361427 NUBP1P53384 320 aa13.29□□□□□ -0.28
HMGN2-201ENST00000361427 PLCB2Q00722 1185 aa13.28□□□□□ -0.28
HMGN2-201ENST00000361427 IFNL1Q8IU54 200 aa13.26□□□□□ -0.29
HMGN2-201ENST00000361427 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
HMGN2-201ENST00000361427 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
HMGN2-201ENST00000361427 ST18O60284 1047 aa13.22□□□□□ -0.29
HMGN2-201ENST00000361427 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
HMGN2-201ENST00000361427 TMEM106CQ9BVX2 250 aa13.19□□□□□ -0.3
HMGN2-201ENST00000361427 NCAPD3P42695 1498 aa13.18□□□□□ -0.3
HMGN2-201ENST00000361427 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
HMGN2-201ENST00000361427 BAZ1AQ9NRL2 1556 aaPredicted RBP13.18□□□□□ -0.3
HMGN2-201ENST00000361427 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
HMGN2-201ENST00000361427 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
HMGN2-201ENST00000361427 BCANQ96GW7 911 aa13.14□□□□□ -0.31
HMGN2-201ENST00000361427 PLCG2P16885 1265 aa13.13□□□□□ -0.31
HMGN2-201ENST00000361427 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
HMGN2-201ENST00000361427 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
HMGN2-201ENST00000361427 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
HMGN2-201ENST00000361427 FAM212AQ96EL1 285 aa13.12□□□□□ -0.31
HMGN2-201ENST00000361427 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
HMGN2-201ENST00000361427 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
HMGN2-201ENST00000361427 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
HMGN2-201ENST00000361427 PRKCSHP14314 528 aaPredicted RBP13.02□□□□□ -0.33
HMGN2-201ENST00000361427 TMEM121BQ9BXQ6 578 aaPredicted RBP13.02□□□□□ -0.33
HMGN2-201ENST00000361427 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
HMGN2-201ENST00000361427 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.33
HMGN2-201ENST00000361427 SPNS2Q8IVW8 549 aa13.01□□□□□ -0.33
HMGN2-201ENST00000361427 MMRN1Q13201 1228 aa13□□□□□ -0.33
HMGN2-201ENST00000361427 PYGBP11216 843 aa12.99□□□□□ -0.33
HMGN2-201ENST00000361427 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
HMGN2-201ENST00000361427 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
HMGN2-201ENST00000361427 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
HMGN2-201ENST00000361427 SNPHO15079 494 aa12.97□□□□□ -0.33
HMGN2-201ENST00000361427 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
HMGN2-201ENST00000361427 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
HMGN2-201ENST00000361427 WIZO95785 1651 aa12.96□□□□□ -0.34
HMGN2-201ENST00000361427 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
HMGN2-201ENST00000361427 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
HMGN2-201ENST00000361427 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
HMGN2-201ENST00000361427 NESP48681 1621 aa12.84□□□□□ -0.35
HMGN2-201ENST00000361427 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
HMGN2-201ENST00000361427 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
HMGN2-201ENST00000361427 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
HMGN2-201ENST00000361427 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
HMGN2-201ENST00000361427 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
HMGN2-201ENST00000361427 VASPP50552 380 aaPredicted RBP12.78□□□□□ -0.36
HMGN2-201ENST00000361427 EMP3P54852 163 aa12.78□□□□□ -0.36
HMGN2-201ENST00000361427 TPRNQ4KMQ1 711 aa12.78□□□□□ -0.36
HMGN2-201ENST00000361427 C3orf67Q6ZVT6 689 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms