RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 RSF1Q96T23 1441 aaPredicted RBP26.79■■□□□ 1.88
SMURF1-202ENST00000361368 NCLP19338 710 aaKnown RBP26.79■■□□□ 1.88
SMURF1-202ENST00000361368 CDCA8Q53HL2 280 aa26.79■■□□□ 1.88
SMURF1-202ENST00000361368 GLIPR1L2Q4G1C9 344 aa26.79■■□□□ 1.88
SMURF1-202ENST00000361368 KCNH8Q96L42 1107 aa26.79■■□□□ 1.88
SMURF1-202ENST00000361368 ARID4BQ4LE39 1312 aaPredicted RBP26.75■■□□□ 1.87
SMURF1-202ENST00000361368 PLEKHG5O94827 1062 aa26.74■■□□□ 1.87
SMURF1-202ENST00000361368 BECN1Q14457 450 aa26.71■■□□□ 1.87
SMURF1-202ENST00000361368 RRP7BPQ9NSQ0 103 aa26.67■■□□□ 1.86
SMURF1-202ENST00000361368 ANP32EQ9BTT0 268 aa26.66■■□□□ 1.86
SMURF1-202ENST00000361368 GOLGA6L22H0YM25 854 aa26.65■■□□□ 1.86
SMURF1-202ENST00000361368 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
SMURF1-202ENST00000361368 CLIP1P30622 1438 aa26.65■■□□□ 1.86
SMURF1-202ENST00000361368 DDRGK1Q96HY6 314 aa26.64■■□□□ 1.86
SMURF1-202ENST00000361368 CASC1Q6TDU7 716 aa26.63■■□□□ 1.85
SMURF1-202ENST00000361368 ARXQ96QS3 562 aa26.62■■□□□ 1.85
SMURF1-202ENST00000361368 ZRSR1Q15695 479 aaKnown RBP26.61■■□□□ 1.85
SMURF1-202ENST00000361368 KNSTRNQ9Y448 316 aa26.61■■□□□ 1.85
SMURF1-202ENST00000361368 SENP3Q9H4L4 574 aaPredicted RBP26.59■■□□□ 1.85
SMURF1-202ENST00000361368 NBR1Q14596 966 aa26.57■■□□□ 1.84
SMURF1-202ENST00000361368 RGL3Q3MIN7 710 aa26.57■■□□□ 1.84
SMURF1-202ENST00000361368 CFDP1Q9UEE9 299 aaPredicted RBP26.55■■□□□ 1.84
SMURF1-202ENST00000361368 NUDCQ9Y266 331 aa26.54■■□□□ 1.84
SMURF1-202ENST00000361368 MAPK8IP3Q9UPT6 1336 aa26.52■■□□□ 1.84
SMURF1-202ENST00000361368 PPM1GO15355 546 aaPredicted RBP26.51■■□□□ 1.83
SMURF1-202ENST00000361368 FTSJ3Q8IY81 847 aaKnown RBP26.49■■□□□ 1.83
SMURF1-202ENST00000361368 EEA1Q15075 1411 aa26.49■■□□□ 1.83
SMURF1-202ENST00000361368 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
SMURF1-202ENST00000361368 POGKQ9P215 609 aa26.48■■□□□ 1.83
SMURF1-202ENST00000361368 CHMP4BQ9H444 224 aaKnown RBP26.48■■□□□ 1.83
SMURF1-202ENST00000361368 TRIM44Q96DX7 344 aaPredicted RBP26.48■■□□□ 1.83
SMURF1-202ENST00000361368 NPHP1O15259 732 aa26.47■■□□□ 1.83
SMURF1-202ENST00000361368 LMOD2Q6P5Q4 547 aa26.44■■□□□ 1.82
SMURF1-202ENST00000361368 CARD11Q9BXL7 1154 aa26.43■■□□□ 1.82
SMURF1-202ENST00000361368 HIRIP3Q9BW71 556 aaPredicted RBP26.42■■□□□ 1.82
SMURF1-202ENST00000361368 IRX6P78412 446 aaPredicted RBP26.41■■□□□ 1.82
SMURF1-202ENST00000361368 GOLGA3Q08378 1498 aa26.41■■□□□ 1.82
SMURF1-202ENST00000361368 PNNQ9H307 717 aaKnown RBP26.39■■□□□ 1.82
SMURF1-202ENST00000361368 HDGFP51858 240 aaKnown RBP26.37■■□□□ 1.81
SMURF1-202ENST00000361368 MS4A1P11836 297 aa26.36■■□□□ 1.81
SMURF1-202ENST00000361368 RB1CC1Q8TDY2 1594 aa26.36■■□□□ 1.81
SMURF1-202ENST00000361368 LAS1LQ9Y4W2 734 aaKnown RBP26.35■■□□□ 1.81
SMURF1-202ENST00000361368 PTMAP06454 111 aaKnown RBP26.33■■□□□ 1.81
SMURF1-202ENST00000361368 KIF27Q86VH2 1401 aa26.3■■□□□ 1.8
SMURF1-202ENST00000361368 MIER1Q8N108 512 aa26.3■■□□□ 1.8
SMURF1-202ENST00000361368 OS9Q13438 667 aaPredicted RBP26.29■■□□□ 1.8
SMURF1-202ENST00000361368 GOLGA2Q08379 1002 aa26.27■■□□□ 1.8
SMURF1-202ENST00000361368 NEUROD2Q15784 382 aa26.27■■□□□ 1.8
SMURF1-202ENST00000361368 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
SMURF1-202ENST00000361368 KANK1Q14678 1352 aa26.26■■□□□ 1.79
SMURF1-202ENST00000361368 TULP1O00294 542 aaPredicted RBP26.26■■□□□ 1.79
SMURF1-202ENST00000361368 FGD1P98174 961 aa26.24■■□□□ 1.79
SMURF1-202ENST00000361368 GOLGA6L6A8MZA4 724 aa26.22■■□□□ 1.79
SMURF1-202ENST00000361368 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.792e-8■■■■■ 75.2
SMURF1-202ENST00000361368 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.79
SMURF1-202ENST00000361368 CEP162Q5TB80 1403 aa26.2■■□□□ 1.78
SMURF1-202ENST00000361368 KCNJ4P48050 445 aa26.17■■□□□ 1.78
SMURF1-202ENST00000361368 U2SURPO15042 1029 aaKnown RBP26.17■■□□□ 1.78
SMURF1-202ENST00000361368 CCNB3Q8WWL7 1395 aa26.16■■□□□ 1.78
SMURF1-202ENST00000361368 DNTTIP2Q5QJE6 756 aaKnown RBP26.15■■□□□ 1.78
SMURF1-202ENST00000361368 FRAT1Q92837 279 aaPredicted RBP26.15■■□□□ 1.78
SMURF1-202ENST00000361368 TMF1P82094 1093 aa26.14■■□□□ 1.78
SMURF1-202ENST00000361368 TNNT2P45379 298 aaPredicted RBP26.14■■□□□ 1.77
SMURF1-202ENST00000361368 NRDCO43847 1150 aa26.14■■□□□ 1.77
SMURF1-202ENST00000361368 TRHP20396 242 aaPredicted RBP26.13■■□□□ 1.77
SMURF1-202ENST00000361368 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
SMURF1-202ENST00000361368 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
SMURF1-202ENST00000361368 TPRNQ4KMQ1 711 aa26.09■■□□□ 1.77
SMURF1-202ENST00000361368 NAP1L2Q9ULW6 460 aaPredicted RBP26.06■■□□□ 1.76
SMURF1-202ENST00000361368 HSP90AB1P08238 724 aaKnown RBP26.06■■□□□ 1.76
SMURF1-202ENST00000361368 CFAP44Q96MT7 982 aa26.06■■□□□ 1.76
SMURF1-202ENST00000361368 CC2D1BQ5T0F9 858 aaKnown RBP26.05■■□□□ 1.76
SMURF1-202ENST00000361368 SRPK2P78362 688 aaKnown RBP26.04■■□□□ 1.76
SMURF1-202ENST00000361368 TAOK2Q9UL54 1235 aa26.03■■□□□ 1.76
SMURF1-202ENST00000361368 TNIKQ9UKE5 1360 aa26.03■■□□□ 1.76
SMURF1-202ENST00000361368 RGS3P49796 1198 aa26.02■■□□□ 1.76
SMURF1-202ENST00000361368 GOLGA6L4A6NEF3 574 aa26.02■■□□□ 1.76
SMURF1-202ENST00000361368 MCCP23508 829 aa26.02■■□□□ 1.76
SMURF1-202ENST00000361368 SUPT16HQ9Y5B9 1047 aaKnown RBP26.02■■□□□ 1.76
SMURF1-202ENST00000361368 FHAD1B1AJZ9 1412 aa26.01■■□□□ 1.75
SMURF1-202ENST00000361368 RTF1Q92541 710 aaKnown RBP26.01■■□□□ 1.75
SMURF1-202ENST00000361368 PPP4R2Q9NY27 417 aa26■■□□□ 1.75
SMURF1-202ENST00000361368 PLCB2Q00722 1185 aa25.99■■□□□ 1.75
SMURF1-202ENST00000361368 MLECQ14165 292 aa25.99■■□□□ 1.75
SMURF1-202ENST00000361368 ERICH6BQ5W0A0 696 aa25.99■■□□□ 1.75
SMURF1-202ENST00000361368 MORC1Q86VD1 984 aa25.97■■□□□ 1.75
SMURF1-202ENST00000361368 DCAF11Q8TEB1 546 aa25.97■■□□□ 1.75
SMURF1-202ENST00000361368 SENP3-EIF4A1A0A087X0R7 540 aa25.97■■□□□ 1.75
SMURF1-202ENST00000361368 HDGFL2Q7Z4V5 671 aaPredicted RBP25.94■■□□□ 1.74
SMURF1-202ENST00000361368 SOX12O15370 315 aa25.91■■□□□ 1.74
SMURF1-202ENST00000361368 HSCBQ8IWL3 235 aa25.91■■□□□ 1.74
SMURF1-202ENST00000361368 CHMP4AQ9BY43 222 aa25.91■■□□□ 1.74
SMURF1-202ENST00000361368 NACADO15069 1562 aa25.9■■□□□ 1.74
SMURF1-202ENST00000361368 CLSTN1O94985 981 aa25.89■■□□□ 1.73
SMURF1-202ENST00000361368 ISY1Q9ULR0 285 aaKnown RBP25.89■■□□□ 1.73
SMURF1-202ENST00000361368 CALD1Q05682 793 aaKnown RBP25.88■■□□□ 1.73
SMURF1-202ENST00000361368 L1TD1Q5T7N2 865 aaKnown RBP25.88■■□□□ 1.73
SMURF1-202ENST00000361368 TIMELESSQ9UNS1 1208 aa25.88■■□□□ 1.73
SMURF1-202ENST00000361368 SIN3AQ96ST3 1273 aa25.86■■□□□ 1.73
SMURF1-202ENST00000361368 TMX4Q9H1E5 349 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms