RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 CLIP1P30622 1438 aa16.27■□□□□ 0.19
CCDC144A-204ENST00000360524 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
CCDC144A-204ENST00000360524 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
CCDC144A-204ENST00000360524 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.25■□□□□ 0.19
CCDC144A-204ENST00000360524 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.19
CCDC144A-204ENST00000360524 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
CCDC144A-204ENST00000360524 RRP7BPQ9NSQ0 103 aa16.18■□□□□ 0.18
CCDC144A-204ENST00000360524 TNNT2P45379 298 aaPredicted RBP16.18■□□□□ 0.18
CCDC144A-204ENST00000360524 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
CCDC144A-204ENST00000360524 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
CCDC144A-204ENST00000360524 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
CCDC144A-204ENST00000360524 EEA1Q15075 1411 aa16.16■□□□□ 0.18
CCDC144A-204ENST00000360524 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
CCDC144A-204ENST00000360524 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.17
CCDC144A-204ENST00000360524 TRIM44Q96DX7 344 aaPredicted RBP16.13■□□□□ 0.17
CCDC144A-204ENST00000360524 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
CCDC144A-204ENST00000360524 BAZ1BQ9UIG0 1483 aaKnown RBP16.12■□□□□ 0.17
CCDC144A-204ENST00000360524 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
CCDC144A-204ENST00000360524 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
CCDC144A-204ENST00000360524 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
CCDC144A-204ENST00000360524 MYH16Q9H6N6 1097 aa16.09■□□□□ 0.17
CCDC144A-204ENST00000360524 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
CCDC144A-204ENST00000360524 NAP1L5Q96NT1 182 aaPredicted RBP16.09■□□□□ 0.17
CCDC144A-204ENST00000360524 NACADO15069 1562 aa16.08■□□□□ 0.16
CCDC144A-204ENST00000360524 TPRNQ4KMQ1 711 aa16.07■□□□□ 0.16
CCDC144A-204ENST00000360524 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
CCDC144A-204ENST00000360524 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
CCDC144A-204ENST00000360524 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
CCDC144A-204ENST00000360524 A0A0G2JS52 829 aa16.05■□□□□ 0.16
CCDC144A-204ENST00000360524 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
CCDC144A-204ENST00000360524 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
CCDC144A-204ENST00000360524 NCLP19338 710 aaKnown RBP16.03■□□□□ 0.16
CCDC144A-204ENST00000360524 RGL3Q3MIN7 710 aa16.03■□□□□ 0.16
CCDC144A-204ENST00000360524 SUPT16HQ9Y5B9 1047 aaKnown RBP16.02■□□□□ 0.16
CCDC144A-204ENST00000360524 BECN1Q14457 450 aa16.02■□□□□ 0.15
CCDC144A-204ENST00000360524 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
CCDC144A-204ENST00000360524 PPM1GO15355 546 aaPredicted RBP15.99■□□□□ 0.15
CCDC144A-204ENST00000360524 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
CCDC144A-204ENST00000360524 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
CCDC144A-204ENST00000360524 CDCA8Q53HL2 280 aa15.98■□□□□ 0.15
CCDC144A-204ENST00000360524 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
CCDC144A-204ENST00000360524 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
CCDC144A-204ENST00000360524 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
CCDC144A-204ENST00000360524 NOP58Q9Y2X3 529 aaKnown RBP15.96■□□□□ 0.14
CCDC144A-204ENST00000360524 TNIKQ9UKE5 1360 aa15.96■□□□□ 0.14
CCDC144A-204ENST00000360524 CDK11BP21127 795 aaKnown RBP15.95■□□□□ 0.14
CCDC144A-204ENST00000360524 KNSTRNQ9Y448 316 aa15.93■□□□□ 0.14
CCDC144A-204ENST00000360524 CARD11Q9BXL7 1154 aa15.92■□□□□ 0.14
CCDC144A-204ENST00000360524 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
CCDC144A-204ENST00000360524 PTMAP06454 111 aaKnown RBP15.91■□□□□ 0.14
CCDC144A-204ENST00000360524 GOLGA6L22H0YM25 854 aa15.9■□□□□ 0.14
CCDC144A-204ENST00000360524 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
CCDC144A-204ENST00000360524 DNTTIP2Q5QJE6 756 aaKnown RBP15.9■□□□□ 0.14
CCDC144A-204ENST00000360524 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
CCDC144A-204ENST00000360524 RGS3P49796 1198 aa15.87■□□□□ 0.13
CCDC144A-204ENST00000360524 FTSJ3Q8IY81 847 aaKnown RBP15.87■□□□□ 0.13
CCDC144A-204ENST00000360524 TAOK2Q9UL54 1235 aa15.86■□□□□ 0.13
CCDC144A-204ENST00000360524 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
CCDC144A-204ENST00000360524 CCNB3Q8WWL7 1395 aa15.84■□□□□ 0.13
CCDC144A-204ENST00000360524 POGKQ9P215 609 aa15.84■□□□□ 0.13
CCDC144A-204ENST00000360524 TULP1O00294 542 aaPredicted RBP15.83■□□□□ 0.12
CCDC144A-204ENST00000360524 FRAT1Q92837 279 aaPredicted RBP15.83■□□□□ 0.12
CCDC144A-204ENST00000360524 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
CCDC144A-204ENST00000360524 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
CCDC144A-204ENST00000360524 CC2D1BQ5T0F9 858 aaKnown RBP15.82■□□□□ 0.12
CCDC144A-204ENST00000360524 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
CCDC144A-204ENST00000360524 EIF4G1Q04637 1599 aaKnown RBP15.82■□□□□ 0.12
CCDC144A-204ENST00000360524 MAPK8IP3Q9UPT6 1336 aa15.82■□□□□ 0.12
CCDC144A-204ENST00000360524 B4GALNT3Q6L9W6 998 aa15.81■□□□□ 0.12
CCDC144A-204ENST00000360524 FHAD1B1AJZ9 1412 aa15.81■□□□□ 0.12
CCDC144A-204ENST00000360524 NUDCQ9Y266 331 aa15.81■□□□□ 0.12
CCDC144A-204ENST00000360524 PLCB2Q00722 1185 aa15.8■□□□□ 0.12
CCDC144A-204ENST00000360524 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
CCDC144A-204ENST00000360524 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
CCDC144A-204ENST00000360524 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.12
CCDC144A-204ENST00000360524 RBM19Q9Y4C8 960 aaKnown RBP15.77■□□□□ 0.12
CCDC144A-204ENST00000360524 CUX2O14529 1486 aa15.77■□□□□ 0.11
CCDC144A-204ENST00000360524 KANK1Q14678 1352 aa15.76■□□□□ 0.11
CCDC144A-204ENST00000360524 LMOD2Q6P5Q4 547 aa15.76■□□□□ 0.11
CCDC144A-204ENST00000360524 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
CCDC144A-204ENST00000360524 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
CCDC144A-204ENST00000360524 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
CCDC144A-204ENST00000360524 TMF1P82094 1093 aa15.7■□□□□ 0.1
CCDC144A-204ENST00000360524 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
CCDC144A-204ENST00000360524 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-204ENST00000360524 PNNQ9H307 717 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-204ENST00000360524 HDGFP51858 240 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-204ENST00000360524 U2SURPO15042 1029 aaKnown RBP15.68■□□□□ 0.1
CCDC144A-204ENST00000360524 CHMP4BQ9H444 224 aaKnown RBP15.67■□□□□ 0.1
CCDC144A-204ENST00000360524 SOGA1O94964 1423 aa15.67■□□□□ 0.1
CCDC144A-204ENST00000360524 NAP1L2Q9ULW6 460 aaPredicted RBP15.67■□□□□ 0.1
CCDC144A-204ENST00000360524 OS9Q13438 667 aaPredicted RBP15.66■□□□□ 0.1
CCDC144A-204ENST00000360524 MLECQ14165 292 aa15.65■□□□□ 0.1
CCDC144A-204ENST00000360524 MS4A1P11836 297 aa15.65■□□□□ 0.1
CCDC144A-204ENST00000360524 MSNP26038 577 aaKnown RBP15.65■□□□□ 0.1
CCDC144A-204ENST00000360524 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.09
CCDC144A-204ENST00000360524 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
CCDC144A-204ENST00000360524 SRPK2P78362 688 aaKnown RBP15.62■□□□□ 0.09
CCDC144A-204ENST00000360524 CARMIL2Q6F5E8 1435 aa15.62■□□□□ 0.09
CCDC144A-204ENST00000360524 NPHP1O15259 732 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms